source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	3527637	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	10	A8,B18,B23,B53,B62,B75,B97,C54,C82,D4
lof_cds	Chr7	3527717	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	84	A11,A16,A4,A5,A9,B1,B102,B107,B108,B11,B110,B111,B112,B118,B121,B126,B134,B136,B14,B17,B2,B20,B22,B3,B33,B35,B38,B46,B50,B55,B65,B72,B74,B76,B77,B79,B82,B83,B85,B89,B90,B91,B95,C20,C21,C23,C29,C30,C33,C34,C35,C37,C38,C39,C4,C42,C44,C45,C46,C47,C51,C56,C57,C60,C66,C67,C68,C69,C7,C73,C74,C77,C78,C8,C83,C84,C85,C86,C87,D1,D10,D11,D6,D9
lof_cds	Chr7	3527723	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	82	A11,A16,A4,A5,A9,B1,B102,B107,B108,B11,B110,B111,B112,B118,B121,B126,B134,B136,B14,B17,B2,B20,B22,B3,B35,B38,B46,B50,B55,B72,B74,B76,B77,B79,B82,B83,B85,B89,B90,B91,B95,C20,C21,C23,C29,C30,C33,C34,C35,C37,C38,C39,C4,C42,C44,C45,C46,C47,C51,C56,C57,C60,C66,C67,C68,C69,C7,C73,C74,C77,C78,C8,C83,C84,C85,C86,C87,D1,D10,D11,D6,D9
lof_cds	Chr7	3527726	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	81	A11,A16,A4,A5,A9,B1,B102,B107,B108,B11,B110,B111,B112,B118,B121,B126,B134,B136,B14,B17,B2,B20,B22,B3,B35,B38,B46,B50,B55,B72,B74,B77,B79,B82,B83,B85,B89,B90,B91,B95,C20,C21,C23,C29,C30,C33,C34,C35,C37,C38,C39,C4,C42,C44,C45,C46,C47,C51,C56,C57,C60,C66,C67,C68,C69,C7,C73,C74,C77,C78,C8,C83,C84,C85,C86,C87,D1,D10,D11,D6,D9
lof_cds	Chr7	3527729	A	ATT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	4	B33,C47,C5,C74
typical_cds_rare	Chr7	3527729	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	4	B33,C47,C5,C74
lof_cds	Chr7	3527735	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	154	A1,A11,A16,A19,A2,A20,A21,A22,A24,A25,A3,A4,A5,A7,A9,B1,B102,B105,B106,B107,B108,B11,B110,B111,B112,B113,B114,B117,B118,B121,B122,B126,B127,B130,B132,B133,B134,B136,B139,B14,B140,B15,B16,B17,B18,B20,B22,B25,B26,B3,B30,B31,B33,B35,B36,B38,B4,B42,B44,B45,B46,B47,B48,B5,B50,B55,B61,B64,B65,B66,B67,B70,B71,B72,B73,B74,B77,B79,B82,B83,B85,B86,B89,B90,B91,B95,B96,B98,C10,C13,C14,C20,C21,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C33,C34,C35,C36,C37,C38,C39,C4,C42,C44,C45,C46,C47,C5,C51,C52,C55,C56,C57,C58,C60,C61,C66,C67,C68,C69,C7,C70,C71,C73,C74,C76,C78,C79,C8,C81,C83,C84,C85,C86,C87,C9,D1,D10,D11,D3,D5,D6,D7,D8,D9
lof_cds	Chr7	3527747	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	73	A1,A19,A2,A20,A21,A22,A24,A25,A3,A7,B105,B106,B113,B114,B117,B122,B127,B130,B132,B133,B139,B140,B16,B25,B26,B30,B31,B33,B36,B4,B44,B45,B47,B5,B55,B61,B64,B65,B66,B67,B70,B71,B73,B86,B96,B98,C10,C13,C14,C24,C25,C26,C28,C3,C31,C36,C5,C52,C55,C58,C61,C69,C70,C71,C76,C79,C81,C9,D1,D3,D5,D7,D8
lof_cds	Chr7	3527782	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	135	A1,A11,A19,A2,A20,A21,A24,A25,A3,A4,A5,B1,B102,B106,B107,B108,B11,B110,B111,B112,B113,B114,B117,B118,B122,B123,B126,B127,B130,B133,B134,B136,B139,B14,B140,B16,B17,B20,B25,B26,B3,B30,B31,B33,B35,B36,B38,B4,B42,B44,B45,B46,B47,B5,B50,B55,B61,B64,B65,B66,B67,B71,B72,B73,B74,B77,B79,B82,B83,B85,B86,B89,B90,B95,B96,B98,C10,C13,C14,C16,C22,C23,C24,C25,C26,C28,C29,C3,C31,C33,C34,C35,C36,C37,C38,C39,C4,C42,C44,C45,C46,C47,C5,C51,C52,C55,C58,C59,C60,C61,C66,C67,C68,C69,C7,C70,C71,C73,C74,C76,C78,C79,C8,C81,C83,C84,C85,C87,C9,D11,D3,D5,D6,D7,D9
typical_cds_rare	Chr7	3527806	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	4	A3,B30,B34,C3
typical_cds_rare	Chr7	3527833	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	3	C52,C69,D3
typical_cds_rare	Chr7	3527883	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	4	B103,B17,B61,B65
lof_cds	Chr7	3527893	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	8	B114,B120,B66,C26,C61,C63,C79,D3
lof_cds	Chr7	3527907	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	9	A11,A4,A6,B1,B134,B85,C38,C44,C51
lof_cds	Chr7	3527913	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	8	A11,A6,B134,B85,C38,C44,C51,C69
lof_cds	Chr7	3527965	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	19	A3,A4,A5,B111,B121,B29,B34,B36,B37,B39,B49,B69,B72,B77,C25,C30,C33,C41,C79
lof_cds	Chr7	3527974	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	17	A3,A4,A5,B111,B121,B29,B34,B36,B37,B39,B49,B72,C25,C30,C33,C41,C79
lof_cds	Chr7	3527997	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	5	B114,B86,C46,C69,D7
typical_cds_rare	Chr7	3527997	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	5	B114,B86,C46,C69,D7
lof_cds	Chr7	3528135	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	13	A15,A24,A25,B103,B133,B18,B61,B67,C32,C40,C42,C57,C70
lof_cds	Chr7	3528138	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	13	A15,A24,A25,B103,B133,B18,B61,B67,C32,C40,C42,C57,C70
lof_cds	Chr7	3528142	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	13	A15,A24,A25,B103,B133,B18,B61,B67,C32,C40,C42,C57,C70
lof_cds	Chr7	3528283	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	3	B24,B33,B53
typical_cds_rare	Chr7	3528283	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	3	B24,B33,B53
lof_cds	Chr7	3528301	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	173	A10,A11,A13,A14,A15,A16,A18,A20,A21,A22,A24,A25,A3,A4,A6,A7,B1,B10,B100,B103,B105,B106,B107,B108,B111,B112,B114,B115,B12,B120,B121,B122,B123,B124,B125,B126,B129,B13,B130,B131,B132,B133,B134,B135,B137,B139,B14,B140,B15,B16,B17,B18,B20,B22,B25,B26,B29,B3,B30,B31,B34,B35,B36,B38,B39,B4,B44,B45,B46,B47,B48,B5,B50,B51,B55,B57,B59,B61,B63,B64,B65,B66,B67,B68,B69,B70,B71,B72,B73,B74,B76,B78,B82,B83,B84,B85,B86,B87,B88,B9,B90,B91,B92,B93,B94,B95,B97,B99,C13,C14,C15,C16,C17,C2,C20,C21,C22,C23,C24,C25,C27,C28,C29,C3,C30,C31,C32,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C45,C46,C5,C50,C51,C52,C55,C56,C57,C58,C59,C61,C62,C63,C64,C66,C68,C70,C71,C73,C76,C77,C78,C81,C83,C86,C9,D1,D10,D2,D4,D5,D7,D8,D9
typical_cds_rare	Chr7	3528400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	5	A20,A3,B30,B34,B36
typical_cds_rare	Chr7	3528471	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991695	SmilChr07G000504	130991695	rna-XM_057916052.1	1	C39