source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	2717413	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	4	B100,B12,B48,B82
typical_cds_rare	Chr7	2717415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	B131
typical_cds_rare	Chr7	2717519	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	2	B62,C61
typical_cds_rare	Chr7	2717562	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	3	A21,B101,C35
lof_cds	Chr7	2717613	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	28	A19,A20,A4,B12,B121,B126,B130,B16,B27,B36,B40,B45,B46,B55,B66,B7,B78,B99,C11,C21,C29,C3,C48,C69,C74,C8,C80,C83
lof_cds	Chr7	2717615	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	28	A19,A20,A4,B12,B121,B126,B130,B16,B27,B36,B40,B45,B46,B55,B66,B7,B78,B99,C11,C21,C29,C3,C48,C69,C74,C8,C80,C83
typical_cds_rare	Chr7	2717628	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	3	C43,C78,D10
typical_cds_rare	Chr7	2717685	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	A15
typical_cds_rare	Chr7	2717705	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	B80
typical_cds_rare	Chr7	2717711	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	5	A15,B126,B17,B2,C58
typical_cds_rare	Chr7	2717721	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	2	B12,B2
typical_cds_rare	Chr7	2717733	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	C5
typical_cds_rare	Chr7	2717755	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	2	B101,C35
typical_cds_rare	Chr7	2717802	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	2	C64,C66
typical_cds_rare	Chr7	2717821	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	2	A21,B122
lof_cds	Chr7	2717872	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	B77
typical_cds_rare	Chr7	2717872	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	B77
lof_cds	Chr7	2717920	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	167	A1,A16,A18,A19,A2,A20,A21,A24,A25,A3,A4,A7,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B109,B11,B111,B113,B114,B118,B119,B12,B120,B121,B122,B124,B126,B129,B13,B130,B132,B136,B138,B140,B15,B17,B18,B21,B22,B23,B25,B26,B27,B29,B30,B31,B34,B36,B37,B38,B39,B40,B42,B43,B44,B45,B46,B47,B5,B50,B51,B53,B54,B55,B57,B59,B6,B60,B61,B62,B64,B65,B67,B68,B69,B7,B70,B71,B72,B74,B76,B78,B8,B82,B83,B84,B85,B87,B88,B89,B90,B91,B92,B93,B97,B98,B99,C10,C11,C12,C15,C18,C2,C21,C22,C24,C25,C26,C28,C29,C30,C31,C33,C37,C38,C39,C4,C41,C42,C43,C44,C46,C47,C48,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C63,C67,C69,C7,C71,C73,C74,C75,C76,C78,C79,C81,C83,C84,C9,D1,D10,D2,D4,D8,D9
typical_cds_rare	Chr7	2717957	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	D11
lof_cds	Chr7	2717964	G	GT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	135	A1,A10,A16,A18,A19,A22,A23,A3,A4,A5,A6,A7,A8,A9,B100,B102,B107,B108,B115,B117,B119,B12,B122,B126,B127,B134,B135,B137,B138,B139,B16,B18,B19,B20,B22,B23,B25,B26,B27,B31,B32,B33,B35,B36,B37,B40,B41,B43,B46,B47,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B60,B61,B62,B63,B64,B65,B67,B71,B72,B73,B74,B75,B79,B8,B82,B89,B9,B90,B92,B93,B94,B96,B98,B99,C1,C11,C17,C19,C2,C20,C23,C24,C26,C3,C30,C31,C32,C33,C36,C39,C4,C40,C41,C42,C44,C45,C48,C49,C52,C53,C55,C58,C6,C62,C63,C65,C68,C69,C74,C75,C79,C8,C80,C81,C85,C86,C87,D2,D3,D6,D7,D8,D9
lof_cds	Chr7	2717965	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	120	A1,A10,A16,A18,A19,A22,A23,A3,A4,A5,A6,A7,A8,A9,B100,B102,B107,B115,B119,B12,B122,B134,B135,B137,B138,B139,B16,B18,B19,B20,B22,B23,B25,B26,B27,B31,B32,B33,B35,B36,B37,B40,B41,B43,B46,B47,B49,B5,B50,B51,B52,B53,B54,B55,B57,B58,B59,B60,B61,B62,B63,B65,B67,B71,B72,B73,B74,B75,B79,B8,B82,B89,B90,B92,B93,B94,B98,C11,C17,C19,C2,C20,C23,C26,C3,C31,C32,C33,C36,C39,C4,C40,C41,C42,C44,C45,C48,C53,C55,C58,C6,C62,C63,C65,C68,C69,C74,C75,C79,C8,C81,C85,C86,C87,D2,D3,D6,D7,D8,D9
typical_cds_rare	Chr7	2718009	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	5	B106,B123,B134,B85,C72
lof_cds	Chr7	2718021	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	8	B126,B15,B62,C1,C67,C80,D10,D3
typical_cds_rare	Chr7	2718099	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	3	B41,B47,C2
typical_cds_rare	Chr7	2718208	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	D10
typical_cds_rare	Chr7	2718221	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	A18
lof_cds	Chr7	2718301	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	65	A1,A13,A14,A18,A2,A22,A9,B105,B110,B112,B115,B117,B12,B120,B125,B126,B127,B131,B132,B133,B15,B2,B3,B32,B33,B35,B38,B39,B42,B43,B47,B53,B56,B6,B60,B62,B63,B64,B71,B72,B77,B82,B86,B9,B93,C1,C24,C29,C43,C46,C52,C58,C67,C69,C71,C75,C76,C77,C80,C82,C86,D10,D2,D3,D9
lof_cds	Chr7	2718306	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	D2
typical_cds_rare	Chr7	2718306	T	TG	INDEL	1bp_insertion	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	D2
lof_cds	Chr7	2718308	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	D2
typical_cds_rare	Chr7	2718308	TGC	T	INDEL	2bp_deletion	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	D2
lof_cds	Chr7	2718314	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	128	A16,A18,A19,A21,A22,A24,A25,A3,A4,A7,B1,B10,B100,B101,B103,B104,B105,B107,B109,B11,B118,B119,B12,B120,B121,B129,B130,B132,B136,B138,B140,B15,B17,B18,B21,B22,B23,B25,B26,B27,B29,B31,B34,B36,B39,B40,B42,B43,B45,B46,B47,B5,B50,B51,B53,B55,B58,B59,B6,B60,B61,B64,B65,B67,B68,B69,B7,B70,B71,B72,B76,B78,B8,B83,B87,B88,B90,B92,B98,B99,C10,C11,C15,C2,C21,C24,C25,C28,C30,C31,C33,C39,C4,C41,C42,C43,C44,C46,C47,C48,C50,C51,C52,C55,C56,C57,C59,C6,C61,C63,C67,C69,C7,C71,C73,C75,C78,C79,C81,C83,C84,C85,C9,D1,D2,D4,D8,D9
typical_cds_rare	Chr7	2718410	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	2	B125,C78
lof_cds	Chr7	2718474	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	118	A10,A14,A15,A18,A2,A22,A23,A3,A5,A6,A9,B102,B103,B104,B107,B109,B110,B112,B114,B115,B117,B119,B120,B121,B122,B126,B127,B128,B131,B132,B135,B137,B138,B14,B16,B19,B20,B22,B24,B25,B26,B32,B34,B37,B39,B41,B42,B45,B47,B49,B5,B50,B52,B54,B55,B56,B57,B59,B62,B63,B66,B70,B71,B74,B75,B84,B85,B87,B89,B90,B92,B93,B96,B99,C16,C17,C19,C21,C24,C28,C3,C30,C32,C33,C36,C38,C39,C40,C41,C44,C49,C5,C51,C52,C53,C54,C55,C6,C61,C62,C63,C65,C68,C69,C75,C76,C77,C79,C80,C84,C86,C87,D1,D11,D3,D7,D8,D9
typical_cds_rare	Chr7	2718547	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	2	B51,D10
typical_cds_rare	Chr7	2718627	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	B22
lof_cds	Chr7	2718656	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	3	B22,B35,C48
typical_cds_rare	Chr7	2718656	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	3	B22,B35,C48
typical_cds_rare	Chr7	2718659	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	4	B22,B35,B86,C48
lof_cds	Chr7	2718709	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	B86
typical_cds_rare	Chr7	2718709	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	B86
typical_cds_rare	Chr7	2718714	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	C85
lof_cds	Chr7	2718723	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	C50
typical_cds_rare	Chr7	2718723	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	1	C50
typical_cds_rare	Chr7	2718771	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	5	B75,C11,C20,C47,D1
typical_cds_rare	Chr7	2718775	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	5	B75,C11,C20,C47,D1
typical_cds_rare	Chr7	2718785	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993040	SmilChr07G000394	130993040	rna-XM_057917761.1	4	C11,C20,C47,D1