source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	52677073	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	D7
typical_cds_rare	Chr5	52677086	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	A7,B117,B133
typical_cds_rare	Chr5	52677348	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B117,B46
typical_cds_rare	Chr5	52677359	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B101,B90,C18
typical_cds_rare	Chr5	52677411	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	C56,C65
lof_cds	Chr5	52677422	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B123,C15
typical_cds_rare	Chr5	52677422	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B123,C15
lof_cds	Chr5	52677439	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	37	A1,A18,A23,A24,A4,B100,B105,B109,B119,B133,B17,B30,B34,B4,B40,B45,B47,B52,B55,B58,B6,B64,B66,B73,B80,B93,C29,C31,C33,C36,C46,C52,C6,C78,C8,D1,D3
lof_cds	Chr5	52677451	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	181	A1,A11,A14,A16,A18,A20,A22,A23,A24,A25,A3,A4,A7,A8,B1,B10,B100,B102,B104,B105,B106,B109,B110,B112,B113,B115,B119,B12,B121,B123,B124,B125,B127,B128,B129,B13,B130,B132,B133,B134,B135,B136,B139,B140,B15,B16,B17,B18,B2,B20,B23,B24,B25,B26,B27,B28,B29,B3,B30,B33,B34,B35,B38,B39,B4,B40,B41,B42,B43,B45,B47,B5,B50,B52,B53,B55,B56,B57,B58,B59,B6,B61,B62,B64,B65,B66,B67,B69,B7,B70,B71,B72,B73,B75,B76,B77,B78,B8,B80,B84,B85,B86,B87,B88,B91,B92,B93,B94,B95,B96,B98,B99,C10,C11,C12,C13,C14,C15,C16,C19,C22,C24,C25,C27,C29,C3,C30,C31,C32,C33,C36,C37,C4,C43,C46,C48,C49,C5,C51,C52,C54,C55,C56,C57,C58,C59,C6,C60,C62,C64,C66,C67,C68,C69,C7,C70,C71,C72,C74,C76,C77,C78,C79,C8,C81,C82,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D6,D7,D8,D9
lof_cds	Chr5	52681978	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	B107,C2,C58,C62
typical_cds_rare	Chr5	52681978	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	B107,C2,C58,C62
lof_cds	Chr5	52681979	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	B107,C2,C58,C62
typical_cds_rare	Chr5	52681979	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	B107,C2,C58,C62
lof_cds	Chr5	52682020	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	10	A24,B124,B125,B42,B43,B7,B99,C78,C87,C9
typical_cds_rare	Chr5	52682021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B121,B13,C39
lof_cds	Chr5	52682047	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	23	A10,A22,A5,B12,B121,B13,B135,B137,B3,B38,B52,B65,B7,C18,C3,C39,C41,C54,C64,C66,C7,C80,D5
lof_cds	Chr5	52682050	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	13	A5,B121,B13,B3,B38,B52,C18,C39,C54,C64,C7,C80,D5
typical_cds_rare	Chr5	52682077	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	C62
typical_cds_rare	Chr5	52682082	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	C21
typical_cds_rare	Chr5	52682097	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	A10,A22,B137,C41
lof_cds	Chr5	52682100	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B117,B25,B39
typical_cds_rare	Chr5	52682100	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B117,B25,B39
lof_cds	Chr5	52682113	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	67	A25,A3,A5,A9,B101,B107,B108,B111,B121,B132,B137,B138,B140,B15,B18,B19,B21,B23,B26,B29,B30,B36,B4,B5,B50,B52,B60,B61,B69,B71,B72,B74,B78,B8,B85,B95,B97,C14,C17,C18,C2,C26,C29,C35,C36,C39,C40,C43,C46,C47,C48,C50,C53,C54,C61,C63,C67,C69,C71,C72,C73,C74,C76,C77,C81,D3,D7
lof_cds	Chr5	52682116	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	67	A25,A3,A5,A9,B101,B107,B108,B111,B121,B132,B137,B138,B140,B15,B18,B19,B21,B23,B26,B29,B30,B36,B4,B5,B50,B52,B60,B61,B69,B71,B72,B74,B78,B8,B85,B95,B97,C14,C17,C18,C2,C26,C29,C35,C36,C39,C40,C43,C46,C47,C48,C50,C53,C54,C61,C63,C67,C69,C71,C72,C73,C74,C76,C77,C81,D3,D7
lof_cds	Chr5	52682129	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B39,B44,C4
typical_cds_rare	Chr5	52682129	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B39,B44,C4
lof_cds	Chr5	52682146	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	86	A1,A11,A16,A20,A23,A24,A7,A8,B101,B104,B11,B110,B111,B112,B113,B114,B124,B125,B129,B130,B132,B134,B136,B139,B140,B2,B24,B28,B31,B33,B35,B4,B41,B42,B43,B44,B48,B54,B56,B57,B59,B66,B67,B69,B70,B73,B75,B77,B85,B87,B89,B96,B99,C1,C10,C16,C2,C21,C23,C24,C3,C32,C33,C42,C44,C54,C55,C57,C58,C62,C63,C68,C7,C71,C75,C78,C79,C82,C84,C85,C86,C87,C9,D1,D11,D9
typical_cds_rare	Chr5	52682188	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B101,B140
lof_cds	Chr5	52682197	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B58
typical_cds_rare	Chr5	52682197	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B58
lof_cds	Chr5	52682211	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	6	B107,B62,B98,C48,C87,D1
lof_cds	Chr5	52682217	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	5	B107,B62,B98,C48,C87
typical_cds_rare	Chr5	52682217	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	5	B107,B62,B98,C48,C87
lof_cds	Chr5	52682236	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	5	A1,A2,B56,C22,C37
typical_cds_rare	Chr5	52682236	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	5	A1,A2,B56,C22,C37
lof_cds	Chr5	52682243	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B68,C87
typical_cds_rare	Chr5	52682243	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B68,C87
lof_cds	Chr5	52682263	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	9	A20,A5,B120,B124,B17,B56,B58,C56,C57
lof_cds	Chr5	52682266	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	10	A20,A5,B120,B124,B17,B56,B58,B63,C56,C57
lof_cds	Chr5	52682438	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B1,B2
typical_cds_rare	Chr5	52682438	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B1,B2
typical_cds_rare	Chr5	52682472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	C82
typical_cds_rare	Chr5	52682542	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B104,B133
typical_cds_rare	Chr5	52682543	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B133
typical_cds_rare	Chr5	52682550	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B104,B133
typical_cds_rare	Chr5	52682572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B104,C16
typical_cds_rare	Chr5	52682574	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B104,C16
lof_cds	Chr5	52682580	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B104
typical_cds_rare	Chr5	52682580	C	CGA	INDEL	2bp_insertion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B104
lof_cds	Chr5	52682582	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B104
typical_cds_rare	Chr5	52682582	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B104
typical_cds_rare	Chr5	52682603	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B104,C16
typical_cds_rare	Chr5	52682618	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B104,C16
typical_cds_rare	Chr5	52682621	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	C16
typical_cds_rare	Chr5	52682627	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	C16
lof_cds	Chr5	52682655	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	A8,B35
typical_cds_rare	Chr5	52682655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	A8,B35
typical_cds_rare	Chr5	52682670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B69,C45
typical_cds_rare	Chr5	52682674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B69,C45
typical_cds_rare	Chr5	52682686	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B8,C16,C67
typical_cds_rare	Chr5	52682704	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B102,B123,B13
typical_cds_rare	Chr5	52682723	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	B6,C12,C41,C67
typical_cds_rare	Chr5	52682732	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	5	B12,B133,B20,B64,B84
typical_cds_rare	Chr5	52682753	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	C83
typical_cds_rare	Chr5	52682902	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B126,B2,C26
typical_cds_rare	Chr5	52682903	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	B110,B124,B125,B58
lof_cds	Chr5	52682906	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B12
typical_cds_rare	Chr5	52682906	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B12
lof_cds	Chr5	52682909	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B12
typical_cds_rare	Chr5	52682909	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B12
typical_cds_rare	Chr5	52682915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B12
typical_cds_rare	Chr5	52682920	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	A24,B12,B126,D11
lof_cds	Chr5	52682937	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	B77,C26,C45,C50
typical_cds_rare	Chr5	52682937	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	B77,C26,C45,C50
lof_cds	Chr5	52682938	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	64	A1,A20,A23,A24,A4,A7,A8,B1,B104,B110,B112,B113,B124,B125,B130,B133,B134,B136,B138,B139,B140,B2,B24,B28,B31,B32,B33,B35,B4,B41,B42,B53,B54,B56,B57,B66,B67,B7,B70,B75,B77,B92,B93,B96,B99,C24,C26,C29,C32,C33,C45,C50,C54,C55,C68,C7,C75,C78,C82,C85,C86,C87,C9,D10
typical_cds_rare	Chr5	52682946	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B12
lof_cds	Chr5	52682962	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	8	A24,B101,B126,B129,B19,B95,C59,C82
typical_cds_rare	Chr5	52682972	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	D10
typical_cds_rare	Chr5	52683013	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B131,B15,C57
typical_cds_rare	Chr5	52683026	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	B105
typical_cds_rare	Chr5	52683042	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	3	B77,B89,C50
typical_cds_rare	Chr5	52683059	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	D9
typical_cds_rare	Chr5	52683067	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	2	B104,B33
typical_cds_rare	Chr5	52683085	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	4	B56,B96,C78,C8
typical_cds_rare	Chr5	52683086	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	1	C80
lof_cds	Chr5	52683151	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131026105	SmilChr05G003894	131026105	rna-XM_057955877.1	99	A21,A22,A3,A7,A8,B10,B100,B102,B105,B106,B115,B118,B127,B13,B133,B135,B15,B16,B17,B2,B20,B23,B25,B26,B28,B36,B38,B39,B4,B42,B43,B50,B55,B56,B57,B59,B62,B69,B7,B70,B78,B8,B84,B85,B87,B88,B9,B90,B91,B92,B94,B95,B96,C10,C11,C12,C13,C14,C15,C18,C20,C23,C24,C25,C3,C31,C32,C33,C4,C40,C46,C48,C49,C5,C51,C52,C56,C57,C59,C64,C66,C68,C69,C70,C72,C76,C77,C79,C81,C82,C84,C85,C86,C87,D1,D2,D4,D5,D6