source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	3504947	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	B101,B36,C10,C14
typical_cds_rare	Chr7	3504961	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	B138,B33
typical_cds_rare	Chr7	3505271	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	5	A24,A5,B46,C13,D2
lof_cds	Chr7	3505311	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	15	A1,A20,A5,A7,B115,B36,B46,B5,B67,B89,C26,C32,C42,C72,D4
lof_cds	Chr7	3505316	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	13	A1,A20,A5,A7,B115,B36,B5,B67,B89,C26,C32,C42,D4
lof_cds	Chr7	3505321	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	13	A1,A20,A5,A7,B115,B36,B5,B67,B89,C26,C32,C42,D4
typical_cds_rare	Chr7	3505418	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	1	C5
lof_cds	Chr7	3505442	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	B12,B133
typical_cds_rare	Chr7	3505442	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	B12,B133
lof_cds	Chr7	3505449	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	B12,B133
typical_cds_rare	Chr7	3505449	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	B12,B133
lof_cds	Chr7	3505454	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	A16,B107
typical_cds_rare	Chr7	3505454	A	ACG	INDEL	2bp_insertion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	A16,B107
typical_cds_rare	Chr7	3505464	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	B12,B133
typical_cds_rare	Chr7	3505480	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	A16,B140,B62,C86
lof_cds	Chr7	3505504	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	B12,B133,B95,C84
typical_cds_rare	Chr7	3505504	G	GC	INDEL	1bp_insertion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	B12,B133,B95,C84
lof_cds	Chr7	3505505	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	1	B114
typical_cds_rare	Chr7	3505505	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	1	B114
lof_cds	Chr7	3505507	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	1	B114
typical_cds_rare	Chr7	3505507	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	1	B114
lof_cds	Chr7	3505510	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	5	B12,B133,B9,B95,C14
typical_cds_rare	Chr7	3505510	TAC	T	INDEL	2bp_deletion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	5	B12,B133,B9,B95,C14
typical_cds_rare	Chr7	3505591	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	3	C40,C60,D8
typical_cds_rare	Chr7	3505599	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	1	B50
typical_cds_rare	Chr7	3505641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	B11,B51,C67,C84
lof_cds	Chr7	3505656	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	25	A13,A25,A7,B115,B122,B125,B133,B16,B25,B4,B65,B66,B67,B71,B94,B95,C13,C29,C31,C40,C43,C5,C61,C68,C77
lof_cds	Chr7	3505668	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	17	A20,B107,B133,B18,B19,B71,B86,B9,B95,C14,C33,C42,C45,C46,C57,C76,D7
lof_cds	Chr7	3505684	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	9	A2,A5,B127,B58,B7,C26,C33,C58,C79
lof_cds	Chr7	3505754	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	58	A13,A14,A2,A20,A25,A4,A7,B105,B108,B109,B111,B115,B121,B122,B124,B125,B127,B128,B13,B133,B139,B16,B17,B25,B27,B34,B36,B39,B4,B45,B58,B61,B65,B66,B67,B71,B74,B82,B94,B95,C13,C15,C17,C20,C25,C29,C31,C40,C43,C48,C5,C58,C61,C63,C68,C77,D5,D7
lof_cds	Chr7	3505755	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	23	A20,A21,B104,B12,B13,B133,B18,B19,B34,B55,B74,B86,B9,B99,C14,C33,C41,C42,C45,C57,C72,C76,C9
lof_cds	Chr7	3505763	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	22	A20,A21,B104,B12,B13,B133,B15,B18,B19,B34,B55,B74,B86,B9,B99,C14,C42,C45,C57,C72,C76,C9
lof_cds	Chr7	3505765	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	22	A20,A21,B104,B12,B13,B133,B15,B18,B19,B34,B55,B74,B86,B9,B99,C14,C42,C45,C57,C72,C76,C9
lof_cds	Chr7	3505826	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	28	A20,A7,B115,B122,B125,B133,B139,B4,B65,B66,B67,B71,B74,B94,B95,C13,C14,C15,C29,C3,C31,C40,C43,C52,C63,C68,C77,D5
lof_cds	Chr7	3505829	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	28	A20,A7,B115,B122,B125,B133,B139,B4,B65,B66,B67,B71,B74,B94,B95,C13,C14,C15,C29,C3,C31,C40,C43,C52,C63,C68,C77,D5
lof_cds	Chr7	3505847	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	28	A20,A7,B105,B106,B115,B122,B125,B133,B139,B4,B65,B66,B67,B74,B94,B95,C14,C15,C29,C3,C31,C40,C43,C52,C63,C68,C77,D5
lof_cds	Chr7	3505849	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	34	A20,A7,B105,B106,B115,B122,B125,B133,B139,B4,B65,B66,B67,B7,B74,B80,B83,B94,B95,B97,C14,C15,C29,C3,C31,C39,C40,C43,C5,C52,C63,C68,C77,D5
lof_cds	Chr7	3505857	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	C41,C49
typical_cds_rare	Chr7	3505857	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	C41,C49
typical_cds_rare	Chr7	3505905	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	1	A8
lof_cds	Chr7	3505925	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	3	A11,B137,C85
typical_cds_rare	Chr7	3505925	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	3	A11,B137,C85
lof_cds	Chr7	3505926	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	13	A20,A7,B122,B133,B67,B95,C29,C31,C40,C43,C52,C63,C68
lof_cds	Chr7	3505928	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	3	A11,B137,C85
typical_cds_rare	Chr7	3505928	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	3	A11,B137,C85
lof_cds	Chr7	3505930	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	13	A20,A7,B122,B133,B95,C14,C29,C31,C40,C43,C52,C63,C68
lof_cds	Chr7	3505957	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	5	A20,B133,C31,C40,C68
typical_cds_rare	Chr7	3505957	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	5	A20,B133,C31,C40,C68
lof_cds	Chr7	3505962	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	A11,B137,B31,C50
typical_cds_rare	Chr7	3505962	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	A11,B137,B31,C50
lof_cds	Chr7	3505965	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	5	A11,B137,B31,B65,C50
typical_cds_rare	Chr7	3505965	T	TC	INDEL	1bp_insertion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	5	A11,B137,B31,B65,C50
typical_cds_rare	Chr7	3505978	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	A11,B137,B31,C50
typical_cds_rare	Chr7	3505984	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	A11,B137,B31,C50
typical_cds_rare	Chr7	3505985	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	3	B133,B25,C31
typical_cds_rare	Chr7	3505988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	5	A11,B137,B31,C50,C81
typical_cds_rare	Chr7	3506035	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	3	A20,B106,B25
typical_cds_rare	Chr7	3506109	TCG	*	INDEL	2bp_deletion	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	2	B139,B25
typical_cds_rare	Chr7	3506110	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	5	A16,B28,B59,B75,C74
typical_cds_rare	Chr7	3506118	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991691	SmilChr07G000500	130991691	rna-XM_057916047.1	4	A16,B59,B75,C74