source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr6	41123446	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	D7
typical_cds_rare	Chr6	41123446	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	D7
typical_cds_rare	Chr6	41123458	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	A11,B11,B34,C63
typical_cds_rare	Chr6	41123467	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B114,B71,C45
typical_cds_rare	Chr6	41123506	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	A5,B8
typical_cds_rare	Chr6	41123525	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B118,C86
lof_cds	Chr6	41123539	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	25	A3,A4,B115,B12,B125,B129,B140,B16,B2,B34,B50,B99,C13,C21,C27,C30,C33,C36,C39,C4,C41,C47,C83,D10,D7
typical_cds_rare	Chr6	41123685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B26
lof_cds	Chr6	41123697	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B120
typical_cds_rare	Chr6	41123697	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B120
lof_cds	Chr6	41123720	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	A7,B23,B26
typical_cds_rare	Chr6	41123720	CT	C	INDEL	1bp_deletion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	A7,B23,B26
lof_cds	Chr6	41123723	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	14	A15,A2,B12,B4,C15,C3,C48,C62,C65,C70,C79,C81,C9,D10
typical_cds_rare	Chr6	41123734	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B42,B43
typical_cds_rare	Chr6	41123739	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	5	A10,A7,B129,B26,B89
lof_cds	Chr6	41123775	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	209	A10,A11,A13,A14,A16,A18,A19,A2,A20,A21,A22,A23,A24,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B105,B107,B109,B11,B110,B112,B113,B114,B115,B117,B118,B119,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B130,B131,B132,B133,B134,B135,B136,B137,B139,B14,B140,B15,B16,B18,B19,B2,B20,B22,B23,B24,B25,B26,B27,B28,B29,B3,B31,B32,B34,B35,B37,B38,B39,B4,B41,B42,B43,B44,B46,B47,B48,B5,B50,B51,B53,B54,B56,B57,B58,B59,B6,B60,B61,B62,B64,B65,B66,B67,B68,B69,B7,B71,B72,B73,B75,B76,B78,B79,B8,B80,B81,B82,B84,B85,B86,B87,B88,B9,B91,B93,B95,B96,B97,B98,C1,C10,C12,C14,C15,C17,C18,C19,C2,C20,C21,C22,C24,C25,C27,C28,C29,C3,C31,C33,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C55,C56,C57,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C69,C71,C73,C74,C76,C77,C78,C8,C80,C81,C83,C84,C85,C86,C87,C9,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr6	41123794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B122,B131,B22,B74
typical_cds_rare	Chr6	41123797	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B104
lof_cds	Chr6	41123802	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	9	B100,B45,B57,B63,B64,B83,B90,B92,C23
lof_cds	Chr6	41123803	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B47,D3,D4
typical_cds_rare	Chr6	41123803	T	TG	INDEL	1bp_insertion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B47,D3,D4
typical_cds_rare	Chr6	41123812	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B38,C60
typical_cds_rare	Chr6	41123815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B104
lof_cds	Chr6	41123920	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	8	B108,B33,B49,B61,B81,C58,C78,C79
typical_cds_rare	Chr6	41123939	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	D10,D11
typical_cds_rare	Chr6	41123968	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B120,B139
typical_cds_rare	Chr6	41123981	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	A6,B66
lof_cds	Chr6	41123982	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	18	A5,B106,B123,B135,B47,B53,B56,B74,B8,B83,B95,B96,C2,C27,C44,C6,C69,C72
typical_cds_rare	Chr6	41123989	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	A11,C61,C85
typical_cds_rare	Chr6	41123995	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	A3
typical_cds_rare	Chr6	41124014	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B14,C34,C75,D3
lof_cds	Chr6	41124036	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	39	A20,A22,A6,B119,B126,B129,B16,B29,B31,B37,B43,B45,B50,B53,B6,B65,B66,B69,B71,B78,B80,B82,B91,C1,C16,C17,C26,C38,C43,C45,C50,C53,C57,C63,C74,C8,C83,C87,D2
typical_cds_rare	Chr6	41124039	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B125,C24,C84
typical_cds_rare	Chr6	41124041	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B17,B94,C41
typical_cds_rare	Chr6	41124048	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B17,B94,C41
lof_cds	Chr6	41124049	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B17,B94,C41
typical_cds_rare	Chr6	41124049	T	TA	INDEL	1bp_insertion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B17,B94,C41
lof_cds	Chr6	41124050	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	49	A19,A20,A5,A9,B104,B107,B111,B117,B121,B122,B123,B18,B22,B24,B29,B33,B40,B6,B62,B72,B76,B78,B83,B87,B93,B97,B98,C12,C22,C23,C24,C25,C28,C39,C43,C54,C56,C60,C65,C69,C74,C78,C82,C83,D1,D2,D4,D6,D8
lof_cds	Chr6	41124068	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	16	A1,A25,B111,B118,B132,B21,B28,B77,B90,B92,B99,C28,C30,C37,C54,C75
lof_cds	Chr6	41124071	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	5	A1,B51,B7,B73,C4
typical_cds_rare	Chr6	41124071	GC	G	INDEL	1bp_deletion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	5	A1,B51,B7,B73,C4
lof_cds	Chr6	41124073	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	47	A1,A19,A5,A9,B104,B107,B111,B121,B122,B123,B13,B137,B18,B22,B24,B33,B35,B40,B51,B6,B62,B7,B72,B73,B74,B76,B78,B87,B93,B98,C12,C22,C24,C25,C28,C39,C4,C43,C56,C60,C70,C78,C86,D1,D2,D6,D8
typical_cds_rare	Chr6	41124080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B108,B36,C58,D5
typical_cds_rare	Chr6	41124090	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B46
typical_cds_rare	Chr6	41124092	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	5	B108,B36,C58,C79,D5
lof_cds	Chr6	41124117	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	7	B118,B140,B15,B67,B97,C46,C71
typical_cds_rare	Chr6	41124124	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B140,B97,C46
typical_cds_rare	Chr6	41124159	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B111
typical_cds_rare	Chr6	41124183	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	5	A3,B106,B124,B135,C54
typical_cds_rare	Chr6	41124237	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B42,B43
typical_cds_rare	Chr6	41124257	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B106
lof_cds	Chr6	41124274	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B33,B40,B53,C2
typical_cds_rare	Chr6	41124274	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B33,B40,B53,C2
lof_cds	Chr6	41124275	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B104
typical_cds_rare	Chr6	41124275	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B104
lof_cds	Chr6	41124300	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B26,C14
typical_cds_rare	Chr6	41124300	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B26,C14
typical_cds_rare	Chr6	41124305	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B33
typical_cds_rare	Chr6	41124312	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B27,B33
lof_cds	Chr6	41124313	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B1,B131,B54,C35
typical_cds_rare	Chr6	41124313	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B1,B131,B54,C35
typical_cds_rare	Chr6	41124337	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B128,B15,B27,B73
typical_cds_rare	Chr6	41124346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	C43
typical_cds_rare	Chr6	41124366	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B134,B40,C2
typical_cds_rare	Chr6	41124376	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B24
typical_cds_rare	Chr6	41124396	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B90,B92,C53
typical_cds_rare	Chr6	41124398	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	5	A24,B28,B37,C83,D3
typical_cds_rare	Chr6	41124415	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	C20
typical_cds_rare	Chr6	41124478	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B128,B138,B27,B33
lof_cds	Chr6	41124480	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	42	A10,A11,A16,A18,A9,B10,B105,B11,B113,B124,B136,B137,B138,B14,B17,B26,B3,B38,B39,B46,B5,B54,B58,B6,B64,B65,B73,B75,B85,B86,C27,C48,C51,C52,C53,C54,C58,C60,C63,C78,C84,C9
typical_cds_rare	Chr6	41124531	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	5	A2,B32,B7,B80,C61
typical_cds_rare	Chr6	41124561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B128,B33
lof_cds	Chr6	41124576	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B28,B33
typical_cds_rare	Chr6	41124576	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B28,B33
typical_cds_rare	Chr6	41124593	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	3	B101,B48,B66
typical_cds_rare	Chr6	41124599	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	C42
lof_cds	Chr6	41124614	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B122
typical_cds_rare	Chr6	41124614	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B122
typical_cds_rare	Chr6	41124638	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	4	B75,C4,C46,D3
lof_cds	Chr6	41124643	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	C34,D4
typical_cds_rare	Chr6	41124643	GT	G	INDEL	1bp_deletion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	C34,D4
typical_cds_rare	Chr6	41124644	TC	*	INDEL	1bp_deletion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	C34,D4
typical_cds_rare	Chr6	41124647	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	5	A24,B18,B28,B33,C55
typical_cds_rare	Chr6	41124655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B75
lof_cds	Chr6	41124671	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B122
typical_cds_rare	Chr6	41124671	GC	G	INDEL	1bp_deletion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B122
typical_cds_rare	Chr6	41124681	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B1
typical_cds_rare	Chr6	41124727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B95
typical_cds_rare	Chr6	41124740	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	5	B108,B69,B95,C4,C46
lof_cds	Chr6	41124741	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	17	B104,B108,B128,B130,B24,B33,B43,B61,B79,C1,C26,C34,C4,C58,C78,D10,D5
lof_cds	Chr6	41124745	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B43
typical_cds_rare	Chr6	41124745	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	1	B43
lof_cds	Chr6	41124747	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	C34,D3
typical_cds_rare	Chr6	41124747	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	C34,D3
lof_cds	Chr6	41124749	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	11	B108,B24,B33,B61,B79,C1,C26,C58,C78,C79,D5
lof_cds	Chr6	41124765	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	12	B108,B24,B33,B55,B61,B79,C1,C26,C58,C78,C79,D5
typical_cds_rare	Chr6	41124767	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989579	SmilChr06G002833	130989579	rna-XM_057913561.1	2	B54,C35
