source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	3721660	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	C47
lof_cds	Chr7	3721671	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	D10
typical_cds_rare	Chr7	3721671	TA	T	INDEL	1bp_deletion	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	D10
lof_cds	Chr7	3721679	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	D10
typical_cds_rare	Chr7	3721679	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	D10
lof_cds	Chr7	3721710	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	6	B25,B71,B91,C42,C83,D8
lof_cds	Chr7	3721731	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	7	B124,B26,B36,B93,C25,C53,D11
lof_cds	Chr7	3721734	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	11	B100,B123,B139,B42,B43,B48,B57,B85,B97,C32,C38
typical_cds_rare	Chr7	3721742	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	3	B25,C42,C83
lof_cds	Chr7	3721771	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	2	C42,C83
typical_cds_rare	Chr7	3721771	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	2	C42,C83
lof_cds	Chr7	3721785	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	9	A10,A23,B126,B25,B59,B71,C16,C62,D8
lof_cds	Chr7	3721789	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	22	A13,A14,A19,A4,A8,B103,B106,B120,B16,B33,B41,B61,B69,B86,B95,C10,C15,C29,C48,C80,D2,D4
lof_cds	Chr7	3721810	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	5	A4,B33,B95,C48,C80
typical_cds_rare	Chr7	3721810	A	AT	INDEL	1bp_insertion	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	5	A4,B33,B95,C48,C80
typical_cds_rare	Chr7	3721822	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	2	B57,B91
lof_cds	Chr7	3721831	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	20	A15,A24,B107,B108,B114,B134,B22,B88,C11,C17,C28,C32,C36,C61,C68,C69,C70,C71,C77,D2
typical_cds_rare	Chr7	3721994	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	3	B42,B85,C45
typical_cds_rare	Chr7	3722021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	4	B139,B42,B85,D10
lof_cds	Chr7	3722310	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	3	B33,B95,C48
typical_cds_rare	Chr7	3722310	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	3	B33,B95,C48
lof_cds	Chr7	3722328	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	5	B56,C11,C69,C84,D7
typical_cds_rare	Chr7	3722328	CGG	C	INDEL	2bp_deletion	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	5	B56,C11,C69,C84,D7
lof_cds	Chr7	3722351	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	37	A13,A14,A19,A25,A3,B1,B100,B106,B128,B16,B20,B25,B3,B48,B55,B63,B66,B67,B69,B74,B76,B78,B83,B87,B91,C10,C15,C23,C29,C42,C43,C52,C56,C83,D2,D8,D9
typical_cds_rare	Chr7	3722367	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	3	B78,B87,C52
lof_cds	Chr7	3722397	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	11	A10,A23,B126,B25,B46,B59,B71,B81,C16,C62,D8
lof_cds	Chr7	3722438	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	7	B10,B107,B121,B90,B92,B93,C21
lof_cds	Chr7	3722445	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	12	A21,A25,B101,B118,B25,B71,B91,C39,C42,C82,C83,D8
typical_cds_rare	Chr7	3722463	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	4	A21,A8,B101,C45
typical_cds_rare	Chr7	3722506	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	5	A21,B101,B118,C39,C82
typical_cds_rare	Chr7	3722550	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	C72
typical_cds_rare	Chr7	3722572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	5	B120,B30,B31,C52,C75
typical_cds_rare	Chr7	3722577	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	2	B91,C83
typical_cds_rare	Chr7	3722586	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	B14
typical_cds_rare	Chr7	3722609	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	2	C32,C68
typical_cds_rare	Chr7	3722745	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	5	B120,B31,C52,C75,D3
typical_cds_rare	Chr7	3722807	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	3	B119,C32,C68
lof_cds	Chr7	3722856	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	2	C32,C68
typical_cds_rare	Chr7	3722856	GAA	G	INDEL	2bp_deletion	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	2	C32,C68
typical_cds_rare	Chr7	3722873	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	A8
typical_cds_rare	Chr7	3722931	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	3	A11,B12,B55
lof_cds	Chr7	3722954	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	3	C33,C46,C5
typical_cds_rare	Chr7	3722954	G	GAT	INDEL	2bp_insertion	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	3	C33,C46,C5
lof_cds	Chr7	3722984	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	89	A1,A15,A16,A18,A21,A24,A25,A5,A7,A8,B10,B101,B105,B107,B108,B112,B113,B114,B117,B118,B121,B126,B13,B134,B14,B140,B18,B2,B22,B23,B25,B26,B32,B34,B35,B4,B42,B45,B46,B53,B68,B69,B70,B71,B72,B75,B83,B85,B88,B90,B91,B93,B97,C11,C17,C18,C21,C24,C28,C3,C32,C34,C36,C38,C39,C42,C45,C5,C51,C54,C58,C59,C61,C62,C64,C65,C66,C68,C69,C70,C71,C77,C78,C82,C83,D2,D4,D6,D8
lof_cds	Chr7	3722986	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	88	A1,A15,A16,A18,A21,A24,A25,A5,A7,A8,B10,B101,B105,B107,B108,B112,B113,B114,B117,B118,B121,B126,B13,B134,B14,B140,B18,B2,B22,B23,B25,B26,B32,B34,B35,B4,B42,B45,B46,B53,B68,B69,B70,B71,B72,B75,B83,B85,B88,B90,B91,B93,B97,C11,C17,C18,C21,C24,C28,C3,C32,C34,C36,C38,C39,C42,C45,C5,C51,C54,C58,C59,C61,C62,C64,C65,C66,C68,C70,C71,C77,C78,C82,C83,D2,D4,D6,D8
lof_cds	Chr7	3722989	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	88	A1,A15,A16,A18,A21,A24,A25,A5,A7,A8,B10,B101,B105,B107,B108,B112,B113,B114,B117,B118,B121,B126,B13,B134,B14,B140,B18,B2,B22,B23,B25,B26,B32,B34,B35,B4,B42,B45,B46,B53,B68,B69,B70,B71,B72,B75,B83,B85,B88,B90,B91,B93,B97,C11,C17,C18,C21,C24,C28,C3,C32,C34,C36,C38,C39,C42,C45,C5,C51,C54,C58,C59,C61,C62,C64,C65,C66,C68,C70,C71,C77,C78,C82,C83,D2,D4,D6,D8
typical_cds_rare	Chr7	3723009	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	C83
lof_cds	Chr7	3723076	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	B33
typical_cds_rare	Chr7	3723076	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130991722	SmilChr07G000538	130991722	rna-XM_057916085.1	1	B33