source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	884174	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	1	C39
lof_cds	Chr7	884240	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	144	A13,A14,A15,A19,A20,A21,A22,A25,A3,A4,A5,A8,B1,B10,B101,B102,B103,B105,B106,B110,B111,B113,B114,B115,B117,B119,B120,B122,B123,B124,B125,B126,B127,B129,B130,B134,B135,B137,B14,B140,B15,B18,B2,B20,B22,B26,B28,B3,B31,B33,B36,B40,B42,B43,B44,B49,B50,B52,B53,B54,B55,B59,B63,B64,B65,B68,B7,B70,B71,B73,B74,B75,B77,B78,B8,B80,B81,B83,B84,B85,B88,B89,B9,B94,B95,B97,B98,B99,C11,C12,C14,C16,C18,C19,C21,C23,C24,C25,C26,C27,C28,C29,C30,C31,C32,C34,C35,C36,C37,C38,C4,C40,C43,C46,C48,C5,C52,C53,C54,C56,C59,C6,C60,C64,C66,C68,C69,C7,C70,C71,C72,C75,C76,C77,C79,C81,C84,C86,C87,C9,D4,D6,D7,D9
lof_cds	Chr7	884250	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B45,C55
typical_cds_rare	Chr7	884250	T	TG	INDEL	1bp_insertion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B45,C55
lof_cds	Chr7	884283	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B106,B3,B64,D9
typical_cds_rare	Chr7	884283	CT	C	INDEL	1bp_deletion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B106,B3,B64,D9
typical_cds_rare	Chr7	884285	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	A15,B38
lof_cds	Chr7	884288	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B36,B97
typical_cds_rare	Chr7	884288	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B36,B97
typical_cds_rare	Chr7	884297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B4,C15
typical_cds_rare	Chr7	884352	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	3	B111,C12,D7
lof_cds	Chr7	884416	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	47	A10,A5,A8,B106,B111,B112,B114,B124,B16,B21,B22,B26,B3,B43,B48,B49,B5,B50,B54,B56,B60,B64,B67,B8,B84,B85,B89,B92,B97,C12,C3,C43,C49,C5,C52,C53,C54,C55,C58,C61,C66,C7,C79,D5,D7,D8,D9
lof_cds	Chr7	884419	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	47	A10,A5,A8,B106,B111,B112,B114,B124,B16,B21,B22,B26,B3,B43,B48,B49,B5,B50,B54,B56,B60,B64,B67,B8,B84,B85,B89,B92,B97,C12,C3,C43,C49,C5,C52,C53,C54,C55,C58,C61,C66,C7,C79,D5,D7,D8,D9
lof_cds	Chr7	884421	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	47	A10,A5,A8,B106,B111,B112,B114,B124,B16,B21,B22,B26,B3,B43,B48,B49,B5,B50,B54,B56,B60,B64,B67,B8,B84,B85,B89,B92,B97,C12,C3,C43,C49,C5,C52,C53,C54,C55,C58,C61,C66,C7,C79,D5,D7,D8,D9
typical_cds_rare	Chr7	884426	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B49,B94,C64,C66
lof_cds	Chr7	884436	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	9	B124,B43,B50,B89,C12,C5,C52,D7,D8
lof_cds	Chr7	884438	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	37	A14,A20,A25,A3,A4,A8,B10,B122,B123,B125,B135,B3,B40,B44,B45,B52,B73,B74,B77,B78,B83,B95,B98,C11,C19,C24,C29,C32,C42,C43,C58,C72,C81,C82,C87,D10,D7
lof_cds	Chr7	884441	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	37	A14,A18,A20,A25,A3,A4,A8,B10,B122,B123,B125,B135,B3,B40,B44,B45,B52,B73,B74,B77,B78,B83,B95,B98,C11,C24,C29,C32,C42,C43,C58,C72,C81,C82,C87,D10,D7
lof_cds	Chr7	884445	T	TC	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	14	B124,B26,B43,B50,B8,B84,B89,B92,C12,C5,C52,C55,D7,D8
lof_cds	Chr7	884449	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	22	A14,A20,A25,A3,A4,A8,B135,B40,B44,B45,B49,B73,B77,B95,B98,C11,C24,C29,C32,C43,C81,C87
lof_cds	Chr7	884454	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	1	C66
typical_cds_rare	Chr7	884454	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	1	C66
lof_cds	Chr7	884557	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	10	A20,B105,B120,B135,B3,B40,B73,B80,C34,C81
lof_cds	Chr7	884564	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	12	A20,B105,B120,B135,B20,B3,B40,B73,B80,C27,C34,C81
typical_cds_rare	Chr7	884567	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	1	C74
typical_cds_rare	Chr7	884589	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	A11,C17
lof_cds	Chr7	884608	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	34	A14,A23,A8,B100,B102,B103,B107,B114,B14,B25,B3,B44,B45,B56,B6,B69,B74,B79,B85,B86,B89,C19,C23,C24,C27,C44,C5,C64,C7,C76,C82,D1,D10,D9
typical_cds_rare	Chr7	885068	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	5	B36,B74,B88,C17,C37
typical_cds_rare	Chr7	885082	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	1	B104
typical_cds_rare	Chr7	885142	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B134,C36
lof_cds	Chr7	885145	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	16	A13,A15,A3,B1,B120,B138,B18,B20,B24,B28,B44,B52,B81,B88,B89,C35
lof_cds	Chr7	885158	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	14	A13,A3,B1,B103,B120,B138,B20,B28,B44,B52,B89,C35,C46,C81
lof_cds	Chr7	885161	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	6	A13,A4,B18,B24,B6,C29
typical_cds_rare	Chr7	885221	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	1	C29
typical_cds_rare	Chr7	885278	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B47,D3
lof_cds	Chr7	885298	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	3	C11,C29,D2
typical_cds_rare	Chr7	885298	A	AT	INDEL	1bp_insertion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	3	C11,C29,D2
lof_cds	Chr7	885596	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B138,B77,C38,C70
typical_cds_rare	Chr7	885596	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B138,B77,C38,C70
lof_cds	Chr7	885599	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B138,B77,C38,C70
typical_cds_rare	Chr7	885599	TGC	T	INDEL	2bp_deletion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B138,B77,C38,C70
typical_cds_rare	Chr7	885613	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B138,B77,C38,C70
lof_cds	Chr7	885625	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	84	A13,A14,A20,A21,A4,A8,A9,B10,B102,B104,B112,B117,B121,B122,B125,B131,B138,B140,B16,B18,B2,B20,B21,B24,B25,B30,B32,B38,B39,B42,B45,B47,B52,B57,B6,B60,B61,B62,B63,B64,B74,B75,B77,B8,B83,B85,B86,B89,B91,B97,C19,C20,C23,C24,C28,C29,C30,C31,C37,C39,C40,C44,C46,C47,C48,C5,C52,C56,C59,C6,C60,C61,C64,C68,C71,C72,C73,C76,C79,C80,C84,D10,D2,D5
lof_cds	Chr7	885628	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	6	B21,B24,B27,B86,C49,C73
typical_cds_rare	Chr7	885643	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	1	B104
lof_cds	Chr7	885677	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B45,C62
typical_cds_rare	Chr7	885677	C	CA	INDEL	1bp_insertion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B45,C62
typical_cds_rare	Chr7	885749	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	3	B114,C16,C25
lof_cds	Chr7	885797	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	21	A13,A19,B1,B131,B20,B25,B61,B63,B83,C14,C19,C24,C31,C51,C56,C59,C61,C62,C64,C72,C9
lof_cds	Chr7	885822	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	10	A22,A7,B18,B30,B75,B77,B8,B93,C12,C32
lof_cds	Chr7	885827	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	9	A22,A7,B18,B30,B75,B8,B93,C12,C32
typical_cds_rare	Chr7	885837	TTA	*	INDEL	2bp_deletion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	5	A22,A7,B18,B30,C32
lof_cds	Chr7	885842	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B75,B77,B8,B93
typical_cds_rare	Chr7	885842	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	4	B75,B77,B8,B93
typical_cds_rare	Chr7	885882	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991344	SmilChr07G000148	130991344	rna-XM_057915502.1	2	B8,B93