source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	2942895	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	B140
lof_cds	Chr7	2942901	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	71	A16,A18,A22,A24,A3,A9,B101,B102,B11,B114,B120,B124,B132,B14,B140,B16,B17,B21,B22,B28,B29,B31,B33,B42,B43,B47,B5,B50,B51,B52,B53,B58,B59,B60,B61,B65,B69,B70,B80,B86,B87,B89,B92,B93,C13,C14,C17,C18,C24,C30,C31,C36,C41,C44,C45,C49,C52,C53,C56,C57,C59,C6,C65,C67,C7,C75,C76,C82,C84,D11,D4
lof_cds	Chr7	2942943	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	237	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A23,A24,A25,A3,A4,A6,A7,A8,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B115,B117,B118,B119,B12,B121,B122,B123,B124,B126,B127,B128,B129,B13,B130,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B50,B51,B52,B53,B55,B56,B57,B58,B59,B6,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C18,C2,C21,C22,C23,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C55,C56,C57,C58,C59,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C84,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr7	2942945	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	195	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A23,A24,A25,A3,A4,A5,A7,A8,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B11,B111,B112,B117,B119,B12,B121,B123,B126,B127,B128,B129,B13,B130,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B2,B20,B21,B22,B23,B26,B27,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B42,B43,B44,B45,B46,B49,B51,B52,B55,B56,B57,B58,B59,B6,B61,B62,B63,B64,B65,B66,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B89,B90,B91,B95,B96,B97,B98,B99,C1,C11,C12,C14,C15,C16,C18,C2,C21,C23,C25,C27,C28,C29,C3,C32,C34,C35,C38,C40,C41,C43,C45,C46,C47,C48,C49,C50,C51,C52,C53,C55,C56,C57,C58,C59,C60,C61,C63,C64,C65,C66,C67,C68,C69,C7,C72,C73,C74,C76,C77,C78,C79,C8,C80,C81,C84,C86,C87,C9,D1,D10,D11,D3,D5,D6,D7,D9
lof_cds	Chr7	2942948	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	149	A10,A16,A18,A19,A21,A23,A24,A3,A5,A6,A7,B100,B101,B102,B103,B104,B109,B11,B110,B111,B112,B113,B115,B118,B121,B122,B123,B124,B129,B13,B130,B135,B136,B138,B139,B15,B16,B17,B18,B20,B21,B22,B24,B25,B26,B27,B28,B29,B3,B30,B32,B33,B36,B37,B38,B40,B41,B45,B46,B47,B48,B50,B51,B53,B58,B6,B61,B64,B65,B66,B67,B69,B7,B70,B74,B76,B79,B80,B85,B86,B87,B9,B93,B94,B97,C10,C11,C13,C14,C15,C18,C2,C22,C23,C25,C26,C29,C30,C31,C33,C34,C35,C37,C39,C4,C41,C42,C43,C44,C45,C46,C48,C49,C5,C51,C52,C53,C56,C57,C59,C60,C62,C64,C65,C66,C67,C68,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C81,C84,C86,C9,D1,D10,D2,D3,D4,D5,D6,D8
typical_cds_rare	Chr7	2942960	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	A22
lof_cds	Chr7	2943005	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	B43
typical_cds_rare	Chr7	2943005	CT	C	INDEL	1bp_deletion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	B43
typical_cds_rare	Chr7	2943025	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	A14,A23,B1,B103,D6
typical_cds_rare	Chr7	2943074	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	B25
lof_cds	Chr7	2943118	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	2	B133,B9
typical_cds_rare	Chr7	2943118	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	2	B133,B9
lof_cds	Chr7	2943123	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	2	B133,B9
typical_cds_rare	Chr7	2943123	GCC	G	INDEL	2bp_deletion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	2	B133,B9
typical_cds_rare	Chr7	2943124	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	B110,B112,B122,C10,C46
typical_cds_rare	Chr7	2943128	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	A24,C26,C39,D2,D4
lof_cds	Chr7	2943194	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	8	A15,B110,B112,B118,B90,C13,C46,C70
lof_cds	Chr7	2943195	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	45	A1,A11,A14,A19,A9,B1,B10,B105,B115,B117,B119,B127,B129,B130,B133,B135,B20,B26,B54,B58,B61,B64,B67,B72,B84,B93,B94,C18,C2,C23,C28,C31,C32,C33,C45,C5,C64,C66,C68,C74,C78,C81,C85,C86,D5
lof_cds	Chr7	2943196	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	36	A22,A7,B104,B105,B108,B111,B12,B123,B126,B131,B137,B2,B20,B28,B35,B47,B54,B55,B74,B78,B8,B81,B99,C2,C32,C35,C39,C40,C6,C63,C69,C71,C73,C80,C85,C87
typical_cds_rare	Chr7	2943225	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	B135,B44,B51,B57,D5
lof_cds	Chr7	2943253	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B100,C29,D10
typical_cds_rare	Chr7	2943253	A	ACT	INDEL	2bp_insertion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B100,C29,D10
lof_cds	Chr7	2943257	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	2	C29,D10
typical_cds_rare	Chr7	2943257	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	2	C29,D10
lof_cds	Chr7	2943261	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	12	A13,A23,B102,B106,B22,B57,B75,B89,B94,C62,C64,D5
lof_cds	Chr7	2943262	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	4	B10,B117,B58,C31
typical_cds_rare	Chr7	2943262	A	AT	INDEL	1bp_insertion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	4	B10,B117,B58,C31
lof_cds	Chr7	2943263	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	4	B10,B117,B58,C31
typical_cds_rare	Chr7	2943263	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	4	B10,B117,B58,C31
lof_cds	Chr7	2943268	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	7	A13,B102,B106,B57,B89,B94,C62
lof_cds	Chr7	2943271	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	28	A22,A9,B1,B120,B132,B14,B140,B22,B42,B43,B47,B5,B50,B60,B62,B89,B92,C13,C17,C24,C36,C44,C52,C56,C6,C75,C82,C83
lof_cds	Chr7	2943275	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	88	A10,A2,A20,A21,A23,A24,A7,B1,B101,B103,B106,B11,B111,B12,B126,B127,B134,B136,B138,B15,B16,B17,B26,B28,B29,B3,B39,B42,B43,B44,B46,B50,B51,B53,B57,B58,B6,B63,B64,B65,B66,B69,B7,B70,B71,B74,B77,B78,B79,B81,B82,B83,B84,B87,B89,B91,B92,B93,B97,C1,C12,C13,C18,C2,C29,C30,C35,C38,C39,C41,C44,C45,C49,C50,C51,C52,C57,C59,C60,C61,C67,C7,C71,C75,C76,C84,D6,D7
lof_cds	Chr7	2943279	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	78	A10,A2,A20,A21,A23,A7,B101,B103,B106,B11,B111,B12,B126,B127,B134,B136,B138,B15,B16,B17,B26,B28,B29,B3,B39,B44,B46,B50,B51,B53,B57,B58,B6,B63,B64,B65,B66,B69,B7,B70,B71,B74,B77,B78,B79,B81,B82,B83,B84,B87,B91,B93,B97,C1,C12,C13,C18,C2,C30,C35,C38,C39,C41,C45,C49,C51,C52,C57,C59,C60,C61,C67,C7,C71,C76,C84,D6,D7
typical_cds_rare	Chr7	2943287	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	B106,B16,B77,B91,C60
typical_cds_rare	Chr7	2943289	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	A13,B102,B106,B57,C62
typical_cds_rare	Chr7	2943297	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	2	B13,B68
lof_cds	Chr7	2943321	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	B106,B129,B77,B91,C60
typical_cds_rare	Chr7	2943321	GT	G	INDEL	1bp_deletion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	B106,B129,B77,B91,C60
typical_cds_rare	Chr7	2943414	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	A8,B129,C18
typical_cds_rare	Chr7	2943420	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	C42
typical_cds_rare	Chr7	2943520	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	B35
lof_cds	Chr7	2943535	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B20,B93,C23
typical_cds_rare	Chr7	2943535	A	AT	INDEL	1bp_insertion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B20,B93,C23
typical_cds_rare	Chr7	2943551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	B109,B121,B38,B39,B40
typical_cds_rare	Chr7	2943654	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	A24,C26,C39,D2,D4
typical_cds_rare	Chr7	2943682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	4	B25,B76,C42,D8
typical_cds_rare	Chr7	2943696	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	A1
lof_cds	Chr7	2943710	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	7	A14,A23,B103,B26,B3,B32,D6
typical_cds_rare	Chr7	2943822	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	4	A24,C26,D2,D4
typical_cds_rare	Chr7	2943862	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	A14
typical_cds_rare	Chr7	2943889	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	2	B140,C83
typical_cds_rare	Chr7	2943904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	C48
typical_cds_rare	Chr7	2943919	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	5	B112,B118,B122,B74,C70
typical_cds_rare	Chr7	2943923	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	2	A24,C26
lof_cds	Chr7	2944039	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	A15,B109,C40
typical_cds_rare	Chr7	2944039	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	A15,B109,C40
lof_cds	Chr7	2944043	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	8	B113,B132,B70,C17,C26,C44,C48,C59
typical_cds_rare	Chr7	2944088	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	A8
lof_cds	Chr7	2944123	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B3,B36,B97
typical_cds_rare	Chr7	2944123	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B3,B36,B97
typical_cds_rare	Chr7	2944131	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	1	B82
lof_cds	Chr7	2944142	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B124,B18,C42
typical_cds_rare	Chr7	2944142	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B124,B18,C42
lof_cds	Chr7	2944145	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B124,B18,C42
typical_cds_rare	Chr7	2944145	A	ACC	INDEL	2bp_insertion	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B124,B18,C42
typical_cds_rare	Chr7	2944148	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991619	SmilChr07G000422	130991619	rna-XM_057915927.1	3	B127,B66,B74