source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	44946193	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B45
typical_cds_rare	Chr7	44946210	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B129
lof_cds	Chr7	44946262	G	GTT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	C16,C58,C64
typical_cds_rare	Chr7	44946262	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	C16,C58,C64
lof_cds	Chr7	44946269	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	28	A13,A6,B100,B121,B123,B124,B127,B136,B17,B30,B45,B52,B64,B66,B76,C35,C37,C38,C4,C42,C48,C55,C56,C67,C77,C87,D4,D6
lof_cds	Chr7	44946356	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	17	A16,A19,A9,B112,B119,B126,B22,B33,B76,B98,C31,C35,C39,C40,C44,C48,C83
lof_cds	Chr7	44946454	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	4	A16,A19,B83,C56
typical_cds_rare	Chr7	44946454	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	4	A16,A19,B83,C56
typical_cds_rare	Chr7	44946471	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	A16,B83,C56
lof_cds	Chr7	44946516	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	10	A16,A19,A3,B28,B31,B83,C3,C56,C63,C70
lof_cds	Chr7	44946526	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	15	A9,B126,B13,B140,B22,B50,B76,B89,C25,C31,C40,C46,C6,C61,D2
lof_cds	Chr7	44946529	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	15	A9,B126,B13,B22,B50,B76,B89,B98,C25,C31,C40,C46,C6,C61,D2
lof_cds	Chr7	44946682	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B6
typical_cds_rare	Chr7	44946682	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B6
typical_cds_rare	Chr7	44946701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B6
typical_cds_rare	Chr7	44946788	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C35
typical_cds_rare	Chr7	44946801	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C35
typical_cds_rare	Chr7	44946814	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44946819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44946833	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44946838	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44946847	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C35
typical_cds_rare	Chr7	44946860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44946869	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
lof_cds	Chr7	44946876	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	36	A13,A4,A7,B102,B104,B136,B16,B18,B32,B43,B54,B61,B65,B69,B80,B92,C10,C11,C17,C29,C33,C34,C37,C42,C50,C54,C56,C58,C64,C67,C74,C80,C87,D4,D6,D9
lof_cds	Chr7	44946880	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	35	A13,A4,A7,B102,B104,B136,B16,B18,B32,B43,B54,B61,B65,B69,B80,B92,C10,C11,C17,C29,C33,C34,C37,C42,C50,C54,C56,C58,C64,C67,C74,C80,C87,D6,D9
lof_cds	Chr7	44946882	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	35	A13,A4,A7,B102,B104,B136,B16,B18,B32,B43,B54,B61,B65,B69,B80,B92,C10,C11,C17,C29,C33,C34,C37,C42,C50,C54,C56,C58,C64,C67,C74,C80,C87,D6,D9
lof_cds	Chr7	44946896	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B32,C74
typical_cds_rare	Chr7	44946896	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B32,C74
typical_cds_rare	Chr7	44946903	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
lof_cds	Chr7	44946925	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44946925	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
lof_cds	Chr7	44946930	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44946930	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44946955	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44947071	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
lof_cds	Chr7	44947087	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	28	A11,A20,A9,B112,B119,B126,B13,B140,B22,B33,B50,B80,B89,B98,C1,C25,C31,C35,C39,C40,C44,C46,C48,C6,C61,C83,D2,D8
lof_cds	Chr7	44947089	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	28	A11,A20,A9,B112,B119,B126,B13,B140,B22,B33,B50,B80,B89,B98,C1,C25,C31,C35,C39,C40,C44,C46,C48,C6,C61,C83,D2,D8
lof_cds	Chr7	44947108	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44947108	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
lof_cds	Chr7	44947162	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44947162	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
lof_cds	Chr7	44947175	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C22
typical_cds_rare	Chr7	44947175	T	TGG	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C22
lof_cds	Chr7	44947178	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C22
typical_cds_rare	Chr7	44947178	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C22
lof_cds	Chr7	44947184	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	13	A19,A3,B28,B6,B63,B83,C3,C31,C44,C56,C63,C67,C70
typical_cds_rare	Chr7	44947196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
lof_cds	Chr7	44947343	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	B33,C31,C40
lof_cds	Chr7	44947348	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,C40
typical_cds_rare	Chr7	44947348	C	CTA	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,C40
lof_cds	Chr7	44947354	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C31
typical_cds_rare	Chr7	44947354	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C31
typical_cds_rare	Chr7	44947359	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	C31
lof_cds	Chr7	44947361	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,C40
typical_cds_rare	Chr7	44947361	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,C40
typical_cds_rare	Chr7	44947364	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	B33,B89,C40
lof_cds	Chr7	44947370	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,B89
typical_cds_rare	Chr7	44947370	G	GCT	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,B89
lof_cds	Chr7	44947378	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,B89
typical_cds_rare	Chr7	44947378	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,B89
lof_cds	Chr7	44947380	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,B89
typical_cds_rare	Chr7	44947380	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,B89
lof_cds	Chr7	44947406	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,C31
typical_cds_rare	Chr7	44947406	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,C31
typical_cds_rare	Chr7	44947408	TAG	*	INDEL	2bp_deletion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B33,C31
lof_cds	Chr7	44947411	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	A20,B33,C31
typical_cds_rare	Chr7	44947411	A	ACG	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	A20,B33,C31
typical_cds_rare	Chr7	44947435	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
lof_cds	Chr7	44947437	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	24	A15,A23,B117,B126,B140,B17,B19,B29,B39,B41,B51,B74,B75,B77,B86,B87,B9,C22,C28,C29,C30,C32,C6,D3
lof_cds	Chr7	44947445	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	24	A15,A23,B117,B126,B140,B17,B19,B29,B39,B41,B51,B74,B75,B77,B86,B87,B9,C15,C22,C28,C29,C30,C32,D3
typical_cds_rare	Chr7	44947452	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44947595	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B63
typical_cds_rare	Chr7	44947612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	5	A15,B119,B126,C40,C6
typical_cds_rare	Chr7	44947616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	5	A15,B119,B126,C40,C6
typical_cds_rare	Chr7	44947625	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44947626	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	4	B22,B80,B89,C35
typical_cds_rare	Chr7	44947815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B104
typical_cds_rare	Chr7	44948008	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	B12,B140,B55
typical_cds_rare	Chr7	44948164	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948175	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948191	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948372	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	4	B21,C26,C57,D1
typical_cds_rare	Chr7	44948489	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948491	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	A20,C54
typical_cds_rare	Chr7	44948515	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948577	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	B72,C27,C63
lof_cds	Chr7	44948609	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948609	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
lof_cds	Chr7	44948612	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948612	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B33
typical_cds_rare	Chr7	44948650	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	B119,B31,C44
typical_cds_rare	Chr7	44948653	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	B119,B31,C44
typical_cds_rare	Chr7	44948708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	4	A3,B113,B119,C31
typical_cds_rare	Chr7	44948714	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	C3,C70
typical_cds_rare	Chr7	44948763	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	5	A21,B20,B72,C27,C63
typical_cds_rare	Chr7	44948765	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B82
typical_cds_rare	Chr7	44948829	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	A23
typical_cds_rare	Chr7	44948849	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	B89,C6
typical_cds_rare	Chr7	44948988	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	A2,B20
typical_cds_rare	Chr7	44949059	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B30
typical_cds_rare	Chr7	44949099	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B30
typical_cds_rare	Chr7	44949100	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	1	B30
typical_cds_rare	Chr7	44949101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	2	C35,C40
typical_cds_rare	Chr7	44949184	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	4	B127,B84,C49,C79
typical_cds_rare	Chr7	44949282	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994557	SmilChr07G003716	130994557	rna-XM_057919601.1	3	B47,C39,C58