source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	48160862	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	D10
typical_cds_rare	Chr5	48160888	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	D10
typical_cds_rare	Chr5	48160914	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	2	B37,C38
typical_cds_rare	Chr5	48160930	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	5	A20,A3,B54,B87,D9
typical_cds_rare	Chr5	48161034	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	5	B104,B137,C32,C35,C68
typical_cds_rare	Chr5	48161080	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B27
typical_cds_rare	Chr5	48161095	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	D7
typical_cds_rare	Chr5	48161105	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	5	B48,B66,B98,C61,D11
typical_cds_rare	Chr5	48161130	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B33
typical_cds_rare	Chr5	48164615	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B100
typical_cds_rare	Chr5	48164696	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	2	B90,B92
lof_cds	Chr5	48164728	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B2
typical_cds_rare	Chr5	48164728	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B2
typical_cds_rare	Chr5	48164907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	4	B138,C64,C66,D2
lof_cds	Chr5	48164945	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	16	A10,B100,B101,B102,B34,B36,B56,B71,C27,C43,C52,C53,C77,D1,D11,D3
typical_cds_rare	Chr5	48164964	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	4	B138,B60,B79,C38
typical_cds_rare	Chr5	48164988	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	4	B12,B42,B43,D4
lof_cds	Chr5	48165037	TTA	T	INDEL	2bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	18	B100,B101,B104,B115,B123,B36,B61,B71,B76,C27,C42,C46,C48,C52,C77,C80,D1,D3
typical_cds_rare	Chr5	48165094	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	3	B1,B2,B37
lof_cds	Chr5	48165108	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	17	A16,B103,B132,B27,B31,B4,B52,B6,B62,B83,B84,B95,C37,C38,C4,C40,C46
lof_cds	Chr5	48165111	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	21	A16,B103,B132,B27,B31,B4,B52,B6,B62,B66,B8,B83,B84,B95,C24,C37,C38,C4,C40,C45,C46
lof_cds	Chr5	48165134	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	57	A1,A16,A20,A24,B102,B103,B105,B118,B120,B126,B13,B130,B132,B22,B27,B31,B32,B39,B46,B5,B52,B6,B61,B62,B66,B7,B74,B77,B8,B83,B84,B95,C11,C17,C19,C24,C26,C27,C37,C38,C39,C4,C40,C45,C46,C5,C54,C56,C61,C70,C72,C74,C78,C81,C83,C85,D6
lof_cds	Chr5	48165145	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	25	A1,A20,B115,B126,B13,B19,B2,B22,B39,B46,B5,B74,B93,C11,C18,C26,C31,C39,C5,C54,C70,C74,C78,C81,D6
lof_cds	Chr5	48165158	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	19	A1,A20,B126,B13,B19,B2,B22,B26,B39,B46,B5,C18,C26,C31,C39,C42,C54,C78,C81
lof_cds	Chr5	48165167	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	29	A1,A20,B115,B126,B13,B19,B2,B26,B39,B45,B46,B5,B56,B73,B74,B76,B89,B93,C11,C31,C39,C42,C5,C54,C69,C70,C74,C78,C81
lof_cds	Chr5	48165171	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	30	A1,A20,B115,B126,B13,B19,B2,B22,B26,B39,B45,B46,B5,B56,B73,B74,B76,B89,B93,C11,C18,C31,C39,C5,C54,C69,C70,C74,C78,C81
lof_cds	Chr5	48165178	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	31	A1,A20,B115,B126,B13,B19,B2,B22,B26,B39,B45,B46,B5,B56,B73,B74,B76,B89,B93,C11,C18,C31,C39,C42,C5,C54,C69,C70,C74,C78,C81
lof_cds	Chr5	48165219	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	69	A1,A10,A13,A15,A2,A20,A22,B102,B106,B11,B110,B112,B113,B115,B125,B126,B127,B13,B133,B137,B16,B19,B21,B22,B26,B30,B35,B36,B39,B44,B45,B5,B55,B56,B58,B70,B73,B74,B77,B78,B88,B89,B93,C1,C10,C11,C15,C18,C22,C25,C26,C32,C36,C42,C47,C5,C55,C59,C6,C63,C68,C69,C70,C73,C74,C78,C81,C84,D6
lof_cds	Chr5	48165221	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	70	A1,A10,A13,A15,A2,A20,A22,B102,B106,B11,B110,B112,B113,B115,B125,B126,B127,B13,B133,B137,B16,B19,B21,B22,B26,B30,B35,B36,B39,B44,B45,B5,B55,B56,B58,B70,B72,B73,B74,B77,B78,B88,B89,B93,C1,C10,C11,C15,C18,C22,C25,C26,C32,C36,C42,C47,C5,C55,C59,C6,C63,C68,C69,C70,C73,C74,C78,C81,C84,D6
lof_cds	Chr5	48165224	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	70	A1,A10,A13,A15,A2,A20,A22,B102,B106,B11,B110,B112,B113,B115,B125,B126,B127,B13,B133,B137,B16,B19,B21,B22,B26,B30,B35,B36,B39,B42,B44,B45,B5,B55,B56,B58,B70,B73,B74,B77,B78,B88,B89,B93,C1,C10,C11,C15,C18,C22,C25,C26,C32,C36,C42,C47,C5,C55,C59,C6,C63,C68,C69,C70,C73,C74,C78,C81,C84,D6
lof_cds	Chr5	48165231	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	69	A1,A10,A13,A15,A2,A20,A22,B102,B106,B11,B110,B112,B113,B115,B125,B127,B13,B133,B137,B16,B19,B21,B22,B26,B30,B35,B36,B39,B42,B44,B45,B5,B55,B56,B58,B70,B72,B73,B74,B77,B78,B88,B89,B93,C1,C10,C11,C15,C18,C22,C25,C26,C32,C36,C42,C47,C5,C55,C59,C6,C63,C68,C69,C70,C73,C74,C78,C81,C84
lof_cds	Chr5	48165242	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	77	A1,A10,A13,A15,A2,A20,A22,B10,B100,B102,B109,B11,B110,B112,B113,B115,B123,B125,B127,B13,B133,B137,B16,B19,B2,B21,B22,B23,B26,B30,B35,B36,B39,B44,B45,B46,B5,B55,B56,B58,B70,B72,B74,B76,B77,B78,B88,B89,B93,C1,C10,C11,C15,C18,C2,C22,C25,C26,C32,C33,C36,C42,C47,C5,C54,C55,C6,C63,C65,C68,C70,C73,C74,C78,C81,C84,D5
lof_cds	Chr5	48165246	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	80	A1,A10,A13,A15,A2,A20,A22,B10,B100,B102,B109,B11,B110,B112,B113,B115,B12,B123,B125,B127,B13,B133,B137,B16,B19,B2,B21,B22,B23,B26,B30,B35,B36,B39,B44,B45,B46,B5,B55,B56,B58,B70,B72,B74,B76,B77,B78,B88,B89,B93,C1,C10,C11,C15,C18,C2,C22,C25,C26,C31,C32,C33,C36,C42,C43,C47,C5,C54,C55,C6,C63,C65,C68,C70,C73,C74,C78,C81,C84,D5
typical_cds_rare	Chr5	48165267	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B48
typical_cds_rare	Chr5	48165273	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B48
typical_cds_rare	Chr5	48165276	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B48
typical_cds_rare	Chr5	48165285	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	C75
typical_cds_rare	Chr5	48165299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	5	A13,B128,B15,B48,B49
typical_cds_rare	Chr5	48165315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B99
typical_cds_rare	Chr5	48165321	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	5	C12,C24,C3,C8,D6
lof_cds	Chr5	48165408	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	123	A10,A18,A19,A20,A23,A3,A4,A5,A7,A8,B100,B101,B104,B106,B107,B109,B11,B112,B113,B114,B119,B120,B122,B123,B128,B130,B131,B132,B133,B134,B135,B137,B139,B140,B16,B17,B18,B2,B20,B23,B26,B27,B28,B29,B30,B33,B36,B37,B38,B4,B41,B43,B47,B5,B52,B54,B56,B58,B61,B63,B64,B65,B66,B68,B69,B7,B74,B75,B77,B78,B85,B91,B92,B95,B96,B97,B98,B99,C10,C11,C13,C14,C16,C18,C22,C3,C34,C35,C39,C4,C41,C43,C46,C47,C49,C50,C51,C52,C53,C54,C56,C60,C61,C62,C66,C67,C68,C70,C74,C75,C78,C79,C80,C81,C82,C86,C87,C9,D1,D2,D5,D7,D8
lof_cds	Chr5	48165409	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	123	A10,A18,A19,A20,A23,A3,A4,A5,A7,A8,B100,B101,B104,B106,B107,B109,B11,B112,B113,B114,B119,B120,B122,B123,B128,B130,B131,B132,B133,B134,B135,B137,B139,B140,B16,B17,B18,B2,B20,B23,B26,B27,B28,B29,B30,B33,B36,B37,B38,B4,B41,B43,B47,B5,B52,B54,B56,B58,B61,B63,B64,B65,B66,B68,B69,B7,B74,B75,B77,B78,B85,B91,B92,B95,B96,B97,B98,B99,C10,C11,C13,C14,C16,C18,C22,C3,C34,C35,C39,C4,C41,C43,C46,C47,C49,C50,C51,C52,C53,C54,C56,C60,C61,C62,C66,C67,C68,C70,C74,C75,C78,C79,C80,C81,C82,C86,C87,C9,D1,D2,D5,D7,D8
lof_cds	Chr5	48165412	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	7	A19,A23,B130,B85,B86,B93,D4
lof_cds	Chr5	48165418	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	7	A19,A23,B130,B85,B86,B93,D4
lof_cds	Chr5	48165420	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	79	A1,A11,A13,A16,B1,B102,B104,B107,B109,B11,B114,B119,B120,B123,B127,B128,B129,B130,B132,B136,B138,B139,B14,B15,B22,B27,B31,B37,B39,B40,B41,B42,B48,B5,B51,B53,B56,B57,B59,B6,B62,B63,B73,B8,B80,B83,B84,B9,B97,B99,C27,C28,C31,C32,C33,C35,C4,C40,C43,C44,C47,C5,C51,C55,C56,C6,C63,C65,C69,C7,C70,C75,C8,C83,C86,C9,D10,D5,D9
lof_cds	Chr5	48165426	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	79	A1,A11,A13,A16,B1,B102,B104,B107,B109,B11,B114,B119,B120,B123,B127,B128,B129,B130,B132,B136,B138,B139,B14,B15,B22,B27,B31,B37,B39,B40,B41,B42,B48,B5,B51,B53,B56,B57,B59,B6,B62,B63,B73,B8,B80,B83,B84,B9,B97,B99,C27,C28,C31,C32,C33,C35,C4,C40,C43,C44,C47,C5,C51,C55,C56,C6,C63,C65,C69,C7,C70,C75,C8,C83,C86,C9,D10,D5,D9
lof_cds	Chr5	48165434	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	72	A10,A18,A19,A20,A23,A4,A5,A7,A8,B101,B104,B106,B112,B120,B122,B123,B131,B132,B134,B135,B137,B16,B17,B20,B26,B27,B28,B30,B33,B38,B41,B47,B5,B56,B58,B64,B65,B66,B7,B75,B77,B78,B92,B95,B96,B97,B98,B99,C10,C13,C14,C16,C22,C35,C39,C4,C43,C46,C47,C50,C52,C54,C67,C68,C75,C78,C80,C87,C9,D1,D5,D8
lof_cds	Chr5	48165437	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	62	A10,A19,A4,A5,A7,B101,B106,B112,B122,B123,B131,B132,B134,B135,B137,B16,B17,B20,B26,B27,B28,B30,B33,B38,B41,B47,B5,B56,B58,B64,B65,B66,B7,B75,B78,B92,B95,B96,B97,B98,B99,C10,C13,C14,C16,C35,C39,C4,C46,C47,C50,C52,C54,C67,C68,C75,C80,C87,C9,D1,D5,D8
lof_cds	Chr5	48165515	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	32	A10,A18,B101,B120,B27,B28,B30,B35,B37,B5,B64,B66,B7,B78,B85,B92,B95,B96,B98,C10,C16,C36,C46,C49,C54,C58,C66,C68,C74,C78,C80,C82
lof_cds	Chr5	48165519	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	29	A10,A18,B120,B27,B28,B30,B35,B37,B64,B66,B7,B78,B85,B92,B95,B96,B98,C10,C16,C36,C46,C49,C54,C58,C66,C74,C78,C80,C82
lof_cds	Chr5	48165548	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	3	B128,B138,C69
typical_cds_rare	Chr5	48165548	C	CG	INDEL	1bp_insertion	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	3	B128,B138,C69
typical_cds_rare	Chr5	48165560	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	3	B128,B138,C69
typical_cds_rare	Chr5	48165566	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	3	B128,B138,C69
lof_cds	Chr5	48165587	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	C10
typical_cds_rare	Chr5	48165587	GC	G	INDEL	1bp_deletion	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	C10
lof_cds	Chr5	48165633	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	C21
typical_cds_rare	Chr5	48165633	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	C21
typical_cds_rare	Chr5	48165686	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	C2
lof_cds	Chr5	48165726	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B14
typical_cds_rare	Chr5	48165726	GT	G	INDEL	1bp_deletion	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B14
typical_cds_rare	Chr5	48165728	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987101	SmilChr05G003609	130987101	rna-XM_057910719.1	1	B14