source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	892232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B103,B130,B20
typical_cds_rare	Chr7	892255	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B140,B26,C87
typical_cds_rare	Chr7	892318	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B140,B19,B26
typical_cds_rare	Chr7	892345	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B140,B19,B26
typical_cds_rare	Chr7	892353	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B140,B19,B26
typical_cds_rare	Chr7	892362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B140,B19,B26
typical_cds_rare	Chr7	892366	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B140,B19,B26
lof_cds	Chr7	892376	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B140,B19,B26
typical_cds_rare	Chr7	892376	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B140,B19,B26
typical_cds_rare	Chr7	892423	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	A11,C17,C23
typical_cds_rare	Chr7	892649	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	A14,B2,B57
typical_cds_rare	Chr7	893085	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	5	A1,B101,B84,B90,C21
typical_cds_rare	Chr7	893090	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B132,B2,B57
typical_cds_rare	Chr7	893104	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	1	C52
lof_cds	Chr7	893185	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	24	A14,A3,A5,A9,B102,B117,B128,B130,B132,B32,B47,B49,B58,B6,B66,C11,C26,C37,C47,C60,C70,C87,D7,D9
lof_cds	Chr7	893203	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	101	A15,A21,A23,A25,A3,A5,A6,A7,A9,B10,B102,B105,B112,B113,B121,B123,B128,B129,B13,B130,B132,B133,B135,B18,B19,B21,B22,B27,B30,B31,B32,B33,B34,B36,B41,B44,B47,B49,B52,B56,B57,B58,B61,B63,B64,B66,B68,B69,B7,B72,B73,B74,B75,B82,B83,B85,B88,B89,B9,B96,B97,B99,C1,C13,C14,C15,C16,C17,C22,C24,C26,C3,C37,C39,C42,C43,C44,C46,C47,C48,C49,C5,C52,C54,C57,C59,C60,C61,C67,C68,C70,C76,C78,C82,C85,C87,C9,D11,D5,D7,D9
lof_cds	Chr7	893206	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	107	A1,A10,A14,A16,A5,A6,A9,B103,B104,B107,B108,B11,B110,B111,B114,B117,B120,B122,B125,B126,B128,B129,B130,B132,B134,B16,B18,B19,B2,B21,B23,B24,B28,B29,B32,B35,B37,B40,B41,B42,B46,B47,B48,B5,B50,B53,B54,B58,B6,B60,B61,B62,B64,B68,B69,B7,B71,B72,B78,B85,B86,B87,B90,B94,B98,C11,C12,C15,C18,C19,C2,C20,C21,C22,C26,C29,C37,C39,C41,C42,C44,C45,C47,C48,C49,C57,C58,C60,C61,C62,C63,C69,C70,C73,C74,C79,C8,C80,C81,C84,C85,C86,C87,D2,D3,D6,D9
lof_cds	Chr7	893213	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	23	B108,B134,B20,B28,B29,B35,B48,B5,B60,B7,B71,B72,B87,B98,C41,C45,C62,C63,C73,C74,C81,C84,D2
lof_cds	Chr7	893217	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	23	B108,B134,B20,B28,B29,B35,B48,B5,B60,B7,B71,B72,B87,B98,C41,C45,C62,C63,C73,C74,C81,C84,D2
lof_cds	Chr7	893218	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	123	A14,A15,A21,A23,A25,A3,A4,A5,A6,A7,A9,B1,B10,B102,B105,B112,B113,B117,B122,B123,B125,B126,B128,B129,B13,B130,B132,B133,B134,B135,B18,B19,B2,B21,B22,B24,B27,B30,B31,B32,B33,B34,B36,B41,B44,B47,B49,B52,B55,B56,B57,B58,B6,B61,B63,B64,B66,B68,B69,B72,B73,B74,B75,B78,B82,B83,B85,B88,B89,B9,B96,B97,B99,C1,C11,C13,C14,C15,C16,C17,C22,C23,C24,C26,C3,C32,C37,C39,C41,C42,C43,C44,C46,C47,C48,C49,C5,C52,C54,C57,C59,C60,C61,C62,C66,C67,C68,C69,C70,C72,C74,C76,C78,C80,C82,C85,C87,C9,D10,D11,D5,D7,D9
typical_cds_rare	Chr7	893242	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B128,B15,B25
typical_cds_rare	Chr7	893263	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	5	B51,B72,C12,C83,D1
typical_cds_rare	Chr7	893275	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	4	A10,B3,C61,C87
lof_cds	Chr7	893360	T	TC	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	209	A10,A13,A14,A16,A2,A21,A22,A23,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B105,B107,B108,B109,B11,B110,B111,B112,B113,B115,B118,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B133,B134,B135,B136,B137,B138,B139,B140,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B28,B29,B3,B30,B31,B33,B34,B35,B36,B37,B38,B39,B4,B41,B43,B44,B45,B46,B48,B5,B50,B51,B52,B53,B55,B58,B59,B6,B60,B61,B66,B67,B7,B70,B71,B72,B73,B74,B75,B76,B77,B79,B8,B80,B81,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C25,C26,C28,C29,C30,C32,C33,C34,C36,C37,C39,C40,C41,C42,C43,C44,C45,C46,C47,C49,C5,C50,C51,C53,C54,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C71,C72,C73,C74,C75,C77,C78,C79,C80,C81,C82,C84,C85,C86,C87,D1,D10,D11,D2,D3,D4,D5,D6,D8
typical_cds_rare	Chr7	893386	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	4	B103,B115,B20,B7
lof_cds	Chr7	893442	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	13	A23,B113,B117,B135,B14,B15,B18,B75,B86,B90,C3,C42,C68
typical_cds_rare	Chr7	893458	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	1	C16
typical_cds_rare	Chr7	893461	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	C41,C6,C80
typical_cds_rare	Chr7	893516	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	B43,B44,B79
typical_cds_rare	Chr7	893533	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	1	B104
lof_cds	Chr7	893635	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	6	A18,A5,B123,B15,C14,C66
lof_cds	Chr7	893641	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	211	A1,A10,A11,A13,A14,A16,A18,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A9,B1,B100,B101,B102,B103,B104,B105,B106,B108,B109,B11,B111,B112,B113,B117,B119,B12,B120,B121,B122,B123,B124,B126,B127,B128,B129,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B140,B15,B16,B17,B18,B19,B2,B20,B21,B23,B24,B26,B28,B29,B3,B30,B31,B32,B35,B36,B37,B38,B39,B4,B40,B41,B42,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B58,B59,B6,B60,B61,B62,B64,B66,B67,B7,B70,B71,B72,B73,B74,B75,B78,B8,B80,B81,B83,B84,B85,B86,B87,B88,B89,B9,B91,B93,B94,B95,B97,B98,B99,C1,C11,C12,C13,C14,C16,C17,C18,C19,C2,C21,C22,C23,C24,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C43,C44,C45,C47,C48,C49,C5,C51,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C67,C68,C69,C7,C71,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C86,C87,D1,D10,D11,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr7	893645	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	211	A1,A10,A11,A13,A14,A16,A18,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A9,B1,B100,B101,B102,B103,B104,B105,B106,B108,B109,B11,B111,B112,B113,B117,B119,B12,B120,B121,B122,B123,B124,B126,B127,B128,B129,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B140,B15,B16,B17,B18,B19,B2,B20,B21,B23,B24,B26,B28,B29,B3,B30,B31,B32,B35,B36,B37,B38,B39,B4,B40,B41,B42,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B58,B59,B6,B60,B61,B62,B64,B66,B67,B7,B70,B71,B72,B73,B74,B75,B78,B8,B80,B81,B83,B84,B85,B86,B87,B88,B89,B9,B91,B93,B94,B95,B97,B98,B99,C1,C11,C12,C13,C14,C16,C17,C18,C19,C2,C21,C22,C23,C24,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C43,C44,C45,C47,C48,C49,C5,C51,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C67,C68,C69,C7,C71,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C86,C87,D1,D10,D11,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr7	893646	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	210	A1,A10,A11,A13,A14,A16,A18,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A9,B1,B100,B101,B102,B103,B104,B105,B106,B108,B109,B11,B111,B112,B113,B117,B119,B12,B120,B121,B122,B123,B124,B126,B127,B128,B129,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B140,B15,B16,B17,B18,B19,B2,B20,B21,B23,B24,B26,B28,B29,B3,B30,B31,B32,B35,B36,B37,B38,B39,B4,B40,B41,B42,B44,B45,B46,B47,B48,B49,B50,B51,B52,B53,B54,B55,B56,B58,B59,B6,B60,B61,B62,B64,B66,B67,B7,B70,B71,B72,B73,B74,B75,B78,B8,B80,B81,B83,B84,B85,B86,B87,B88,B89,B9,B91,B93,B94,B95,B97,B98,B99,C1,C11,C12,C13,C14,C16,C17,C18,C19,C2,C21,C22,C23,C24,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C43,C44,C45,C47,C48,C49,C5,C51,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C67,C68,C69,C7,C71,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C86,C87,D1,D10,D11,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr7	893662	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	33	A14,A20,A22,B106,B132,B138,B19,B26,B3,B31,B32,B42,B47,B51,B54,B56,B64,B72,B91,C12,C18,C24,C31,C35,C4,C44,C55,C75,C77,C8,C83,D7,D9
typical_cds_rare	Chr7	893676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	2	A16,B2
typical_cds_rare	Chr7	893748	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	2	B50,B57
typical_cds_rare	Chr7	893815	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	1	B78
typical_cds_rare	Chr7	893899	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	5	C1,C17,C31,C4,C49
lof_cds	Chr7	893909	A	AGC	INDEL	2bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	C1,C4,C49
typical_cds_rare	Chr7	893909	A	AGC	INDEL	2bp_insertion	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	C1,C4,C49
typical_cds_rare	Chr7	893913	GA	*	INDEL	1bp_deletion	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	C1,C4,C49
lof_cds	Chr7	893916	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	C1,C4,C49
typical_cds_rare	Chr7	893916	CT	C	INDEL	1bp_deletion	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	C1,C4,C49
lof_cds	Chr7	893917	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	18	A14,A22,B122,B138,B14,B140,B19,B2,B31,B32,B57,B72,C11,C12,C26,C43,C6,C77
lof_cds	Chr7	893921	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	17	A14,A22,B122,B138,B14,B140,B19,B2,B31,B32,B57,C11,C12,C26,C43,C6,C77
lof_cds	Chr7	893923	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	5	C1,C17,C31,C4,C49
typical_cds_rare	Chr7	893923	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	5	C1,C17,C31,C4,C49
lof_cds	Chr7	893926	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	C17,C31,C49
typical_cds_rare	Chr7	893926	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	C17,C31,C49
lof_cds	Chr7	893929	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	5	C1,C17,C31,C4,C49
typical_cds_rare	Chr7	893929	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	5	C1,C17,C31,C4,C49
lof_cds	Chr7	893941	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	17	A14,A22,B122,B138,B14,B140,B19,B2,B31,B32,B57,C11,C12,C26,C43,C6,C77
typical_cds_rare	Chr7	893946	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	3	C1,C4,C49
lof_cds	Chr7	894017	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	59	A13,A19,A3,A4,A8,A9,B102,B109,B110,B117,B119,B120,B122,B125,B127,B15,B18,B2,B20,B22,B33,B43,B50,B51,B52,B53,B59,B6,B63,B8,B85,B87,B88,B91,B94,B98,C10,C11,C19,C20,C30,C33,C40,C43,C48,C51,C54,C56,C59,C6,C64,C69,C71,C74,C76,C84,C87,D5,D8
lof_cds	Chr7	894020	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	5	C1,C17,C31,C4,C49
typical_cds_rare	Chr7	894020	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	5	C1,C17,C31,C4,C49
lof_cds	Chr7	894021	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC130991336	SmilChr07G000150	130991336	rna-XM_057915478.1	59	A13,A19,A3,A4,A8,A9,B102,B109,B110,B117,B119,B120,B122,B125,B127,B15,B18,B2,B20,B22,B25,B33,B43,B50,B51,B52,B53,B59,B6,B63,B8,B85,B87,B88,B91,B94,B98,C10,C11,C19,C20,C30,C33,C40,C43,C48,C51,C54,C56,C59,C6,C64,C69,C71,C74,C76,C84,C87,D8