source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	39458740	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B28
typical_cds_rare	Chr7	39458766	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	B129,B90,B92,C21,D10
typical_cds_rare	Chr7	39458768	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	A11,B107,C4,C71
lof_cds	Chr7	39458773	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	34	A7,B100,B102,B111,B121,B126,B127,B133,B136,B2,B23,B37,B55,B60,B66,B70,B81,B91,B98,C11,C16,C17,C21,C27,C36,C5,C52,C56,C65,C67,C69,C79,D3,D8
typical_cds_rare	Chr7	39458812	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	D10
lof_cds	Chr7	39458820	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	77	A1,A19,A2,A20,A22,A24,A3,A4,A5,A9,B1,B104,B106,B109,B110,B114,B120,B122,B129,B130,B132,B134,B135,B137,B139,B17,B19,B26,B28,B3,B44,B48,B54,B58,B59,B61,B63,B65,B69,B73,B74,B75,B76,B77,B78,B84,B89,B95,C1,C17,C18,C19,C22,C23,C26,C28,C30,C31,C35,C36,C37,C4,C41,C45,C46,C50,C53,C54,C58,C67,C73,C74,C77,C82,C85,D11,D5
lof_cds	Chr7	39458841	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	40	A7,A9,B10,B100,B102,B114,B121,B126,B127,B133,B136,B2,B23,B37,B55,B60,B66,B70,B74,B81,B91,B98,C11,C16,C17,C20,C21,C27,C3,C36,C5,C52,C56,C65,C67,C69,C72,C79,D3,D8
typical_cds_rare	Chr7	39458871	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	3	B13,B140,C25
lof_cds	Chr7	39458913	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	A15,B112,B33,C81
typical_cds_rare	Chr7	39458913	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	A15,B112,B33,C81
lof_cds	Chr7	39458914	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	B129,B90,C21,D10
typical_cds_rare	Chr7	39458914	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	B129,B90,C21,D10
lof_cds	Chr7	39458915	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	71	A14,A15,A5,A6,A7,B100,B102,B103,B106,B107,B111,B112,B119,B12,B122,B13,B133,B134,B137,B139,B15,B16,B17,B18,B29,B31,B32,B33,B34,B38,B39,B40,B47,B5,B50,B52,B56,B57,B6,B62,B64,B68,B86,B94,B96,C1,C14,C15,C22,C24,C25,C33,C34,C38,C44,C46,C49,C51,C55,C56,C57,C6,C63,C64,C66,C7,C73,C76,C77,D1,D2
typical_cds_rare	Chr7	39458952	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	B37,B54
typical_cds_rare	Chr7	39458957	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B137
typical_cds_rare	Chr7	39458981	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	C20,C77
typical_cds_rare	Chr7	39458982	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B45
typical_cds_rare	Chr7	39458989	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	B22,B35,C16,C62,D4
lof_cds	Chr7	39458991	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	9	A10,B106,B24,B74,B84,C37,C71,C8,C81
lof_cds	Chr7	39458999	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	88	A1,A13,A15,A18,A2,A25,A7,A8,B100,B101,B103,B107,B110,B111,B114,B121,B122,B124,B128,B131,B137,B139,B19,B20,B21,B23,B26,B29,B31,B32,B33,B35,B37,B38,B46,B53,B61,B62,B65,B67,B69,B70,B71,B76,B77,B78,B81,B82,B84,B89,B9,B93,C1,C11,C12,C14,C18,C20,C25,C26,C27,C36,C43,C44,C47,C48,C49,C5,C50,C51,C52,C58,C60,C61,C62,C63,C65,C69,C70,C71,C75,C77,C80,C83,C84,C87,D3,D6
lof_cds	Chr7	39459002	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	85	A1,A13,A14,A15,A18,A2,A25,A7,A8,B100,B103,B107,B110,B111,B122,B124,B128,B131,B137,B139,B19,B20,B21,B23,B26,B29,B31,B32,B33,B35,B37,B38,B46,B53,B61,B62,B65,B69,B70,B71,B76,B77,B78,B81,B82,B84,B89,B9,B93,C1,C11,C12,C14,C18,C20,C25,C26,C31,C36,C43,C44,C47,C48,C49,C5,C50,C51,C52,C58,C60,C61,C62,C63,C65,C69,C70,C71,C75,C77,C80,C83,C84,C87,D3,D6
typical_cds_rare	Chr7	39459039	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	A20,C15
typical_cds_rare	Chr7	39459042	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	3	B101,B108,B132
lof_cds	Chr7	39459046	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	46	A1,A13,A21,B10,B100,B101,B108,B111,B114,B121,B124,B127,B132,B133,B2,B20,B37,B4,B49,B55,B57,B66,B70,B74,B75,B79,B98,B99,C11,C15,C17,C18,C20,C3,C36,C48,C56,C57,C6,C65,C67,C69,C76,C8,D4,D8
typical_cds_rare	Chr7	39459063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	A13,B24,B74,C82,D6
typical_cds_rare	Chr7	39459105	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	3	B90,C21,D10
typical_cds_rare	Chr7	39459107	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	B101,B108
typical_cds_rare	Chr7	39459109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B46
typical_cds_rare	Chr7	39459140	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	3	B113,B122,B41
typical_cds_rare	Chr7	39459471	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	B52,C9
typical_cds_rare	Chr7	39459481	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	A8,B34,B53,C12
typical_cds_rare	Chr7	39459519	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	B10,B114,B2,C3
typical_cds_rare	Chr7	39459521	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	3	B68,B93,C82
typical_cds_rare	Chr7	39459573	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	B120,B18,B48,C24,C27
typical_cds_rare	Chr7	39459603	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	A10,A19,C71,C74,C8
lof_cds	Chr7	39459651	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	B113,B62,B83,C10,C59
typical_cds_rare	Chr7	39459651	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	B113,B62,B83,C10,C59
lof_cds	Chr7	39459654	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	B10,B90
typical_cds_rare	Chr7	39459654	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	B10,B90
typical_cds_rare	Chr7	39459655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	C19,C54
lof_cds	Chr7	39459711	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	A1,B129,C21,D10
typical_cds_rare	Chr7	39459711	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	A1,B129,C21,D10
typical_cds_rare	Chr7	39459719	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	B125,B59,C34,C59,D1
typical_cds_rare	Chr7	39459738	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	B105,B108,B72,C5,C9
typical_cds_rare	Chr7	39459755	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B63
typical_cds_rare	Chr7	39459768	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	B68,C82
typical_cds_rare	Chr7	39459787	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	D10
typical_cds_rare	Chr7	39459845	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B7
typical_cds_rare	Chr7	39459919	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	B109,B25
typical_cds_rare	Chr7	39459930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B109
typical_cds_rare	Chr7	39459931	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B109
typical_cds_rare	Chr7	39459965	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	3	B135,C27,C54
typical_cds_rare	Chr7	39459966	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B108
typical_cds_rare	Chr7	39459985	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	3	B51,B69,D4
typical_cds_rare	Chr7	39459994	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	5	A13,B25,B42,B88,C41
typical_cds_rare	Chr7	39460043	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	D7
typical_cds_rare	Chr7	39460064	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	C50
lof_cds	Chr7	39460094	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	8	A19,B102,B118,B139,B41,C71,C81,D11
typical_cds_rare	Chr7	39460101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	B104
typical_cds_rare	Chr7	39460126	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	B118,B139,C81,D4
typical_cds_rare	Chr7	39460150	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	1	D11
typical_cds_rare	Chr7	39460197	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	3	B129,B90,C21
lof_cds	Chr7	39460217	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	55	A1,A20,A3,A4,A9,B1,B109,B110,B114,B120,B122,B123,B129,B132,B137,B139,B19,B26,B3,B44,B54,B58,B59,B6,B61,B63,B69,B73,B74,B78,B84,B89,C17,C18,C19,C22,C26,C28,C30,C31,C35,C36,C41,C44,C45,C46,C50,C53,C54,C67,C74,C77,C82,C85,D5
lof_cds	Chr7	39460246	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	B114,B17,B73,C30
typical_cds_rare	Chr7	39460246	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	B114,B17,B73,C30
typical_cds_rare	Chr7	39460267	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	2	C74,C81
typical_cds_rare	Chr7	39460300	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994208	SmilChr07G003489	130994208	rna-XM_057919242.1	4	B129,B90,C21,D10