source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	39359895	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	1	D8
typical_cds_rare	Chr7	39359895	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	1	D8
lof_cds	Chr7	39359898	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B64,D8
typical_cds_rare	Chr7	39359898	CT	C	INDEL	1bp_deletion	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B64,D8
typical_cds_rare	Chr7	39359905	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	1	D8
typical_cds_rare	Chr7	39359944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B108,C50
typical_cds_rare	Chr7	39359962	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	1	B87
typical_cds_rare	Chr7	39359977	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B126,B33
lof_cds	Chr7	39359983	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	34	A15,A4,A6,B102,B104,B11,B112,B117,B123,B126,B13,B138,B20,B21,B28,B33,B36,B4,B42,B47,B50,B68,B81,B87,B9,B97,C1,C20,C22,C36,C44,C61,C78,D6
typical_cds_rare	Chr7	39359984	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	B100,B44,C84,D8
typical_cds_rare	Chr7	39359990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	5	A14,A25,B137,B3,B65
typical_cds_rare	Chr7	39359994	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B65,C1
typical_cds_rare	Chr7	39359997	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B37,B78
typical_cds_rare	Chr7	39359999	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	3	A18,B140,D4
typical_cds_rare	Chr7	39360002	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	3	B109,B58,C63
lof_cds	Chr7	39360004	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B64,B90
typical_cds_rare	Chr7	39360004	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B64,B90
lof_cds	Chr7	39360012	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	37	A14,A15,A3,A4,A6,B102,B104,B11,B112,B117,B123,B126,B13,B138,B20,B21,B28,B33,B4,B42,B47,B50,B75,B8,B81,B9,B97,C1,C20,C22,C36,C44,C61,C65,C78,C82,D6
typical_cds_rare	Chr7	39360020	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	B100,C84,D11,D8
typical_cds_rare	Chr7	39360022	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	5	B108,B64,B90,C50,C85
typical_cds_rare	Chr7	39360023	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B64,B90
lof_cds	Chr7	39360043	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	6	B19,B37,B58,B74,C29,C76
lof_cds	Chr7	39360058	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	8	A3,B112,B132,B51,C21,C65,C69,C81
typical_cds_rare	Chr7	39360089	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	1	C17
typical_cds_rare	Chr7	39360091	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	3	B11,D11,D6
lof_cds	Chr7	39360103	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	80	A11,A21,A3,A5,A7,A9,B1,B101,B103,B106,B108,B110,B111,B112,B113,B122,B126,B127,B129,B131,B132,B135,B138,B20,B21,B22,B23,B27,B30,B35,B36,B37,B42,B44,B63,B64,B72,B75,B76,B80,B81,B82,B85,B89,B9,B90,B91,B92,B93,B95,B97,B98,C1,C16,C17,C19,C22,C29,C30,C33,C35,C37,C4,C42,C44,C46,C48,C49,C54,C56,C57,C6,C61,C65,C69,C78,C83,D10,D7,D8
lof_cds	Chr7	39360109	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	5	B125,B59,C34,C59,D1
typical_cds_rare	Chr7	39360109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	5	B125,B59,C34,C59,D1
lof_cds	Chr7	39360119	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	38	A14,A3,A5,B1,B106,B108,B109,B112,B122,B125,B126,B135,B138,B20,B21,B26,B42,B44,B63,B72,B75,B76,B81,B82,B93,C16,C19,C22,C42,C49,C56,C61,C65,C69,C78,C8,C83,D10
lof_cds	Chr7	39360133	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	24	A2,A21,A3,B11,B117,B127,B129,B13,B131,B20,B28,B39,B6,B63,B83,B9,C21,C44,C56,C63,C67,C7,C74,D11
typical_cds_rare	Chr7	39360138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	B132,C20,C4,C69
lof_cds	Chr7	39360145	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	7	A10,B103,B30,C16,C45,C5,C76
lof_cds	Chr7	39360151	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	30	A11,A18,A19,A2,A25,B125,B21,B26,B32,B38,B44,B51,B72,B76,B80,B89,B98,C26,C29,C40,C46,C48,C49,C50,C55,C60,C72,C77,C81,C85
lof_cds	Chr7	39360178	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	7	B64,C11,C17,C20,C4,C69,C9
lof_cds	Chr7	39360181	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	10	A2,A22,A25,B38,B44,B51,C26,C29,C81,D10
typical_cds_rare	Chr7	39360186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	1	B2
typical_cds_rare	Chr7	39360192	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	5	A6,B32,B78,C38,C9
lof_cds	Chr7	39360199	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	10	B32,B64,B78,C11,C17,C20,C38,C4,C69,C9
lof_cds	Chr7	39360204	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	3	B78,C38,C44
typical_cds_rare	Chr7	39360204	GGA	G	INDEL	2bp_deletion	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	3	B78,C38,C44
lof_cds	Chr7	39360214	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	A6,B108,B117,C2
typical_cds_rare	Chr7	39360214	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	A6,B108,B117,C2
typical_cds_rare	Chr7	39360215	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	C81,C83
lof_cds	Chr7	39360217	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	1	B37
typical_cds_rare	Chr7	39360217	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	1	B37
typical_cds_rare	Chr7	39360222	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	1	D10
typical_cds_rare	Chr7	39360230	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	B126,B23,C85,D6
lof_cds	Chr7	39360232	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	9	B69,B78,C38,C44,C56,C68,C69,C73,D11
lof_cds	Chr7	39360235	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	11	B132,B5,B64,C11,C15,C17,C20,C4,C69,C82,C9
lof_cds	Chr7	39360242	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B117,C2
typical_cds_rare	Chr7	39360242	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B117,C2
lof_cds	Chr7	39360262	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	A14,B130,B62,D11
typical_cds_rare	Chr7	39360262	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	A14,B130,B62,D11
lof_cds	Chr7	39360268	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	3	C51,C77,C86
typical_cds_rare	Chr7	39360268	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	3	C51,C77,C86
lof_cds	Chr7	39360271	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B1,B7
typical_cds_rare	Chr7	39360271	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B1,B7
typical_cds_rare	Chr7	39360278	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	B105,B18,B37,D8
typical_cds_rare	Chr7	39360284	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	B78,C38,C44,C68
lof_cds	Chr7	39360286	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	179	A1,A10,A11,A13,A14,A15,A19,A2,A20,A21,A22,A23,A25,A4,A6,A7,A8,B1,B10,B101,B102,B104,B105,B106,B107,B109,B11,B111,B112,B113,B115,B117,B118,B12,B120,B122,B123,B124,B125,B126,B129,B13,B130,B131,B132,B133,B135,B137,B138,B139,B140,B17,B18,B22,B23,B24,B25,B26,B28,B3,B31,B32,B33,B34,B35,B37,B41,B42,B43,B44,B45,B46,B47,B48,B50,B52,B53,B54,B56,B58,B59,B6,B61,B62,B63,B64,B65,B66,B67,B7,B70,B71,B72,B73,B75,B76,B77,B78,B8,B80,B81,B82,B83,B85,B86,B89,B9,B90,B91,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C14,C16,C18,C19,C21,C22,C23,C24,C26,C27,C29,C32,C33,C35,C36,C39,C4,C42,C43,C44,C46,C47,C48,C49,C51,C52,C53,C54,C56,C57,C6,C61,C62,C63,C64,C66,C67,C68,C69,C70,C71,C73,C74,C78,C79,C8,C81,C82,C83,C85,C87,C9,D1,D10,D11,D5,D6,D7,D8,D9
lof_cds	Chr7	39360288	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	174	A1,A10,A11,A13,A14,A15,A19,A2,A20,A21,A22,A23,A25,A4,A6,A7,A8,B1,B10,B101,B102,B104,B105,B106,B107,B108,B109,B111,B112,B113,B115,B117,B118,B12,B120,B122,B123,B124,B125,B126,B129,B13,B130,B131,B132,B133,B135,B137,B138,B139,B140,B17,B18,B22,B23,B24,B25,B26,B28,B3,B31,B32,B33,B34,B35,B37,B41,B42,B43,B44,B45,B46,B47,B48,B50,B52,B53,B54,B56,B58,B59,B6,B61,B62,B63,B65,B66,B67,B7,B70,B71,B72,B73,B75,B76,B77,B78,B8,B80,B81,B82,B83,B84,B85,B86,B89,B9,B90,B91,B93,B94,B95,B97,B98,C1,C10,C12,C14,C16,C18,C19,C21,C22,C23,C24,C26,C27,C29,C32,C33,C36,C39,C4,C42,C43,C44,C46,C47,C48,C49,C51,C52,C53,C54,C56,C57,C6,C61,C62,C63,C64,C66,C67,C68,C7,C70,C71,C73,C74,C78,C79,C8,C81,C83,C85,C87,D1,D10,D2,D5,D6,D7,D8,D9
typical_cds_rare	Chr7	39360300	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	B95,B98
typical_cds_rare	Chr7	39360302	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	C14,C82,D1,D8
lof_cds	Chr7	39360313	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	207	A1,A10,A11,A13,A14,A15,A19,A2,A20,A21,A22,A23,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B115,B117,B118,B12,B120,B121,B122,B123,B124,B125,B126,B129,B13,B130,B131,B132,B135,B137,B139,B140,B15,B17,B18,B21,B22,B23,B24,B25,B26,B28,B29,B3,B31,B32,B33,B34,B35,B36,B37,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B50,B52,B53,B54,B56,B58,B59,B6,B61,B62,B63,B64,B65,B66,B67,B68,B7,B70,B71,B72,B73,B75,B76,B77,B78,B8,B80,B81,B82,B83,B84,B85,B86,B89,B9,B90,B91,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C14,C17,C18,C19,C2,C20,C21,C22,C23,C24,C26,C27,C28,C29,C30,C32,C33,C35,C36,C39,C4,C40,C43,C44,C45,C46,C47,C48,C49,C5,C51,C52,C53,C54,C55,C56,C57,C59,C6,C61,C62,C63,C64,C66,C67,C68,C69,C7,C70,C71,C73,C74,C76,C78,C79,C8,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D5,D6,D7,D8,D9
typical_cds_rare	Chr7	39360328	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	A14,C26,C77,C83
typical_cds_rare	Chr7	39360337	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	2	C12,D6
typical_cds_rare	Chr7	39360344	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994207	SmilChr07G003486	130994207	rna-XM_057919241.1	4	A16,B130,C28,C70