source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	28881181	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B108,B119,B122,B81
typical_cds_rare	Chr7	28881181	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B108,B119,B122,B81
typical_cds_rare	Chr7	28881220	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B42,B43
typical_cds_rare	Chr7	28881222	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	5	B72,C65,C83,D3,D6
typical_cds_rare	Chr7	28881227	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B103,B137,B26
typical_cds_rare	Chr7	28881249	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B35,C32,C68
typical_cds_rare	Chr7	28881250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C35
typical_cds_rare	Chr7	28881304	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B125,B136,B139,C73
typical_cds_rare	Chr7	28881324	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B108,B119,B122,B81
typical_cds_rare	Chr7	28881450	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	B132
typical_cds_rare	Chr7	28881476	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	5	B72,C46,C65,D3,D6
lof_cds	Chr7	28881527	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	151	A1,A11,A14,A16,A18,A20,A23,A24,A3,A5,A6,A7,A8,B10,B100,B101,B103,B104,B105,B109,B111,B113,B114,B117,B118,B120,B123,B125,B127,B128,B129,B130,B133,B134,B135,B137,B138,B139,B140,B15,B2,B21,B22,B25,B27,B28,B31,B35,B37,B4,B40,B41,B42,B43,B45,B47,B48,B49,B5,B50,B53,B54,B55,B57,B58,B59,B6,B60,B61,B63,B64,B65,B66,B68,B71,B74,B75,B76,B77,B78,B79,B8,B80,B82,B83,B85,B87,B88,B89,B90,B92,B93,B97,B98,C10,C12,C13,C15,C16,C19,C20,C21,C23,C26,C27,C28,C3,C31,C32,C33,C34,C35,C36,C37,C4,C41,C42,C43,C45,C46,C48,C5,C51,C52,C59,C6,C62,C67,C68,C7,C70,C71,C75,C76,C77,C78,C79,C80,C81,C82,C83,C84,C85,C86,C9,D1,D11,D4,D5,D8,D9
typical_cds_rare	Chr7	28881538	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	B76
lof_cds	Chr7	28881565	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	121	A11,A13,A14,A15,A18,A20,A21,A22,A24,A25,A4,A6,B1,B10,B101,B102,B105,B106,B107,B110,B111,B113,B118,B119,B12,B120,B121,B122,B123,B124,B126,B13,B132,B134,B136,B138,B139,B14,B16,B17,B18,B19,B20,B24,B26,B27,B29,B32,B34,B38,B39,B44,B45,B47,B48,B51,B52,B54,B55,B56,B59,B61,B62,B65,B67,B69,B72,B75,B80,B81,B82,B84,B86,B87,B9,B91,B94,B96,B99,C1,C10,C11,C12,C16,C20,C22,C23,C24,C25,C26,C27,C31,C32,C33,C34,C37,C42,C49,C5,C50,C52,C55,C59,C60,C61,C67,C68,C69,C7,C72,C74,C77,C8,C80,C82,C85,C86,C9,D3,D5,D7
typical_cds_rare	Chr7	28881568	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	A23,B129,B86,C17
lof_cds	Chr7	28881591	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	23	A19,A2,A21,B112,B136,B20,B29,B33,B36,B67,B70,B95,C18,C25,C29,C40,C53,C54,C55,C56,C57,C58,D6
typical_cds_rare	Chr7	28881623	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C44
typical_cds_rare	Chr7	28881640	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	C43,C46
typical_cds_rare	Chr7	28881680	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B42,B43
lof_cds	Chr7	28881735	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	119	A10,A11,A13,A14,A15,A18,A20,A21,A22,A24,A25,A3,A4,A6,B1,B10,B101,B105,B106,B107,B110,B111,B114,B115,B118,B12,B120,B121,B123,B124,B125,B126,B129,B13,B132,B133,B138,B14,B16,B19,B20,B24,B26,B29,B3,B32,B33,B34,B38,B39,B42,B43,B47,B48,B51,B52,B54,B56,B57,B62,B65,B67,B69,B75,B80,B84,B86,B87,B9,B91,B94,B96,B99,C10,C11,C12,C13,C16,C17,C20,C22,C23,C24,C25,C26,C28,C3,C31,C33,C34,C35,C37,C39,C49,C5,C50,C52,C55,C59,C60,C61,C64,C66,C67,C69,C7,C72,C73,C74,C76,C77,C8,C80,C82,C85,C86,D4,D5,D7
lof_cds	Chr7	28881743	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	B26
typical_cds_rare	Chr7	28881743	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	B26
typical_cds_rare	Chr7	28881807	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B103,B137,C38
typical_cds_rare	Chr7	28881817	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C38
lof_cds	Chr7	28881851	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B42,B43
typical_cds_rare	Chr7	28881851	C	CA	INDEL	1bp_insertion	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B42,B43
typical_cds_rare	Chr7	28881859	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B103,B137,B26
typical_cds_rare	Chr7	28881878	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C46
lof_cds	Chr7	28881888	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B34,C38
typical_cds_rare	Chr7	28881888	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B34,C38
typical_cds_rare	Chr7	28881895	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B108,B119,B122,B81
typical_cds_rare	Chr7	28881896	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B108,B119,B122,B81
typical_cds_rare	Chr7	28881900	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B108,B119,B122,B81
typical_cds_rare	Chr7	28881905	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B72,C65,D3,D6
typical_cds_rare	Chr7	28881915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	C39,C51
typical_cds_rare	Chr7	28881948	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B42,B43
typical_cds_rare	Chr7	28881982	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B34,C38,D10
typical_cds_rare	Chr7	28881984	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	D11
typical_cds_rare	Chr7	28881990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	B42
lof_cds	Chr7	28882057	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	39	A13,A15,A7,B1,B106,B115,B121,B126,B127,B128,B24,B25,B30,B38,B39,B4,B46,B5,B6,B62,B63,B66,B71,B76,B90,B92,B98,C11,C17,C21,C28,C45,C49,C61,C69,C78,C79,C8,D10
typical_cds_rare	Chr7	28882117	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B103,B137,B26
typical_cds_rare	Chr7	28882135	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	A23,B129,B86,C17
typical_cds_rare	Chr7	28882149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	A4,C11,C67,C69
typical_cds_rare	Chr7	28882154	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C73
typical_cds_rare	Chr7	28882155	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B136,D6
typical_cds_rare	Chr7	28882177	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B136,B139
typical_cds_rare	Chr7	28882211	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C57
typical_cds_rare	Chr7	28882243	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	B125
typical_cds_rare	Chr7	28882277	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B42,B43
typical_cds_rare	Chr7	28882284	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	D11
typical_cds_rare	Chr7	28882287	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	D10
typical_cds_rare	Chr7	28882298	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B34,C38,C65
typical_cds_rare	Chr7	28882307	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B103,B137,B26,B72
typical_cds_rare	Chr7	28882400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	C27,C46
typical_cds_rare	Chr7	28882494	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B103,B137,B26
lof_cds	Chr7	28882500	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	24	A2,A3,A9,B13,B140,B22,B35,B36,B44,B50,B85,B89,C1,C14,C19,C2,C4,C44,C6,C62,C83,D1,D11,D8
typical_cds_rare	Chr7	28882589	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C65
lof_cds	Chr7	28882627	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	11	A10,B110,B131,B23,B3,B33,B40,C39,C64,C66,D2
typical_cds_rare	Chr7	28882670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C35
typical_cds_rare	Chr7	28882672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	D10
lof_cds	Chr7	28882689	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C14
typical_cds_rare	Chr7	28882689	T	TG	INDEL	1bp_insertion	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C14
typical_cds_rare	Chr7	28882728	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C46
typical_cds_rare	Chr7	28882749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B131,C2
typical_cds_rare	Chr7	28882767	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B34,C38,C65
typical_cds_rare	Chr7	28882802	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B103,B137,B26
typical_cds_rare	Chr7	28882809	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	C44,C71
typical_cds_rare	Chr7	28882827	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C46
typical_cds_rare	Chr7	28882829	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	C46
typical_cds_rare	Chr7	28882836	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B136,B139
typical_cds_rare	Chr7	28882837	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B72,C65,D6
typical_cds_rare	Chr7	28882860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B42,B43
typical_cds_rare	Chr7	28882864	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	B72
typical_cds_rare	Chr7	28882930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	1	D10
typical_cds_rare	Chr7	28882945	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	3	B103,B137,B26
typical_cds_rare	Chr7	28882981	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B108,B119,B122,B81
typical_cds_rare	Chr7	28883009	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	4	B108,B119,B122,B81
typical_cds_rare	Chr7	28883021	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	2	B131,C2
lof_cds	Chr7	28883026	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130994047	SmilChr07G002867	130994047	rna-XM_057919084.1	16	A16,A23,B103,B128,B130,B137,B15,B26,B27,B35,B85,C32,C68,C71,C84,D10