source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	48877705	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	B14,B26,C37,C62
typical_cds_rare	Chr5	48877727	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	B47,C56,C65
typical_cds_rare	Chr5	48877749	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	C4
typical_cds_rare	Chr5	48877754	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	B74,B77,C32,C68
lof_cds	Chr5	48877769	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	A11,B66
typical_cds_rare	Chr5	48877769	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	A11,B66
typical_cds_rare	Chr5	48877778	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	B42,B43,D6
lof_cds	Chr5	48877782	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	22	A1,A16,A25,B104,B130,B138,B24,B4,B41,B47,B54,B72,B75,B97,C28,C33,C38,C5,C55,C69,C74,C83
lof_cds	Chr5	48877787	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B66
typical_cds_rare	Chr5	48877787	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B66
typical_cds_rare	Chr5	48877788	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	A25,B4,C69
typical_cds_rare	Chr5	48877789	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B66
typical_cds_rare	Chr5	48877796	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	C5
lof_cds	Chr5	48877916	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	22	B105,B114,B131,B134,B139,B34,B37,B56,B58,B90,B92,B96,C18,C22,C3,C32,C39,C53,C55,C56,C57,C87
lof_cds	Chr5	48877943	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	7	B109,B41,B90,B92,C13,C35,C40
typical_cds_rare	Chr5	48879545	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	B130,B136
typical_cds_rare	Chr5	48879607	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	B126,B72,B80,B94
lof_cds	Chr5	48879649	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B119
typical_cds_rare	Chr5	48879649	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B119
lof_cds	Chr5	48879666	T	TA	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	25	A21,B1,B100,B117,B122,B131,B139,B140,B28,B29,B31,B33,B39,B87,B89,B91,B98,B99,C1,C21,C39,C46,C72,C79,D6
typical_cds_rare	Chr5	48879667	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	C13,C51,C6,C77
lof_cds	Chr5	48879710	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	B126,B72,B80,B94,C34
typical_cds_rare	Chr5	48879710	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	B126,B72,B80,B94,C34
lof_cds	Chr5	48879716	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	B126,B72,B80,B94,C34
typical_cds_rare	Chr5	48879716	G	GGA	INDEL	2bp_insertion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	B126,B72,B80,B94,C34
lof_cds	Chr5	48879719	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	B126,B72,B80,B94,C34
typical_cds_rare	Chr5	48879719	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	B126,B72,B80,B94,C34
lof_cds	Chr5	48879732	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	62	A1,A11,A2,A24,A3,A5,B10,B110,B113,B126,B127,B130,B131,B138,B15,B35,B38,B39,B44,B46,B47,B48,B51,B53,B58,B65,B66,B74,B77,B79,B81,B88,B90,B91,B92,B94,B98,C11,C16,C19,C24,C28,C32,C41,C42,C44,C45,C47,C51,C55,C56,C61,C62,C65,C68,C69,C7,C76,C79,C8,C80,C82
typical_cds_rare	Chr5	48879752	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	B34,C1,C7,D6
lof_cds	Chr5	48879753	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	45	A18,A23,B108,B110,B111,B117,B122,B124,B128,B137,B18,B19,B27,B40,B46,B53,B57,B61,B62,B64,B68,B7,B71,B78,B80,C11,C23,C25,C33,C40,C41,C43,C49,C6,C60,C62,C64,C66,C67,C69,C71,C74,C82,C9,D3
typical_cds_rare	Chr5	48879763	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	B118,B55,C25
typical_cds_rare	Chr5	48879790	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	A9,B12,B54,C2
typical_cds_rare	Chr5	48879825	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	A9,B12,B54,C2
typical_cds_rare	Chr5	48879828	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	C64,D2
typical_cds_rare	Chr5	48879962	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	B104,B40
typical_cds_rare	Chr5	48879987	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	B139,B33
typical_cds_rare	Chr5	48880052	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	C80
typical_cds_rare	Chr5	48880072	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	C24
typical_cds_rare	Chr5	48880130	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	A1,B72
typical_cds_rare	Chr5	48880151	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	A9,B19
lof_cds	Chr5	48880170	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	19	A21,A4,A7,B121,B137,B17,B2,B38,B41,B49,B54,B71,B78,C1,C11,C15,C27,C45,C79
typical_cds_rare	Chr5	48880185	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	C37,C48,D10,D7
typical_cds_rare	Chr5	48880212	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	B135,B2,C64,C66
lof_cds	Chr5	48880227	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	23	A20,B1,B105,B11,B118,B129,B36,B41,B44,C16,C19,C2,C26,C30,C33,C42,C68,C71,C9,D2,D3,D8,D9
typical_cds_rare	Chr5	48880248	GA	*	INDEL	1bp_deletion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	A4,B2,C1,C27,D11
typical_cds_rare	Chr5	48880443	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	B101,B132,B68,D11
typical_cds_rare	Chr5	48880479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	A18
typical_cds_rare	Chr5	48880490	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	A7,B46
lof_cds	Chr5	48880554	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	A7,B118,B30,B35,B55
typical_cds_rare	Chr5	48880554	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	A7,B118,B30,B35,B55
lof_cds	Chr5	48880559	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	30	A16,A23,B11,B113,B114,B115,B23,B31,B44,B47,B60,B64,B65,B70,B71,B73,B78,B80,C11,C21,C3,C32,C47,C48,C52,C64,C65,C68,C69,D9
typical_cds_rare	Chr5	48880571	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	B118,B55,B7
lof_cds	Chr5	48880681	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	7	A16,A7,B11,B71,B73,B80,C11
lof_cds	Chr5	48880695	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	13	A7,B105,B123,B127,B22,B45,B79,B8,C13,C39,C49,C83,D6
typical_cds_rare	Chr5	48880700	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B104
typical_cds_rare	Chr5	48880719	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	B24,B71,D9
lof_cds	Chr5	48880727	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	32	A11,A16,A6,A9,B105,B107,B115,B118,B121,B19,B21,B23,B30,B38,B39,B40,B45,B54,B62,B73,B84,B89,B97,C26,C34,C36,C54,C57,C77,C84,C87,D8
typical_cds_rare	Chr5	48880762	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B48
typical_cds_rare	Chr5	48880793	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B53
lof_cds	Chr5	48880810	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	9	B114,B65,B70,B78,B80,C47,C64,C65,D9
lof_cds	Chr5	48880819	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	B80,C47,C64,C65,D9
typical_cds_rare	Chr5	48880819	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	B80,C47,C64,C65,D9
typical_cds_rare	Chr5	48880855	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	B80,C47,C65,D9
lof_cds	Chr5	48880877	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	A14,A19,B73,C63,D6
typical_cds_rare	Chr5	48880877	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	A14,A19,B73,C63,D6
typical_cds_rare	Chr5	48880879	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	B80,C47
typical_cds_rare	Chr5	48880891	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	A3,B94
typical_cds_rare	Chr5	48880909	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	A14,A19,B134,C52,D6
lof_cds	Chr5	48881023	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	7	B105,B11,B134,B138,B23,B60,B73
typical_cds_rare	Chr5	48881046	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	B119,C80
typical_cds_rare	Chr5	48881048	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	A22,B100,B133
typical_cds_rare	Chr5	48881067	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	A2,B10,B58,C76
typical_cds_rare	Chr5	48881080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B128
typical_cds_rare	Chr5	48881233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B21
typical_cds_rare	Chr5	48881243	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	A14,B133,B81,C27
lof_cds	Chr5	48881334	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	A15,B58,B8,C13,C30
typical_cds_rare	Chr5	48881334	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	A15,B58,B8,C13,C30
typical_cds_rare	Chr5	48881343	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	C35
typical_cds_rare	Chr5	48881379	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	A11,C51,C59
typical_cds_rare	Chr5	48881429	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	A11,C42,C51
typical_cds_rare	Chr5	48881496	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	B47,C65
lof_cds	Chr5	48881577	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	B89,B91
typical_cds_rare	Chr5	48881577	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	B89,B91
typical_cds_rare	Chr5	48881580	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	4	B113,B132,C50,C65
typical_cds_rare	Chr5	48881610	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	A8,C41,D10
typical_cds_rare	Chr5	48881660	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	1	B67
typical_cds_rare	Chr5	48881661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	5	B36,C24,C33,C42,D10
lof_cds	Chr5	48881666	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	8	A22,A8,B111,B130,B134,B60,B83,C31
typical_cds_rare	Chr5	48881708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	2	C87,D10
typical_cds_rare	Chr5	48881729	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026064	SmilChr05G003645	131026064	rna-XM_057955841.1	3	B1,B33,C82