source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr5	54495121	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	28	A20,B10,B107,B11,B113,B114,B123,B13,B134,B27,B30,B32,B42,B53,B63,B67,B8,B86,C10,C26,C38,C44,C58,C87,D11,D2,D6,D8
lof_cds	Chr5	54495130	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	1	B8
typical_cds_rare	Chr5	54495130	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	1	B8
typical_cds_rare	Chr5	54495135	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	1	D3
lof_cds	Chr5	54495147	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	1	B68
typical_cds_rare	Chr5	54495147	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	1	B68
lof_cds	Chr5	54495151	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	1	B68
typical_cds_rare	Chr5	54495151	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	1	B68
lof_cds	Chr5	54495164	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	51	A14,A19,A20,A24,A3,A6,B10,B107,B11,B113,B114,B119,B123,B125,B131,B133,B135,B20,B30,B32,B34,B35,B42,B53,B68,B75,B79,B8,B81,B86,C18,C26,C28,C33,C35,C38,C44,C48,C51,C58,C61,C66,C69,C72,C87,C9,D10,D11,D2,D7,D8
lof_cds	Chr5	54495212	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	6	B125,B38,B39,B48,B52,C20
lof_cds	Chr5	54495213	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	73	A11,A14,A15,A19,A2,A20,A21,A24,A3,A4,B10,B102,B104,B107,B11,B113,B114,B115,B119,B12,B123,B131,B137,B14,B140,B20,B22,B30,B32,B35,B40,B42,B53,B59,B62,B68,B71,B75,B78,B81,B84,B86,B91,B96,B99,C11,C12,C18,C23,C26,C28,C29,C31,C33,C35,C38,C48,C49,C51,C58,C6,C61,C65,C66,C69,C72,C73,C78,C86,C9,D2,D7,D8
lof_cds	Chr5	54495217	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	80	A1,A11,A14,A15,A19,A2,A20,A21,A3,B10,B103,B104,B105,B107,B11,B115,B123,B125,B131,B137,B14,B20,B22,B23,B32,B35,B36,B38,B39,B40,B42,B45,B48,B52,B59,B62,B63,B68,B71,B73,B75,B78,B86,B90,B91,B92,B96,B99,C1,C11,C12,C14,C18,C20,C23,C26,C31,C33,C35,C36,C38,C49,C51,C58,C6,C61,C62,C65,C66,C69,C72,C73,C78,C81,C82,C86,C9,D2,D7,D8
lof_cds	Chr5	54495218	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	5	B102,B119,B30,B81,C61
typical_cds_rare	Chr5	54495218	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	5	B102,B119,B30,B81,C61
lof_cds	Chr5	54495225	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	102	A1,A11,A14,A15,A18,A19,A2,A20,A21,A24,A3,A4,A7,B10,B102,B103,B104,B105,B107,B11,B113,B114,B115,B119,B12,B123,B125,B131,B137,B14,B140,B20,B22,B23,B30,B32,B35,B36,B37,B38,B39,B40,B42,B48,B52,B53,B59,B62,B63,B68,B71,B73,B75,B78,B81,B84,B86,B90,B91,B92,B96,B99,C1,C11,C12,C14,C15,C18,C20,C23,C24,C26,C28,C29,C31,C33,C35,C36,C38,C42,C47,C48,C49,C51,C58,C6,C61,C62,C65,C66,C69,C70,C72,C73,C78,C81,C82,C86,C9,D2,D7,D8
typical_cds_rare	Chr5	54495242	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	4	B72,B90,B92,C21
lof_cds	Chr5	54495287	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	66	A18,A20,A23,A25,A4,A7,B10,B100,B101,B103,B104,B107,B109,B11,B114,B125,B132,B136,B14,B2,B30,B33,B38,B39,B42,B43,B45,B49,B52,B53,B62,B64,B68,B74,B75,B78,B80,B81,B84,B96,C1,C12,C18,C2,C23,C24,C25,C28,C33,C35,C37,C44,C46,C47,C48,C58,C72,C73,C81,C84,C86,C9,D2,D6,D7,D8
lof_cds	Chr5	54495291	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	70	A14,A18,A20,A23,A25,A4,A7,B10,B100,B101,B103,B104,B107,B109,B11,B114,B123,B125,B132,B136,B14,B2,B30,B33,B38,B39,B42,B43,B45,B52,B53,B6,B62,B64,B68,B75,B78,B80,B81,B84,B94,B96,C1,C12,C18,C2,C23,C24,C25,C28,C31,C33,C35,C37,C44,C46,C47,C48,C58,C72,C73,C81,C83,C84,C86,C9,D2,D6,D7,D8
lof_cds	Chr5	54495305	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	106	A10,A18,A20,A22,A23,A25,A4,A6,A7,B10,B100,B102,B103,B104,B107,B109,B11,B114,B12,B120,B123,B125,B128,B132,B134,B136,B14,B2,B20,B24,B25,B30,B33,B34,B36,B38,B39,B42,B43,B45,B46,B49,B5,B52,B53,B54,B56,B58,B6,B61,B62,B64,B65,B66,B68,B7,B71,B73,B74,B75,B78,B80,B81,B82,B84,B89,B94,B96,C1,C12,C15,C16,C18,C19,C2,C23,C24,C25,C26,C28,C30,C33,C35,C37,C39,C44,C47,C48,C51,C58,C59,C62,C72,C73,C75,C78,C8,C81,C83,C84,C86,C9,D10,D2,D6,D8
typical_cds_rare	Chr5	54498007	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025115	SmilChr05G004052	131025115	rna-XM_057954730.1	1	D3