source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	2582611	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	D10
typical_cds_rare	Chr7	2582619	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B75
lof_cds	Chr7	2582644	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	23	A24,A3,B1,B10,B107,B112,B118,B121,B122,B124,B139,B29,B44,B54,C2,C3,C45,C62,C65,C75,C81,C82,D5
lof_cds	Chr7	2582646	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	23	A24,A3,B1,B10,B107,B112,B118,B121,B122,B124,B139,B29,B44,B54,C2,C3,C45,C62,C65,C75,C81,C82,D5
typical_cds_rare	Chr7	2582669	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	D10
lof_cds	Chr7	2582682	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	C86
typical_cds_rare	Chr7	2582682	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	C86
typical_cds_rare	Chr7	2582735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	A6
typical_cds_rare	Chr7	2582737	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	A6
lof_cds	Chr7	2582743	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	42	A24,A7,B10,B101,B104,B107,B108,B117,B12,B121,B125,B128,B130,B131,B138,B39,B4,B42,B55,B60,B64,B7,B70,B82,B90,B97,B98,C11,C16,C27,C28,C34,C35,C45,C67,C73,C74,C8,C83,C9,D1,D6
typical_cds_rare	Chr7	2582749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B72,B85,C56,C65
lof_cds	Chr7	2582755	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	37	A1,A14,A19,A21,A8,B1,B101,B112,B117,B118,B121,B122,B124,B130,B17,B26,B28,B38,B44,B51,B54,B61,B64,B8,C10,C18,C2,C23,C32,C46,C62,C70,C71,C81,C82,C84,C86
lof_cds	Chr7	2582758	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B20
typical_cds_rare	Chr7	2582758	A	ACC	INDEL	2bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B20
lof_cds	Chr7	2582759	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	38	A1,A14,A19,A21,A8,B1,B101,B112,B117,B118,B121,B122,B124,B130,B17,B20,B26,B28,B38,B44,B51,B54,B61,B64,B8,C10,C18,C2,C23,C32,C46,C62,C70,C71,C81,C82,C84,C86
typical_cds_rare	Chr7	2582770	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B110,B72,B85,C56
lof_cds	Chr7	2582771	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	90	A1,A14,A19,A2,A21,A24,A6,A7,B1,B10,B100,B101,B107,B108,B109,B112,B114,B117,B118,B12,B121,B122,B124,B125,B128,B130,B131,B138,B17,B26,B30,B38,B39,B4,B41,B42,B44,B45,B51,B53,B54,B55,B60,B61,B64,B7,B70,B75,B8,B82,B90,B94,B98,C10,C16,C18,C2,C23,C25,C27,C28,C32,C34,C35,C38,C45,C46,C5,C50,C60,C61,C62,C66,C67,C69,C70,C71,C73,C74,C77,C8,C81,C82,C83,C84,C86,C9,D1,D11,D9
lof_cds	Chr7	2582777	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	52	A2,A24,A6,A7,B10,B100,B101,B107,B108,B109,B114,B117,B12,B125,B128,B130,B131,B138,B39,B4,B40,B42,B45,B49,B53,B60,B64,B7,B70,B75,B82,B90,B94,B98,C16,C25,C27,C28,C35,C38,C45,C5,C61,C66,C67,C73,C74,C8,C83,C9,D1,D11
lof_cds	Chr7	2582785	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	66	A2,A23,A24,A4,A6,A7,B10,B100,B101,B104,B107,B108,B109,B113,B114,B117,B12,B121,B125,B128,B130,B131,B138,B25,B29,B34,B39,B4,B40,B42,B45,B46,B53,B64,B66,B7,B70,B75,B78,B82,B90,B97,B98,C16,C25,C27,C28,C3,C35,C38,C45,C5,C53,C61,C66,C67,C73,C74,C77,C8,C83,C85,C9,D1,D11,D5
lof_cds	Chr7	2582787	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	64	A2,A23,A24,A4,A7,B10,B100,B101,B104,B107,B108,B109,B113,B114,B117,B12,B121,B125,B128,B130,B131,B138,B25,B29,B34,B39,B4,B40,B42,B45,B46,B53,B60,B64,B66,B7,B70,B75,B78,B82,B97,B98,C16,C25,C27,C28,C3,C35,C45,C5,C53,C61,C66,C67,C73,C74,C77,C8,C83,C85,C9,D1,D11,D5
lof_cds	Chr7	2582788	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	126	A1,A14,A15,A18,A19,A2,A20,A21,A25,A3,A8,A9,B1,B105,B108,B109,B111,B112,B113,B115,B118,B12,B120,B121,B122,B124,B129,B13,B131,B132,B133,B134,B136,B137,B139,B15,B17,B19,B2,B20,B24,B26,B28,B29,B3,B30,B31,B33,B35,B37,B38,B39,B4,B41,B44,B51,B52,B54,B55,B56,B57,B59,B61,B64,B65,B70,B71,B72,B75,B76,B77,B8,B81,B86,B9,B91,B93,B96,B97,C1,C10,C12,C13,C16,C17,C18,C19,C2,C20,C23,C25,C26,C28,C29,C31,C32,C34,C36,C37,C43,C46,C5,C52,C55,C6,C60,C61,C62,C63,C65,C69,C70,C71,C73,C74,C77,C81,C82,C83,C84,C86,C9,D2,D4,D7,D9
lof_cds	Chr7	2582791	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	A6,B21
typical_cds_rare	Chr7	2582791	CG	C	INDEL	1bp_deletion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	A6,B21
typical_cds_rare	Chr7	2582807	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	A6,B21
typical_cds_rare	Chr7	2582810	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B13,C63
lof_cds	Chr7	2582838	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	16	A7,B110,B124,B2,B31,B72,B84,B87,B99,C15,C49,C56,C65,C67,C87,D9
lof_cds	Chr7	2582848	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	16	A7,B110,B124,B2,B31,B69,B72,B84,B87,B99,C15,C49,C65,C67,C87,D9
lof_cds	Chr7	2582854	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B120,B91
typical_cds_rare	Chr7	2582854	T	TG	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B120,B91
lof_cds	Chr7	2582879	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	A6,C24
typical_cds_rare	Chr7	2582879	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	A6,C24
lof_cds	Chr7	2582884	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	A6,C24
typical_cds_rare	Chr7	2582884	T	TC	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	A6,C24
typical_cds_rare	Chr7	2582906	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	A6
typical_cds_rare	Chr7	2582908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B118
lof_cds	Chr7	2582931	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	65	A1,A2,A23,A24,A6,A7,B101,B104,B107,B108,B113,B115,B12,B121,B125,B13,B130,B137,B138,B20,B25,B29,B3,B39,B42,B43,B45,B51,B53,B55,B64,B66,B68,B7,B70,B72,B78,B82,B87,B90,B98,C16,C21,C25,C29,C3,C35,C36,C38,C41,C45,C5,C50,C52,C53,C6,C61,C74,C77,C8,C83,D1,D11,D7,D9
lof_cds	Chr7	2582940	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	58	A1,A2,A23,A24,A6,A7,B101,B104,B107,B113,B115,B121,B125,B13,B130,B137,B138,B20,B25,B29,B3,B45,B53,B55,B61,B64,B68,B7,B72,B78,B82,B87,B90,B98,C15,C16,C21,C25,C29,C3,C35,C36,C38,C41,C45,C5,C50,C52,C53,C6,C61,C74,C80,D1,D11,D5,D7,D9
typical_cds_rare	Chr7	2582966	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	A11,B59,C8
typical_cds_rare	Chr7	2583011	AGT	*	INDEL	2bp_deletion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	C42
lof_cds	Chr7	2583020	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	B28,C27,C7
typical_cds_rare	Chr7	2583020	CGG	C	INDEL	2bp_deletion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	B28,C27,C7
typical_cds_rare	Chr7	2583069	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B11
lof_cds	Chr7	2583165	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B139,B26,B79,C39
typical_cds_rare	Chr7	2583165	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B139,B26,B79,C39
lof_cds	Chr7	2583173	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	B139,B26,C39
typical_cds_rare	Chr7	2583173	GT	G	INDEL	1bp_deletion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	B139,B26,C39
lof_cds	Chr7	2583178	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B117
typical_cds_rare	Chr7	2583178	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B117
lof_cds	Chr7	2583191	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B117,B139,B26,C39
typical_cds_rare	Chr7	2583191	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B117,B139,B26,C39
lof_cds	Chr7	2583194	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B117,B139,B26,C39
typical_cds_rare	Chr7	2583194	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B117,B139,B26,C39
lof_cds	Chr7	2583312	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	25	A14,A18,B119,B126,B127,B128,B135,B140,B48,B51,B57,B70,B98,C15,C18,C28,C32,C48,C62,C64,C66,C68,C79,C84,D5
typical_cds_rare	Chr7	2583343	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B1
typical_cds_rare	Chr7	2583349	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B78,C15
lof_cds	Chr7	2583398	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	A1,B54,C56
typical_cds_rare	Chr7	2583398	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	A1,B54,C56
lof_cds	Chr7	2583407	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B126
typical_cds_rare	Chr7	2583407	T	TA	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B126
lof_cds	Chr7	2583409	A	AG	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B126
typical_cds_rare	Chr7	2583409	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B126
lof_cds	Chr7	2583410	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	B29,B94,C59
typical_cds_rare	Chr7	2583410	T	TA	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	B29,B94,C59
lof_cds	Chr7	2583411	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	B29,B94,C59
typical_cds_rare	Chr7	2583411	G	GTC	INDEL	2bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	3	B29,B94,C59
typical_cds_rare	Chr7	2583418	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B131,B74
typical_cds_rare	Chr7	2583453	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B26,D8
typical_cds_rare	Chr7	2583457	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	C75
typical_cds_rare	Chr7	2583461	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B68
typical_cds_rare	Chr7	2583466	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B26,D8
typical_cds_rare	Chr7	2583473	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B134,B8
typical_cds_rare	Chr7	2583475	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B1,B95
typical_cds_rare	Chr7	2583512	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B140
lof_cds	Chr7	2583611	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	C8
typical_cds_rare	Chr7	2583611	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	C8
typical_cds_rare	Chr7	2583615	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	2	B82,C8
lof_cds	Chr7	2583664	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	32	A22,A24,A9,B101,B102,B137,B16,B19,B22,B41,B5,B50,B52,B54,B56,B63,B73,B89,B90,B92,B96,B99,C19,C22,C36,C44,C49,C53,C6,C80,C87,D3
typical_cds_rare	Chr7	2583688	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B92,C20,C35,C49
lof_cds	Chr7	2583718	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	C82
typical_cds_rare	Chr7	2583718	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	C82
lof_cds	Chr7	2583758	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	5	B102,B133,B90,C30,C8
typical_cds_rare	Chr7	2583758	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	5	B102,B133,B90,C30,C8
typical_cds_rare	Chr7	2583922	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	4	B124,B76,B8,C25
lof_cds	Chr7	2584157	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B57
typical_cds_rare	Chr7	2584157	T	TG	INDEL	1bp_insertion	CDS_variant	LOC130993035	SmilChr07G000384	130993035	rna-XM_057917756.1	1	B57