source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	4016013	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	8	B29,B33,B63,B64,B89,C66,C75,C76
lof_cds	Chr7	4016015	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	8	B29,B33,B63,B64,B89,C66,C75,C76
typical_cds_rare	Chr7	4016039	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	A8
typical_cds_rare	Chr7	4016040	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C1
lof_cds	Chr7	4016066	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	C2,C84
typical_cds_rare	Chr7	4016066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	C2,C84
typical_cds_rare	Chr7	4016119	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	B14
lof_cds	Chr7	4016157	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C71
typical_cds_rare	Chr7	4016157	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C71
typical_cds_rare	Chr7	4016161	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B101,B32,B65,D6
typical_cds_rare	Chr7	4016163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	5	A2,A23,A5,B106,C58
typical_cds_rare	Chr7	4016179	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	B44
typical_cds_rare	Chr7	4016185	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B12,B55,B93
typical_cds_rare	Chr7	4016233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	5	A13,C36,C48,C80,D7
lof_cds	Chr7	4016245	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B19,B72,C21,C5
typical_cds_rare	Chr7	4016245	C	CGG	INDEL	2bp_insertion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B19,B72,C21,C5
lof_cds	Chr7	4016248	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B19,B72,C21,C5
typical_cds_rare	Chr7	4016248	G	GTC	INDEL	2bp_insertion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B19,B72,C21,C5
typical_cds_rare	Chr7	4016251	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B19,B72,C21,C5
lof_cds	Chr7	4016282	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	78	A22,A3,A4,A9,B1,B100,B102,B106,B107,B110,B124,B125,B129,B13,B132,B137,B140,B16,B18,B22,B23,B26,B27,B3,B31,B36,B38,B39,B44,B47,B5,B50,B55,B57,B63,B68,B69,B74,B75,B76,B82,B83,B84,B89,B9,B97,C1,C11,C17,C23,C24,C25,C28,C29,C31,C33,C35,C38,C40,C41,C43,C44,C46,C53,C54,C56,C6,C60,C65,C69,C74,C81,C82,C9,D1,D2,D4,D9
typical_cds_rare	Chr7	4016284	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B38,B39,C83
typical_cds_rare	Chr7	4016348	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B118,B18,B77,C55
lof_cds	Chr7	4016357	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	46	A10,A2,A23,A5,A7,B104,B106,B112,B12,B121,B122,B126,B134,B139,B16,B29,B38,B5,B51,B55,B59,B7,B78,B80,B81,B90,B99,C14,C16,C20,C21,C26,C39,C45,C52,C73,C75,C78,C8,C82,C83,C87,D10,D3,D6,D8
typical_cds_rare	Chr7	4016368	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	B90,C21
lof_cds	Chr7	4016380	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B16,C35,C46
typical_cds_rare	Chr7	4016380	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B16,C35,C46
typical_cds_rare	Chr7	4016399	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	B140
typical_cds_rare	Chr7	4016447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	C33,C46
typical_cds_rare	Chr7	4016456	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	B53
typical_cds_rare	Chr7	4016475	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B90,B92,B99,C21
typical_cds_rare	Chr7	4016488	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B15,B34,C13,C58
lof_cds	Chr7	4016508	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	36	A10,A19,A23,B106,B115,B117,B119,B127,B133,B134,B135,B140,B15,B17,B64,B66,B67,B72,B78,B93,B95,C13,C19,C20,C26,C37,C47,C55,C57,C59,C75,C77,C78,C85,D10,D5
lof_cds	Chr7	4016529	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	11	B117,B133,B64,B78,C13,C43,C57,C63,C75,D10,D5
typical_cds_rare	Chr7	4016540	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B115,B119,B135
typical_cds_rare	Chr7	4016600	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	B16,B24,C35,C46
lof_cds	Chr7	4016630	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	5	A25,B10,B65,B77,D1
typical_cds_rare	Chr7	4016630	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	5	A25,B10,B65,B77,D1
typical_cds_rare	Chr7	4016657	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	B105,C86
typical_cds_rare	Chr7	4016662	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	5	B90,B92,B99,C14,C21
lof_cds	Chr7	4016663	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B62,B64,C19
typical_cds_rare	Chr7	4016663	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B62,B64,C19
lof_cds	Chr7	4016664	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	5	B90,B92,B99,C14,C21
typical_cds_rare	Chr7	4016664	C	CG	INDEL	1bp_insertion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	5	B90,B92,B99,C14,C21
lof_cds	Chr7	4016667	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	42	A14,A21,A7,A8,B100,B104,B106,B109,B11,B117,B12,B131,B133,B26,B29,B32,B33,B41,B43,B51,B52,B53,B61,B72,B74,B83,B91,B96,B97,C10,C13,C24,C38,C48,C5,C54,C55,C59,C78,D2,D5,D6
lof_cds	Chr7	4016745	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	B91
typical_cds_rare	Chr7	4016745	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	B91
lof_cds	Chr7	4016779	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	30	A22,A3,B1,B124,B129,B13,B132,B26,B3,B36,B47,B55,B63,B76,B82,B83,C1,C23,C24,C25,C28,C31,C41,C43,C54,C56,C81,C9,D1,D9
lof_cds	Chr7	4016787	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	A8,B113,B131,C10
typical_cds_rare	Chr7	4016787	TAC	T	INDEL	2bp_deletion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	A8,B113,B131,C10
lof_cds	Chr7	4016791	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	A8,B113,B131,C10
typical_cds_rare	Chr7	4016791	T	TGC	INDEL	2bp_insertion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	A8,B113,B131,C10
lof_cds	Chr7	4016801	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	16	A10,A18,A2,A23,A5,B126,B25,B51,B59,B81,C16,C33,C58,C62,C86,D8
typical_cds_rare	Chr7	4016804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C86
typical_cds_rare	Chr7	4016828	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C1
typical_cds_rare	Chr7	4016870	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	C2,C84
lof_cds	Chr7	4016885	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	18	A10,A18,A2,A23,B122,B126,B25,B51,B59,B81,B88,C16,C20,C27,C33,C58,C62,D8
typical_cds_rare	Chr7	4016958	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	B75,C21
lof_cds	Chr7	4016988	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	A8,B130,B18,C63
typical_cds_rare	Chr7	4016988	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	4	A8,B130,B18,C63
lof_cds	Chr7	4017006	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	B48,D11
typical_cds_rare	Chr7	4017006	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	B48,D11
lof_cds	Chr7	4017009	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	B12
typical_cds_rare	Chr7	4017009	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	B12
typical_cds_rare	Chr7	4017010	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B104,B48,D11
typical_cds_rare	Chr7	4017011	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B53,C21,C34
lof_cds	Chr7	4017026	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	16	B102,B110,B137,B27,B38,B5,B57,B89,C1,C17,C33,C46,C53,C60,C82,D4
typical_cds_rare	Chr7	4017057	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	B122
typical_cds_rare	Chr7	4017087	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C84
typical_cds_rare	Chr7	4017094	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	C50,C62,D2
typical_cds_rare	Chr7	4017103	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	B140,C55
typical_cds_rare	Chr7	4017116	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C71
typical_cds_rare	Chr7	4017146	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	3	B132,B3,B47
typical_cds_rare	Chr7	4017151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	2	A9,C17
lof_cds	Chr7	4017190	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C7
typical_cds_rare	Chr7	4017190	T	TA	INDEL	1bp_insertion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C7
lof_cds	Chr7	4017195	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C7
typical_cds_rare	Chr7	4017195	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	1	C7
lof_cds	Chr7	4017201	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	6	A1,B10,B107,B33,B7,B71
lof_cds	Chr7	4017209	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	25	A11,A14,A21,A23,B103,B108,B112,B114,B124,B130,B131,B22,B28,B60,B64,B79,C15,C30,C36,C43,C50,C6,C68,C87,D7
lof_cds	Chr7	4017220	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC130993079	SmilChr07G000588	130993079	rna-XM_057917801.1	70	A18,A22,A25,A9,B1,B110,B119,B122,B123,B124,B125,B128,B16,B19,B20,B24,B25,B27,B32,B36,B4,B41,B42,B43,B44,B50,B52,B54,B56,B57,B58,B60,B62,B70,B71,B73,B78,B81,B9,B91,B92,B96,B97,B99,C11,C17,C19,C22,C23,C33,C37,C40,C42,C43,C44,C46,C49,C54,C60,C64,C65,C7,C8,C80,C84,D2,D4,D6,D8,D9