source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr6	41468093	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	4	B137,B22,B43,C44
typical_cds_rare	Chr6	41468149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	5	B134,B137,B49,C25,C69
typical_cds_rare	Chr6	41468165	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	B41
lof_cds	Chr6	41468172	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	70	A10,A11,A13,A16,A18,A20,A23,A24,A3,A5,A9,B1,B100,B106,B117,B127,B128,B131,B134,B135,B14,B15,B2,B26,B35,B45,B53,B54,B59,B61,B7,B71,B75,B76,B79,B86,B89,B93,B97,C10,C18,C19,C20,C28,C3,C32,C33,C46,C49,C5,C53,C57,C59,C61,C63,C64,C7,C70,C73,C74,C75,C78,C82,C83,C85,C86,C9,D3,D7,D9
lof_cds	Chr6	41468173	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	109	A1,A10,A13,A16,A18,A20,A23,A24,A3,A5,A6,A7,A9,B1,B100,B106,B107,B112,B114,B117,B121,B124,B127,B128,B131,B134,B135,B137,B14,B15,B17,B2,B24,B25,B26,B28,B29,B3,B35,B45,B47,B48,B52,B53,B54,B56,B57,B59,B61,B7,B71,B75,B76,B79,B86,B88,B89,B93,B95,B96,B97,B99,C18,C19,C20,C23,C24,C25,C28,C3,C31,C32,C33,C35,C43,C44,C45,C46,C48,C49,C5,C50,C52,C53,C56,C57,C59,C61,C62,C63,C64,C7,C70,C73,C74,C75,C76,C78,C79,C82,C83,C84,C85,C86,C9,D3,D6,D7,D9
typical_cds_rare	Chr6	41468178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B88,C75
lof_cds	Chr6	41468185	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	C26
typical_cds_rare	Chr6	41468185	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	C26
typical_cds_rare	Chr6	41468187	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	C26
lof_cds	Chr6	41468214	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	17	A14,A18,A21,B2,B28,B46,B55,B70,B78,B81,B82,C23,C62,C68,C87,D11,D4
lof_cds	Chr6	41468238	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	30	A1,A6,B124,B133,B137,B17,B24,B25,B28,B29,B3,B47,B48,B52,B56,B57,B79,B95,B99,C24,C25,C31,C35,C40,C50,C52,C62,C65,C84,D6
lof_cds	Chr6	41468406	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B134,C52
typical_cds_rare	Chr6	41468406	CTG	C	INDEL	2bp_deletion	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B134,C52
lof_cds	Chr6	41468408	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	34	A14,A18,A21,A22,A6,B108,B111,B12,B126,B130,B135,B2,B22,B26,B28,B46,B54,B55,B71,B75,B78,B81,B91,C19,C24,C29,C32,C41,C62,C81,C82,C87,D4,D5
typical_cds_rare	Chr6	41468424	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B134,C52
typical_cds_rare	Chr6	41468425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B134,C52
lof_cds	Chr6	41468459	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	5	B22,B5,B53,C26,C76
typical_cds_rare	Chr6	41468459	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	5	B22,B5,B53,C26,C76
typical_cds_rare	Chr6	41468474	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B107,B122
typical_cds_rare	Chr6	41468497	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B32,B36
lof_cds	Chr6	41468584	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	45	A1,A20,B109,B112,B114,B121,B124,B133,B134,B137,B21,B25,B28,B3,B47,B49,B52,B56,B57,B6,B70,B79,B81,B88,B89,B95,B96,C10,C15,C23,C34,C40,C43,C44,C45,C48,C50,C55,C56,C62,C78,C79,C85,D5,D9
lof_cds	Chr6	41468587	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	7	A22,B14,B59,C3,C44,C58,C87
lof_cds	Chr6	41468590	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	45	A10,A14,A21,A22,A6,B108,B111,B12,B126,B128,B130,B135,B137,B2,B22,B26,B28,B3,B45,B46,B54,B55,B70,B71,B75,B78,B81,B82,B91,C19,C23,C24,C29,C32,C41,C54,C62,C68,C79,C81,C82,C87,D11,D4,D5
lof_cds	Chr6	41468596	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	49	A1,A20,B109,B112,B114,B121,B122,B124,B133,B134,B137,B16,B21,B25,B27,B28,B3,B47,B49,B52,B56,B57,B6,B70,B79,B81,B88,B89,B95,B96,C10,C15,C23,C34,C40,C41,C43,C44,C45,C48,C50,C55,C56,C62,C78,C79,C84,C85,D5
typical_cds_rare	Chr6	41468626	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	C44,C80
typical_cds_rare	Chr6	41468644	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	C24,C87
lof_cds	Chr6	41468663	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	28	A14,A22,B108,B12,B126,B128,B130,B135,B137,B22,B26,B28,B36,B46,B54,B55,B71,B75,B81,B91,C19,C2,C24,C29,C32,C79,C81,C82
typical_cds_rare	Chr6	41468668	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	3	B114,B43,B59
lof_cds	Chr6	41468714	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B43,B59
typical_cds_rare	Chr6	41468714	CAG	C	INDEL	2bp_deletion	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B43,B59
typical_cds_rare	Chr6	41468727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B35,B85
lof_cds	Chr6	41468757	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	108	A1,A11,A20,A23,A24,A6,A7,A8,A9,B10,B100,B101,B104,B107,B109,B112,B113,B114,B119,B120,B121,B122,B124,B130,B131,B132,B133,B134,B137,B14,B140,B17,B19,B20,B21,B24,B25,B27,B28,B29,B3,B30,B35,B37,B4,B42,B43,B45,B47,B48,B49,B56,B57,B59,B6,B67,B68,B69,B70,B79,B81,B85,B88,B89,B9,B90,B92,B95,B96,B97,C10,C12,C15,C23,C24,C25,C29,C3,C30,C31,C34,C35,C40,C41,C44,C45,C48,C50,C51,C52,C55,C56,C57,C58,C65,C66,C76,C78,C79,C80,C82,C84,C85,C87,D10,D5,D6,D9
typical_cds_rare	Chr6	41468779	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	B10
lof_cds	Chr6	41468780	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	4	B16,B58,C33,C43
typical_cds_rare	Chr6	41468780	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	4	B16,B58,C33,C43
lof_cds	Chr6	41468805	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	38	A23,A24,A9,B10,B109,B111,B113,B133,B137,B16,B20,B21,B24,B28,B3,B47,B48,B52,B57,B88,B90,B95,B96,C10,C12,C23,C30,C33,C34,C35,C40,C44,C45,C5,C55,C56,C76,D10
lof_cds	Chr6	41468808	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	33	B10,B109,B111,B113,B133,B137,B16,B20,B21,B28,B3,B47,B48,B52,B57,B88,B90,B95,B96,C10,C12,C23,C30,C33,C34,C35,C40,C44,C45,C5,C55,C76,D10
typical_cds_rare	Chr6	41468817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	B120
lof_cds	Chr6	41468825	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B86,B93
typical_cds_rare	Chr6	41468825	CGT	C	INDEL	2bp_deletion	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	2	B86,B93
typical_cds_rare	Chr6	41468840	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	B41
typical_cds_rare	Chr6	41468872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	B84
lof_cds	Chr6	41468878	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	12	B103,B120,B126,B139,B3,B33,B34,B71,B81,C19,D6,D8
lof_cds	Chr6	41468882	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	B29
typical_cds_rare	Chr6	41468882	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	B29
typical_cds_rare	Chr6	41468947	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	B43
lof_cds	Chr6	41468965	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	13	A20,B14,B24,B37,B52,B9,C10,C22,C23,C24,C55,C87,D5
lof_cds	Chr6	41468975	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	6	B121,B70,B89,B99,C79,D9
typical_cds_rare	Chr6	41468983	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	1	B42
lof_cds	Chr6	41468987	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	59	A11,A16,A21,A25,A5,A7,A8,B1,B100,B12,B123,B124,B125,B136,B140,B15,B25,B27,B31,B32,B35,B36,B40,B41,B47,B49,B5,B56,B57,B63,B74,B80,B95,B96,B99,C1,C17,C18,C26,C31,C32,C34,C40,C43,C47,C49,C55,C65,C68,C71,C72,C76,C80,C83,C86,C9,D1,D6,D9
lof_cds	Chr6	41468990	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	59	A11,A16,A21,A25,A5,A7,A8,B1,B100,B12,B123,B124,B125,B136,B140,B15,B25,B27,B31,B32,B35,B36,B40,B41,B47,B49,B5,B56,B57,B63,B74,B80,B95,B96,B99,C1,C17,C18,C26,C31,C32,C34,C40,C43,C47,C49,C55,C65,C68,C71,C72,C76,C80,C83,C86,C9,D1,D6,D9
lof_cds	Chr6	41469020	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC130989608	SmilChr06G002864	130989608	rna-XM_057913624.1	7	B109,B133,B48,C12,C40,C44,C55