source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr6	39259111	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	A14,C36
typical_cds_rare	Chr6	39259138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	B30
typical_cds_rare	Chr6	39259190	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	5	A14,B13,B24,C36,D10
typical_cds_rare	Chr6	39259198	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	B125
lof_cds	Chr6	39259218	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	37	A1,A10,A19,A4,A7,B1,B121,B124,B127,B139,B14,B18,B19,B20,B21,B23,B25,B30,B4,B41,B51,B57,B67,B72,B74,B78,B85,B9,C1,C10,C11,C20,C35,C41,C65,C69,C87
typical_cds_rare	Chr6	39259241	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	4	B114,B28,B86,C24
typical_cds_rare	Chr6	39259273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	C52,C74
typical_cds_rare	Chr6	39259334	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	A14,C36
lof_cds	Chr6	39259337	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	C17
typical_cds_rare	Chr6	39259337	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	C17
lof_cds	Chr6	39259338	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	4	A16,B7,C17,C30
typical_cds_rare	Chr6	39259338	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	4	A16,B7,C17,C30
lof_cds	Chr6	39259350	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	164	A1,A10,A16,A18,A19,A20,A23,A24,A25,A3,A4,A8,A9,B1,B10,B100,B101,B104,B105,B106,B109,B11,B111,B112,B113,B115,B119,B120,B121,B122,B123,B124,B125,B126,B127,B128,B13,B131,B132,B133,B134,B135,B136,B137,B138,B14,B140,B15,B16,B17,B18,B24,B25,B27,B28,B31,B32,B33,B34,B37,B38,B39,B4,B45,B46,B47,B48,B49,B50,B51,B52,B54,B55,B57,B58,B59,B6,B60,B61,B63,B65,B66,B7,B70,B72,B73,B74,B76,B77,B8,B82,B84,B85,B86,B87,B88,B89,B91,B93,B95,B98,C1,C10,C11,C12,C15,C17,C19,C2,C20,C21,C25,C27,C29,C3,C30,C31,C32,C34,C35,C36,C38,C39,C4,C40,C41,C42,C43,C46,C48,C5,C51,C52,C54,C56,C57,C58,C59,C6,C61,C62,C64,C65,C66,C67,C69,C70,C71,C72,C74,C75,C76,C80,C83,C84,C87,C9,D1,D10,D11,D2,D3,D5,D8
lof_cds	Chr6	39259361	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	162	A1,A10,A16,A18,A19,A20,A23,A24,A25,A3,A4,A8,A9,B1,B10,B100,B104,B105,B106,B107,B109,B111,B112,B113,B115,B119,B120,B121,B122,B123,B124,B125,B126,B127,B128,B13,B131,B132,B133,B134,B135,B136,B137,B138,B14,B140,B15,B16,B17,B18,B24,B25,B27,B28,B31,B32,B33,B34,B37,B38,B39,B4,B45,B46,B47,B48,B49,B50,B51,B52,B54,B55,B57,B58,B59,B6,B60,B61,B63,B65,B66,B7,B70,B72,B73,B74,B76,B77,B8,B82,B84,B85,B86,B87,B88,B89,B91,B93,B95,B98,C1,C10,C11,C12,C15,C17,C19,C2,C20,C21,C25,C27,C29,C3,C30,C31,C32,C34,C35,C36,C38,C39,C4,C40,C41,C42,C43,C46,C48,C5,C51,C52,C54,C56,C57,C59,C6,C61,C62,C64,C65,C66,C67,C69,C70,C71,C72,C74,C75,C76,C80,C83,C84,C87,C9,D1,D10,D11,D2,D3,D5,D8
typical_cds_rare	Chr6	39259381	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	B119,C20
typical_cds_rare	Chr6	39259382	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	3	B1,B107,B131
typical_cds_rare	Chr6	39259385	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	4	A22,B4,B44,C3
typical_cds_rare	Chr6	39259428	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	5	A16,B1,B65,B7,C30
lof_cds	Chr6	39259429	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	114	A1,A16,A18,A20,A23,A24,A25,A3,A4,A8,A9,B10,B100,B101,B103,B104,B105,B106,B107,B113,B115,B119,B121,B122,B123,B125,B127,B128,B13,B131,B132,B133,B134,B135,B136,B137,B138,B16,B17,B2,B24,B27,B31,B32,B33,B37,B38,B39,B45,B46,B48,B49,B52,B53,B54,B55,B57,B6,B60,B61,B63,B65,B7,B70,B72,B76,B8,B82,B85,B86,B87,B88,B89,B93,C1,C11,C12,C15,C17,C2,C20,C25,C3,C30,C31,C34,C35,C36,C39,C4,C40,C42,C43,C46,C48,C56,C57,C59,C6,C61,C64,C66,C67,C70,C74,C76,C80,C82,C83,C84,C9,D1,D3,D8
lof_cds	Chr6	39259434	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	128	A1,A10,A16,A18,A19,A20,A23,A24,A25,A3,A4,A8,A9,B10,B100,B101,B103,B104,B105,B106,B107,B11,B113,B115,B119,B121,B122,B123,B124,B125,B127,B128,B13,B131,B132,B133,B134,B135,B137,B138,B139,B14,B16,B17,B18,B2,B23,B24,B25,B27,B31,B32,B33,B37,B38,B39,B4,B41,B45,B46,B48,B49,B52,B53,B54,B55,B57,B58,B6,B60,B61,B63,B65,B7,B70,B72,B76,B8,B82,B85,B86,B87,B88,B89,B93,C1,C11,C12,C15,C17,C2,C20,C25,C3,C30,C31,C34,C35,C36,C39,C4,C40,C41,C42,C43,C46,C48,C56,C57,C59,C6,C61,C64,C66,C67,C69,C70,C74,C76,C80,C82,C83,C84,C87,C9,D1,D3,D8
lof_cds	Chr6	39259436	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	17	A1,A13,B120,B128,B139,B20,B27,B49,B55,B78,B98,C10,C12,C4,C60,C63,C71
lof_cds	Chr6	39259552	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	C17
typical_cds_rare	Chr6	39259552	C	CA	INDEL	1bp_insertion	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	C17
lof_cds	Chr6	39259560	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	80	A1,A10,A18,A19,A20,A23,A24,A25,A8,A9,B100,B103,B104,B105,B106,B11,B113,B115,B119,B121,B122,B123,B124,B128,B13,B131,B136,B137,B16,B2,B23,B25,B38,B4,B41,B45,B46,B47,B48,B50,B55,B57,B59,B6,B61,B65,B66,B7,B72,B73,B77,B82,B85,B93,B98,C17,C2,C23,C25,C31,C34,C36,C38,C43,C48,C52,C56,C58,C64,C66,C69,C70,C71,C75,C76,C77,C9,D3,D7,D8
lof_cds	Chr6	39259571	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	D11
typical_cds_rare	Chr6	39259571	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	D11
lof_cds	Chr6	39259585	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	A10,B48
typical_cds_rare	Chr6	39259585	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	A10,B48
lof_cds	Chr6	39259602	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	4	A16,B90,B92,C83
typical_cds_rare	Chr6	39259602	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	4	A16,B90,B92,C83
typical_cds_rare	Chr6	39259607	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	4	B107,B94,C13,C87
lof_cds	Chr6	39259632	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	7	B11,B6,C15,C76,C77,D7,D8
typical_cds_rare	Chr6	39259637	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	A22,B44
lof_cds	Chr6	39259640	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	50	A10,A11,A22,A23,A24,A25,A3,B10,B100,B106,B118,B122,B125,B131,B139,B14,B2,B22,B31,B35,B39,B44,B51,B57,B58,B70,B74,B75,B76,B77,B84,B90,B92,B97,C1,C12,C26,C40,C41,C47,C49,C51,C56,C59,C65,C71,C80,C81,C83,D4
lof_cds	Chr6	39259649	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	11	A14,A24,A5,B117,B140,B22,B46,B71,B90,C55,D10
typical_cds_rare	Chr6	39259662	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	B114
lof_cds	Chr6	39259709	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	68	A18,A19,A21,A25,A9,B100,B101,B104,B105,B106,B113,B118,B119,B121,B122,B123,B130,B131,B132,B133,B136,B137,B138,B14,B16,B17,B32,B38,B4,B45,B47,B49,B50,B55,B57,B59,B6,B61,B65,B66,B70,B76,B93,C11,C15,C2,C20,C21,C23,C25,C27,C3,C34,C36,C41,C43,C51,C56,C62,C69,C75,C76,C77,C82,D11,D3,D7,D8
lof_cds	Chr6	39259712	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	15	A18,B104,B118,B119,B123,B130,B136,B28,B45,B61,B66,C21,C25,C27,C69
lof_cds	Chr6	39259720	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	60	A19,A21,A25,A9,B100,B101,B104,B105,B106,B112,B113,B121,B122,B131,B132,B133,B137,B138,B14,B16,B17,B32,B38,B4,B47,B49,B50,B52,B55,B57,B59,B6,B61,B65,B70,B76,B93,C11,C15,C2,C20,C23,C3,C34,C35,C36,C39,C41,C43,C51,C56,C62,C75,C76,C82,D11,D2,D3,D7,D8
typical_cds_rare	Chr6	39259740	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	3	B59,C43,C82
lof_cds	Chr6	39259772	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	3	B1,B117,B26
typical_cds_rare	Chr6	39259772	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	3	B1,B117,B26
lof_cds	Chr6	39259775	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	67	A10,A19,A20,A21,A25,B104,B105,B106,B111,B113,B115,B118,B119,B121,B130,B131,B132,B133,B134,B136,B137,B138,B16,B17,B28,B32,B4,B45,B47,B49,B50,B51,B55,B57,B59,B6,B65,B7,B70,B79,B93,B99,C11,C15,C2,C20,C21,C25,C27,C3,C34,C36,C41,C43,C47,C51,C56,C62,C66,C76,C8,C82,D11,D2,D3,D7,D8
lof_cds	Chr6	39259782	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	64	A10,A19,A20,A21,A25,B104,B105,B106,B111,B113,B115,B119,B121,B130,B131,B132,B133,B134,B136,B137,B138,B16,B17,B2,B28,B32,B4,B45,B47,B50,B51,B55,B57,B59,B6,B65,B7,B70,B93,B99,C11,C15,C2,C20,C21,C25,C27,C3,C34,C35,C36,C41,C43,C51,C62,C66,C76,C82,C84,D11,D2,D3,D7,D8
typical_cds_rare	Chr6	39259787	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	B119,C38
typical_cds_rare	Chr6	39259791	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	D11
lof_cds	Chr6	39259801	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	C87
typical_cds_rare	Chr6	39259801	T	TG	INDEL	1bp_insertion	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	C87
lof_cds	Chr6	39259820	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	D11
typical_cds_rare	Chr6	39259820	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	D11
typical_cds_rare	Chr6	39259867	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	3	B130,C65,C86
lof_cds	Chr6	39259871	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	14	A20,B113,B118,B133,B136,B33,B55,B65,C25,C34,C36,C6,D7,D8
lof_cds	Chr6	39259876	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	14	A20,B113,B118,B133,B136,B33,B55,B65,C25,C34,C36,C6,D7,D8
typical_cds_rare	Chr6	39259877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	3	B1,B104,B65
lof_cds	Chr6	39259880	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	13	A20,B113,B118,B136,B33,B55,B65,C25,C34,C36,C6,D7,D8
lof_cds	Chr6	39259883	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	12	A20,B113,B118,B136,B33,B55,B65,C25,C34,C36,D7,D8
typical_cds_rare	Chr6	39259937	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	B13
typical_cds_rare	Chr6	39259948	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	B23,C30
lof_cds	Chr6	39260018	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	B7,C30
typical_cds_rare	Chr6	39260018	GC	G	INDEL	1bp_deletion	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	2	B7,C30
typical_cds_rare	Chr6	39260019	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	5	B107,B131,C13,C49,C70
typical_cds_rare	Chr6	39260027	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	1	B136
lof_cds	Chr6	39260030	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	3	B107,B131,C49
typical_cds_rare	Chr6	39260030	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	3	B107,B131,C49
typical_cds_rare	Chr6	39260051	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990897	SmilChr06G002718	130990897	rna-XM_057915125.1	5	B112,B15,B63,B77,B83