source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	28895721	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	256	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr7	28895730	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	4	B105,B15,C12,C84
typical_cds_rare	Chr7	28895831	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	1	C39
lof_cds	Chr7	28895836	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	16	A1,B111,B128,B129,B131,B140,B49,B7,B79,C19,C36,C42,C46,C5,C61,C71
lof_cds	Chr7	28896070	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	1	D10
typical_cds_rare	Chr7	28896070	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	1	D10
lof_cds	Chr7	28896105	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	3	B82,C28,C31
typical_cds_rare	Chr7	28896105	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	3	B82,C28,C31
typical_cds_rare	Chr7	28896258	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	2	B34,C38
typical_cds_rare	Chr7	28896264	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	2	B136,B139
lof_cds	Chr7	28896296	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	254	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,B1,B10,B100,B101,B102,B103,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr7	28896661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	2	C16,C9
typical_cds_rare	Chr7	28896668	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	1	B135
lof_cds	Chr7	28896790	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	33	A5,B106,B16,B2,B25,B29,B36,B44,B49,B56,B58,B60,B69,B71,B74,B8,B88,B95,B96,C17,C18,C19,C2,C38,C4,C41,C43,C58,C6,C60,C62,C72,C78
lof_cds	Chr7	28896982	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	1	B5
typical_cds_rare	Chr7	28896982	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	1	B5
lof_cds	Chr7	28897315	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	19	A19,B12,B125,B21,B26,B32,B36,B55,B64,B72,B89,B90,B91,B97,C49,C50,C55,C60,C72
lof_cds	Chr7	28897322	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	17	A2,A24,A3,A6,B118,B25,B61,B65,B94,C11,C32,C51,C66,C68,C69,C80,C9
typical_cds_rare	Chr7	28897365	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	2	B131,C2
lof_cds	Chr7	28897386	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	4	A5,B8,C41,C43
typical_cds_rare	Chr7	28897386	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	4	A5,B8,C41,C43
lof_cds	Chr7	28897407	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1	259	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr7	28897415	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1	4	B123,B19,B52,B86
typical_cds_rare	Chr7	28897415	C	CA	INDEL	1bp_insertion	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1	4	B123,B19,B52,B86
typical_cds_rare	Chr7	28897549	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	1	C15
lof_cds	Chr7	28897585	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	205	A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B107,B108,B109,B11,B110,B112,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B13,B130,B132,B133,B134,B135,B136,B137,B138,B139,B14,B15,B16,B17,B19,B2,B20,B21,B22,B24,B27,B28,B3,B31,B32,B33,B34,B35,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B5,B50,B51,B52,B53,B54,B56,B57,B58,B59,B6,B60,B61,B62,B63,B65,B66,B67,B68,B69,B70,B73,B75,B76,B77,B78,B80,B81,B82,B84,B85,B86,B87,B89,B9,B93,B94,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C2,C20,C22,C23,C24,C25,C26,C28,C3,C31,C32,C33,C34,C35,C36,C38,C39,C40,C41,C44,C45,C46,C47,C48,C49,C5,C50,C52,C54,C55,C57,C59,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr7	28897736	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	15	B106,B111,B128,B131,B140,B49,B7,B79,C19,C36,C42,C46,C61,C71,D11
lof_cds	Chr7	28897791	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	5	B128,B129,B131,C71,D11
typical_cds_rare	Chr7	28897791	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	5	B128,B129,B131,C71,D11
typical_cds_rare	Chr7	28897822	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	1	B21
typical_cds_rare	Chr7	28898198	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	3	B73,C81,D7
typical_cds_rare	Chr7	28898233	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	3	B74,C71,C82
typical_cds_rare	Chr7	28898455	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	4	B75,C11,C20,C9
typical_cds_rare	Chr7	28898478	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	4	B108,B119,B122,B81
lof_cds	Chr7	28898696	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	6	B38,B39,B7,B95,C72,C76
lof_cds	Chr7	28898725	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	5	B138,B17,B63,C18,C82
typical_cds_rare	Chr7	28898725	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	5	B138,B17,B63,C18,C82
typical_cds_rare	Chr7	28898911	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995861	SmilChr07G002869	130995861	rna-XM_057921310.1,rna-XM_057921311.1,rna-XM_057921312.1,rna-XM_057921313.1,rna-XM_057921314.1,rna-XM_057921315.1	3	C14,C83,D11