source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	47296992	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B131
lof_cds	Chr5	47297006	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	151	A1,A10,A11,A15,A20,A22,A23,A24,A3,A5,A8,A9,B1,B100,B101,B102,B103,B106,B107,B108,B109,B11,B110,B115,B120,B122,B125,B127,B13,B132,B133,B134,B135,B136,B139,B140,B16,B17,B18,B19,B20,B21,B22,B24,B27,B29,B30,B31,B34,B35,B36,B38,B39,B40,B44,B5,B51,B53,B54,B55,B56,B57,B59,B6,B61,B63,B66,B67,B68,B69,B72,B73,B74,B76,B8,B80,B83,B87,B88,B89,B90,B91,B92,B93,B96,B97,B99,C1,C10,C13,C14,C16,C17,C18,C2,C20,C21,C22,C23,C29,C3,C30,C32,C34,C36,C37,C39,C4,C41,C42,C43,C44,C45,C47,C48,C49,C5,C50,C52,C53,C54,C55,C58,C60,C61,C64,C65,C66,C67,C68,C71,C72,C73,C74,C76,C78,C79,C82,C83,C84,C86,C87,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr5	47297009	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	B78,C1,C28,C8
typical_cds_rare	Chr5	47297013	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	B78,C1,C28,C8
typical_cds_rare	Chr5	47297027	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	B135,C28
lof_cds	Chr5	47297062	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	9	B118,B127,B140,B5,B79,C71,C75,C79,D4
typical_cds_rare	Chr5	47297079	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	B125,B83,B90,C87
typical_cds_rare	Chr5	47297099	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	B53,C36
typical_cds_rare	Chr5	47297104	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B35
typical_cds_rare	Chr5	47297111	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	C32,C68
typical_cds_rare	Chr5	47297124	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B131
typical_cds_rare	Chr5	47297138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	5	B125,B140,B90,B92,C87
typical_cds_rare	Chr5	47297156	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B131,B55,B66
typical_cds_rare	Chr5	47297160	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B131,B55,B99
typical_cds_rare	Chr5	47297164	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	C43,C76,D4
typical_cds_rare	Chr5	47297542	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B125,B13,C73
lof_cds	Chr5	47297560	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	C86
typical_cds_rare	Chr5	47297560	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	C86
typical_cds_rare	Chr5	47297566	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	A2,B70,B82,C78
typical_cds_rare	Chr5	47297570	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B27,B53,B66
lof_cds	Chr5	47297586	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	19	A20,A9,B110,B114,B12,B37,B78,C1,C13,C21,C38,C54,C61,C65,C68,C72,C83,D4,D8
lof_cds	Chr5	47297590	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B126,C64,C66
typical_cds_rare	Chr5	47297590	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B126,C64,C66
lof_cds	Chr5	47297593	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B126,C64,C66
typical_cds_rare	Chr5	47297593	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B126,C64,C66
lof_cds	Chr5	47297612	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	D4
typical_cds_rare	Chr5	47297612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	D4
typical_cds_rare	Chr5	47297614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	C73
typical_cds_rare	Chr5	47297632	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B17
typical_cds_rare	Chr5	47297638	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	5	A1,B105,B129,B132,C12
typical_cds_rare	Chr5	47297649	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	5	C1,C39,C43,C76,D4
lof_cds	Chr5	47297670	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B135,B74,B77
typical_cds_rare	Chr5	47297670	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B135,B74,B77
typical_cds_rare	Chr5	47297697	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	A2,B70,B82,C78
typical_cds_rare	Chr5	47297703	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	C52
lof_cds	Chr5	47297705	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	A7,B115,C13,C49
typical_cds_rare	Chr5	47297705	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	A7,B115,C13,C49
typical_cds_rare	Chr5	47297713	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	C11,C69
lof_cds	Chr5	47297744	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	18	A24,A7,B104,B136,B36,B48,B50,B72,B79,B90,B92,C35,C45,C48,C49,C54,C63,C77
typical_cds_rare	Chr5	47297763	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B100,B66,C35
typical_cds_rare	Chr5	47297769	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	B100,B47,B66,C35
lof_cds	Chr5	47297788	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	40	A16,A25,B100,B104,B105,B108,B111,B127,B129,B19,B23,B28,B3,B33,B4,B44,B47,B48,B50,B56,B63,B79,B81,B83,B84,B89,B90,B96,B99,C22,C25,C35,C45,C56,C64,C7,C72,C73,C85,D6
lof_cds	Chr5	47297792	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	42	A16,A25,B10,B100,B104,B105,B111,B127,B129,B19,B23,B28,B3,B33,B4,B44,B47,B48,B50,B56,B63,B79,B81,B83,B84,B89,B90,B96,B99,C21,C22,C25,C35,C37,C45,C56,C64,C7,C72,C73,C85,D6
typical_cds_rare	Chr5	47297846	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	C70
typical_cds_rare	Chr5	47297940	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B140,B90,C87
typical_cds_rare	Chr5	47297941	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B24
typical_cds_rare	Chr5	47297952	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	C1,C43
lof_cds	Chr5	47297964	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B140
typical_cds_rare	Chr5	47297964	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B140
typical_cds_rare	Chr5	47297984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	C1,C43,D4
typical_cds_rare	Chr5	47297995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	B41,B53
typical_cds_rare	Chr5	47298133	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	A11,A3
lof_cds	Chr5	47298137	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	C1,C43
typical_cds_rare	Chr5	47298137	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	C1,C43
typical_cds_rare	Chr5	47298180	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	B48,B98,C61,C80
typical_cds_rare	Chr5	47298212	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	C24,C3
typical_cds_rare	Chr5	47298236	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B135,B74,B77
typical_cds_rare	Chr5	47298245	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	5	B110,B3,B46,C12,C82
typical_cds_rare	Chr5	47298246	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	3	B43,B76,D1
lof_cds	Chr5	47298250	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B119
typical_cds_rare	Chr5	47298250	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B119
lof_cds	Chr5	47298259	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	B28,B37,B93,C38
typical_cds_rare	Chr5	47298259	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	B28,B37,B93,C38
typical_cds_rare	Chr5	47298289	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	4	B66,C35,C66,D2
typical_cds_rare	Chr5	47298307	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	C4
typical_cds_rare	Chr5	47298311	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	B104
typical_cds_rare	Chr5	47298333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	2	B17,C77
lof_cds	Chr5	47298350	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	C61
typical_cds_rare	Chr5	47298350	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131026029	SmilChr05G003542	131026029	rna-XM_057955807.1	1	C61