source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr5	53249534	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B137
typical_cds_rare	Chr5	53249534	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B137
typical_cds_rare	Chr5	53249565	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	3	B18,C18,C34
typical_cds_rare	Chr5	53249599	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	C13
typical_cds_rare	Chr5	53249613	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	C13
typical_cds_rare	Chr5	53249614	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	2	B49,C27
lof_cds	Chr5	53249615	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	17	B123,B135,B16,B21,B36,B49,B56,B58,B67,C18,C38,C43,C46,C80,C81,C87,D1
typical_cds_rare	Chr5	53249629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	2	B23,B35
lof_cds	Chr5	53249633	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	24	A14,A16,A3,B106,B121,B133,B35,B59,B6,B65,B71,B85,C14,C17,C25,C27,C38,C50,C59,C65,C73,C81,C86,D6
typical_cds_rare	Chr5	53249682	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	A25
typical_cds_rare	Chr5	53249694	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	5	B59,B72,B90,B92,C21
typical_cds_rare	Chr5	53249700	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B32
typical_cds_rare	Chr5	53249723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B104
lof_cds	Chr5	53249763	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	5	B37,C27,C28,C38,C44
typical_cds_rare	Chr5	53249763	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	5	B37,C27,C28,C38,C44
typical_cds_rare	Chr5	53249767	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	5	A21,B101,B138,B8,C27
typical_cds_rare	Chr5	53249768	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	4	A21,C32,C39,C68
lof_cds	Chr5	53249778	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	14	B35,B4,B47,B55,B83,C11,C13,C20,C35,C36,C59,C69,C81,D11
typical_cds_rare	Chr5	53249799	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	5	B104,B18,B19,B44,C18
typical_cds_rare	Chr5	53249801	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B78
lof_cds	Chr5	53249812	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	136	A1,A10,A13,A14,A16,A19,A21,A22,A25,B1,B100,B102,B103,B105,B106,B108,B109,B11,B111,B113,B117,B119,B121,B123,B125,B126,B127,B128,B132,B137,B138,B140,B18,B19,B2,B20,B27,B28,B30,B31,B33,B36,B37,B4,B40,B42,B43,B44,B47,B48,B49,B5,B54,B55,B57,B59,B6,B61,B62,B64,B67,B70,B72,B75,B77,B78,B81,B83,B84,B85,B86,B87,B89,B9,B90,B91,B92,B93,B94,B96,B97,B98,C10,C12,C13,C16,C2,C21,C22,C24,C26,C29,C3,C30,C31,C34,C35,C36,C39,C4,C40,C43,C44,C46,C47,C49,C5,C52,C54,C56,C57,C58,C61,C62,C64,C65,C66,C68,C7,C71,C72,C74,C77,C78,C79,C82,C84,C85,C86,D1,D2,D3,D4,D5,D6,D8
lof_cds	Chr5	53249820	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	27	A19,A25,B109,B111,B137,B140,B19,B30,B33,B44,B49,B57,B62,B87,B90,B92,C13,C16,C29,C36,C39,C40,C46,C49,C52,C68,C82
lof_cds	Chr5	53249824	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	159	A1,A11,A13,A15,A18,A19,A2,A20,A22,A23,A24,A4,A5,A6,A7,A8,A9,B10,B101,B103,B105,B107,B108,B109,B11,B110,B111,B112,B114,B115,B117,B118,B119,B12,B120,B123,B124,B126,B127,B129,B131,B132,B134,B135,B137,B138,B139,B140,B15,B16,B20,B21,B22,B24,B25,B28,B29,B31,B32,B35,B37,B38,B4,B40,B41,B42,B43,B44,B45,B47,B49,B5,B52,B55,B56,B58,B60,B61,B62,B63,B65,B69,B7,B70,B73,B74,B76,B79,B80,B83,B88,B9,B93,B95,B96,B98,C1,C10,C11,C13,C14,C16,C17,C18,C19,C2,C20,C22,C23,C24,C3,C34,C35,C36,C38,C39,C4,C40,C41,C42,C43,C44,C45,C47,C48,C49,C50,C52,C53,C55,C57,C58,C59,C6,C60,C61,C63,C65,C67,C69,C72,C73,C76,C77,C78,C79,C8,C80,C81,C83,C84,C86,C87,C9,D10,D11,D2,D6,D7
lof_cds	Chr5	53249830	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	155	A1,A11,A13,A15,A18,A19,A2,A20,A22,A23,A24,A4,A5,A6,A7,A8,B10,B101,B103,B105,B107,B108,B109,B11,B110,B111,B112,B114,B115,B117,B118,B119,B12,B120,B123,B124,B126,B127,B129,B131,B132,B134,B135,B137,B138,B139,B140,B15,B16,B20,B21,B22,B24,B25,B28,B29,B31,B32,B35,B37,B38,B4,B40,B41,B42,B43,B44,B45,B47,B49,B5,B52,B55,B56,B58,B60,B61,B62,B63,B69,B7,B70,B73,B74,B76,B79,B80,B83,B88,B9,B93,B95,B96,B98,C1,C10,C11,C13,C14,C16,C17,C18,C19,C2,C20,C22,C23,C24,C3,C34,C35,C36,C39,C4,C40,C41,C42,C43,C44,C45,C47,C48,C49,C52,C53,C55,C57,C58,C59,C6,C60,C61,C63,C65,C67,C69,C72,C73,C76,C77,C78,C79,C8,C80,C81,C83,C84,C86,C87,C9,D10,D11,D2,D6,D7
typical_cds_rare	Chr5	53249838	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B73
typical_cds_rare	Chr5	53249843	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	C84
typical_cds_rare	Chr5	53249865	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	3	B35,B69,C2
typical_cds_rare	Chr5	53249866	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B128
lof_cds	Chr5	53249885	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	4	B41,B71,B89,C70
typical_cds_rare	Chr5	53249885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	4	B41,B71,B89,C70
typical_cds_rare	Chr5	53249897	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	C51
typical_cds_rare	Chr5	53249908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	D6
lof_cds	Chr5	53249937	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	21	A1,B125,B135,B137,B16,B42,B43,B63,B79,B86,C16,C29,C30,C31,C39,C46,C5,C64,C66,C8,D2
typical_cds_rare	Chr5	53249938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	3	B23,B35,B53
lof_cds	Chr5	53250065	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	86	A15,A18,A23,A24,A3,A4,A5,A7,B102,B104,B106,B110,B112,B114,B118,B122,B123,B127,B129,B13,B130,B132,B133,B134,B136,B14,B17,B19,B24,B25,B27,B28,B3,B33,B34,B38,B39,B4,B47,B49,B50,B52,B55,B65,B66,B67,B73,B78,B85,B88,B91,B97,C10,C12,C19,C22,C23,C29,C30,C33,C34,C35,C37,C40,C42,C48,C49,C51,C56,C57,C58,C59,C63,C65,C7,C71,C74,C75,C77,C79,C81,C83,C85,C87,D11,D9
typical_cds_rare	Chr5	53250067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B140
lof_cds	Chr5	53250085	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	2	A7,B114
typical_cds_rare	Chr5	53250085	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	2	A7,B114
typical_cds_rare	Chr5	53250089	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	4	B139,B53,C13,D2
lof_cds	Chr5	53250090	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	9	A18,B110,B124,B16,B6,B8,B88,C22,C67
lof_cds	Chr5	53250093	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	145	A10,A11,A13,A15,A16,A19,A2,A20,A22,A23,A24,A3,A4,A5,A6,A7,A8,A9,B10,B101,B103,B104,B105,B106,B107,B108,B109,B11,B111,B112,B114,B117,B118,B119,B12,B121,B123,B126,B127,B129,B131,B132,B134,B135,B138,B140,B15,B2,B21,B22,B24,B25,B27,B3,B31,B34,B35,B41,B43,B45,B47,B49,B5,B56,B58,B59,B60,B61,B65,B67,B69,B7,B73,B74,B76,B79,B8,B83,B84,B85,B93,B95,B96,B99,C1,C10,C11,C13,C14,C17,C18,C19,C2,C20,C22,C23,C24,C25,C27,C28,C3,C34,C35,C36,C38,C4,C40,C41,C42,C43,C45,C47,C48,C49,C50,C51,C52,C53,C55,C58,C59,C6,C60,C61,C62,C63,C65,C69,C72,C73,C76,C77,C78,C79,C8,C80,C81,C83,C84,C86,C87,C9,D10,D5,D8
lof_cds	Chr5	53250094	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B35
typical_cds_rare	Chr5	53250094	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B35
lof_cds	Chr5	53250115	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	55	A22,A3,B107,B12,B120,B122,B129,B13,B133,B134,B135,B21,B24,B27,B30,B32,B36,B37,B38,B39,B4,B40,B45,B46,B47,B5,B50,B52,B54,B60,B61,B63,B66,B74,B76,B79,B88,B91,B93,B99,C19,C23,C4,C5,C51,C54,C55,C57,C64,C66,C74,C79,C83,C85,D8
lof_cds	Chr5	53250126	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	16	B1,B100,B109,B2,B54,B60,B64,B68,B95,C25,C27,C40,C54,C67,C82,D7
lof_cds	Chr5	53250134	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	3	A21,B49,C27
typical_cds_rare	Chr5	53250134	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	3	A21,B49,C27
typical_cds_rare	Chr5	53250161	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	2	B21,D1
typical_cds_rare	Chr5	53250185	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	C75
lof_cds	Chr5	53250242	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B12
typical_cds_rare	Chr5	53250242	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B12
typical_cds_rare	Chr5	53250245	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	2	C12,D6
typical_cds_rare	Chr5	53250247	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B80
lof_cds	Chr5	53250257	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	35	A19,A2,A22,A23,A6,A7,B105,B107,B109,B55,B56,B72,B76,B79,B80,B93,B96,B99,C16,C19,C3,C34,C42,C48,C52,C58,C61,C65,C77,C78,C84,C86,C9,D5,D6
typical_cds_rare	Chr5	53250259	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	B12
lof_cds	Chr5	53250272	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	139	A1,A10,A13,A16,A19,A21,A22,A23,A25,B1,B100,B102,B103,B105,B109,B11,B110,B113,B115,B117,B119,B121,B122,B123,B124,B125,B127,B128,B131,B132,B137,B138,B139,B14,B140,B17,B18,B19,B2,B20,B21,B28,B29,B31,B33,B34,B36,B37,B4,B40,B41,B42,B43,B44,B47,B48,B5,B50,B54,B55,B56,B57,B58,B6,B64,B7,B72,B73,B75,B77,B78,B80,B81,B83,B84,B86,B87,B89,B9,B90,B92,B93,B94,B97,B98,B99,C12,C16,C19,C22,C23,C24,C26,C29,C3,C30,C31,C32,C33,C36,C37,C39,C4,C40,C43,C44,C45,C46,C47,C5,C54,C56,C58,C60,C61,C62,C64,C65,C66,C68,C7,C71,C72,C73,C74,C75,C78,C79,C80,C82,C84,C87,D1,D2,D3,D4,D5,D6,D8
typical_cds_rare	Chr5	53250304	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	2	A23,B101
lof_cds	Chr5	53250319	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	C13
typical_cds_rare	Chr5	53250319	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	C13
typical_cds_rare	Chr5	53250341	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	1	C3
lof_cds	Chr5	53250362	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	4	B15,B22,B90,C84
typical_cds_rare	Chr5	53250362	GCC	G	INDEL	2bp_deletion	CDS_variant	LOC131026117	SmilChr05G003952	131026117	rna-XM_057955885.1	4	B15,B22,B90,C84