source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	899806	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	34	A19,A20,A4,A5,A6,B101,B112,B12,B122,B136,B21,B37,B41,B46,B47,B49,B5,B50,B51,B54,B57,B72,B79,C40,C52,C55,C56,C58,C64,C66,C77,C79,C83,D11
lof_cds	Chr7	899867	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	17	A4,A5,A8,B102,B112,B122,B32,B37,B41,B46,B5,B50,B54,B57,C55,C79,D11
lof_cds	Chr7	899875	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	16	A4,A5,A8,B102,B112,B122,B23,B32,B37,B41,B46,B54,B57,C55,C79,D11
lof_cds	Chr7	899947	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	38	A19,A4,A5,A6,A8,B102,B112,B121,B122,B133,B15,B21,B23,B25,B26,B32,B37,B41,B46,B47,B55,B57,B62,B91,C22,C3,C39,C40,C51,C54,C55,C57,C58,C66,C67,C75,C79,D11
typical_cds_rare	Chr7	900120	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	B98,C16,C20,C40,C5
lof_cds	Chr7	900138	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	4	B25,B46,B62,B65
typical_cds_rare	Chr7	900138	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	4	B25,B46,B62,B65
lof_cds	Chr7	900154	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	4	B18,B25,B46,B62
typical_cds_rare	Chr7	900154	CGG	C	INDEL	2bp_deletion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	4	B18,B25,B46,B62
typical_cds_rare	Chr7	900191	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	3	B25,B46,B62
typical_cds_rare	Chr7	900309	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	B132,B26,B80,C51,C58
lof_cds	Chr7	901179	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	11	B135,B48,B52,B55,B66,B74,C50,C57,C62,C63,C78
lof_cds	Chr7	901184	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	10	B135,B48,B52,B55,B66,B74,C57,C62,C63,C78
lof_cds	Chr7	901189	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	B66,B74
typical_cds_rare	Chr7	901189	A	AT	INDEL	1bp_insertion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	B66,B74
lof_cds	Chr7	901193	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	B66,B74
typical_cds_rare	Chr7	901193	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	B66,B74
lof_cds	Chr7	901211	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	41	A13,A14,A18,A23,A6,A9,B106,B108,B126,B135,B140,B2,B26,B37,B47,B49,B53,B55,B6,B62,B63,B69,B79,C11,C12,C14,C18,C20,C24,C3,C44,C47,C48,C50,C51,C52,C61,C69,C72,C9,D2
lof_cds	Chr7	901212	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	24	A4,A7,B113,B12,B135,B22,B27,B29,B48,B55,B60,B66,B7,B74,B83,B97,C17,C3,C54,C57,C62,C63,C78,C81
lof_cds	Chr7	901214	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	24	A4,A7,B113,B12,B135,B22,B27,B29,B48,B55,B60,B66,B7,B74,B83,B97,C17,C3,C54,C57,C62,C63,C78,C81
lof_cds	Chr7	901219	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	22	A23,A4,B106,B135,B27,B55,B6,B63,B7,B83,B97,C11,C17,C18,C20,C3,C50,C54,C62,C69,C72,D2
lof_cds	Chr7	901239	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	25	A4,A7,B113,B12,B135,B22,B27,B29,B48,B55,B60,B66,B7,B74,B83,B97,C17,C3,C39,C54,C57,C62,C63,C78,C81
lof_cds	Chr7	901245	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	45	A18,A23,A4,A7,B106,B113,B12,B135,B22,B26,B27,B29,B48,B55,B6,B60,B63,B66,B7,B74,B83,B97,C11,C12,C14,C17,C18,C20,C29,C3,C39,C47,C50,C52,C54,C57,C61,C62,C63,C69,C72,C78,C81,C9,D2
lof_cds	Chr7	901248	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B49,B62,B79,C51
typical_cds_rare	Chr7	901248	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B49,B62,B79,C51
lof_cds	Chr7	901322	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	10	A7,B37,B8,B85,C11,C14,C3,C59,C63,C87
typical_cds_rare	Chr7	901405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	B38,B39
lof_cds	Chr7	901488	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	1	C82
typical_cds_rare	Chr7	901488	TAA	T	INDEL	2bp_deletion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	1	C82
typical_cds_rare	Chr7	901525	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	4	B12,B57,B87,C18
typical_cds_rare	Chr7	901610	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	A6,C1
lof_cds	Chr7	901611	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	A6,C1
typical_cds_rare	Chr7	901611	CCT	C	INDEL	2bp_deletion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	A6,C1
lof_cds	Chr7	901614	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	3	A6,C1,C84
typical_cds_rare	Chr7	901614	T	TCG	INDEL	2bp_insertion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	3	A6,C1,C84
typical_cds_rare	Chr7	901624	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	1	B78
lof_cds	Chr7	901632	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B129,C1,C17,C84
typical_cds_rare	Chr7	901632	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B129,C1,C17,C84
lof_cds	Chr7	901635	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B129,C1,C17,C84
typical_cds_rare	Chr7	901635	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B129,C1,C17,C84
lof_cds	Chr7	901669	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	7	A6,B129,B80,C1,C17,C84,D1
lof_cds	Chr7	901675	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	7	A6,B129,B80,C1,C17,C84,D1
lof_cds	Chr7	901677	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	7	A6,B129,B80,C1,C17,C84,D1
lof_cds	Chr7	901686	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	8	A6,B106,B129,B80,C1,C80,C84,D1
lof_cds	Chr7	901693	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	8	A6,B106,B129,B80,C1,C80,C84,D1
lof_cds	Chr7	901695	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	7	A6,B106,B129,B80,C1,C84,D1
lof_cds	Chr7	901699	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B129,C1,C84,D1
typical_cds_rare	Chr7	901699	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B129,C1,C84,D1
lof_cds	Chr7	901716	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B129,C1,C84,D1
typical_cds_rare	Chr7	901716	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	5	A6,B129,C1,C84,D1
lof_cds	Chr7	901781	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	3	B106,C65,D1
typical_cds_rare	Chr7	901781	A	AC	INDEL	1bp_insertion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	3	B106,C65,D1
typical_cds_rare	Chr7	901808	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	B106,D1
lof_cds	Chr7	901812	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	1	D1
typical_cds_rare	Chr7	901812	C	CA	INDEL	1bp_insertion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	1	D1
lof_cds	Chr7	901814	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	1	D1
typical_cds_rare	Chr7	901814	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	1	D1
typical_cds_rare	Chr7	901945	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	1	B94
typical_cds_rare	Chr7	901960	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	4	A22,B99,C1,C65
typical_cds_rare	Chr7	901976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991334	SmilChr07G000152	130991334	rna-XM_057915471.1,rna-XM_057915472.1	2	B115,B20