source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	46818713	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	49	A18,A5,B106,B109,B111,B113,B118,B127,B13,B138,B140,B15,B18,B27,B32,B41,B5,B50,B55,B57,B59,B67,B68,B76,B77,B79,B84,B87,B89,B90,B92,C13,C21,C29,C30,C35,C40,C41,C49,C50,C53,C60,C64,C66,C72,C78,C79,C82,C83
lof_cds	Chr7	46818723	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B18,B88,C18
typical_cds_rare	Chr7	46818723	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B18,B88,C18
typical_cds_rare	Chr7	46818732	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B133,D7
typical_cds_rare	Chr7	46818763	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B37,C69
typical_cds_rare	Chr7	46818766	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	A22,B136,C9
lof_cds	Chr7	46818768	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	19	B1,B118,B120,B130,B18,B27,B29,B36,B41,B43,B48,B57,B61,B63,B74,C28,C44,C59,C71
lof_cds	Chr7	46818777	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	7	A23,B10,B132,B62,B82,B85,C80
lof_cds	Chr7	46818791	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	8	A24,B10,B104,B125,B64,C1,C45,C59
typical_cds_rare	Chr7	46818792	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B30,B80,C46
lof_cds	Chr7	46818795	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	8	A24,B10,B104,B125,B64,C1,C45,C59
lof_cds	Chr7	46818801	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	7	A22,B110,B47,C24,C3,C70,D3
lof_cds	Chr7	46818803	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	190	A1,A10,A11,A13,A14,A15,A16,A18,A19,A20,A21,A25,A3,A4,A6,A8,A9,B1,B100,B101,B102,B105,B106,B107,B108,B111,B112,B113,B115,B117,B118,B119,B120,B124,B126,B127,B128,B129,B13,B130,B133,B134,B135,B137,B139,B14,B16,B17,B18,B19,B2,B20,B21,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B38,B39,B40,B42,B43,B44,B45,B46,B48,B49,B5,B50,B51,B52,B53,B54,B56,B58,B59,B60,B61,B62,B63,B64,B66,B69,B7,B71,B76,B77,B8,B81,B83,B85,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,C10,C11,C13,C14,C15,C17,C19,C2,C20,C22,C23,C24,C25,C26,C27,C28,C29,C30,C31,C32,C33,C34,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C47,C5,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C74,C75,C76,C77,C78,C79,C8,C82,C85,C87,D1,D10,D11,D2,D5,D6,D8,D9
typical_cds_rare	Chr7	46818809	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	A7,B42,B43
typical_cds_rare	Chr7	46818810	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	B50
lof_cds	Chr7	46818828	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B50,B88,C39
typical_cds_rare	Chr7	46818828	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B50,B88,C39
lof_cds	Chr7	46818838	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	4	B134,B34,C38,C50
typical_cds_rare	Chr7	46818838	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	4	B134,B34,C38,C50
lof_cds	Chr7	46818843	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	8	B126,B132,B18,B50,B55,B9,C44,C62
lof_cds	Chr7	46818844	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	14	A1,B105,B114,B129,B134,B29,B70,B78,C15,C31,C49,C55,C61,D9
typical_cds_rare	Chr7	46818854	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	B62
lof_cds	Chr7	46818863	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	17	A4,B107,B114,B133,B14,B3,B31,B45,B58,B73,B77,B91,B95,C21,C64,C75,D1
typical_cds_rare	Chr7	46818865	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B120,B29,C51
typical_cds_rare	Chr7	46818880	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	5	A16,B16,B37,B38,C49
typical_cds_rare	Chr7	46818898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	D1
typical_cds_rare	Chr7	46818900	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	5	A8,B107,B114,B91,B95
typical_cds_rare	Chr7	46818904	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	4	A24,B110,B66,C1
typical_cds_rare	Chr7	46818910	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	A24
typical_cds_rare	Chr7	46818919	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B50,B66
typical_cds_rare	Chr7	46818921	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B140,B87
lof_cds	Chr7	46818922	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	46	A1,A14,A18,A19,A22,A3,A9,B101,B106,B107,B117,B124,B13,B130,B131,B16,B20,B21,B3,B33,B42,B43,B47,B49,B50,B51,B55,B63,B75,B9,B91,C12,C17,C2,C25,C39,C40,C43,C50,C53,C57,C62,C76,C80,D2,D8
lof_cds	Chr7	46819064	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	10	B106,B20,B30,B33,B40,B63,C19,C40,C57,C76
lof_cds	Chr7	46819107	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	18	A14,A9,B106,B117,B20,B21,B3,B30,B33,B40,B51,B63,B91,C1,C19,C40,C57,C76
typical_cds_rare	Chr7	46819112	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B114,B75,C6
typical_cds_rare	Chr7	46819132	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	C37
typical_cds_rare	Chr7	46819139	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	4	B127,B38,B39,D2
typical_cds_rare	Chr7	46819141	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	C70
lof_cds	Chr7	46819164	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	59	A11,A14,A16,A20,A8,B102,B112,B119,B12,B121,B129,B130,B134,B140,B2,B27,B29,B3,B34,B35,B36,B38,B39,B50,B53,B59,B61,B62,B71,B77,B86,B98,C10,C12,C13,C19,C24,C27,C3,C30,C37,C48,C5,C51,C56,C60,C62,C64,C66,C71,C77,C81,C82,C86,C87,D11,D4,D7,D8
lof_cds	Chr7	46819171	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	C25
typical_cds_rare	Chr7	46819171	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	C25
typical_cds_rare	Chr7	46819173	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B65,C70
typical_cds_rare	Chr7	46819176	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	B50
lof_cds	Chr7	46819204	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	11	B100,B114,B57,B62,B80,B88,B95,C27,C39,C55,C6
lof_cds	Chr7	46819215	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	10	B126,B18,B42,B43,B55,B78,B9,C44,C62,C79
typical_cds_rare	Chr7	46819226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	B37
typical_cds_rare	Chr7	46819230	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B65,C84
lof_cds	Chr7	46819250	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	C32,C68,D8
typical_cds_rare	Chr7	46819250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	C32,C68,D8
typical_cds_rare	Chr7	46819258	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B15,B89,C72
lof_cds	Chr7	46819306	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	9	A9,B1,B140,B45,C30,C4,C73,C79,C84
lof_cds	Chr7	46819336	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B5,B6,B8
typical_cds_rare	Chr7	46819336	G	GT	INDEL	1bp_insertion	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B5,B6,B8
typical_cds_rare	Chr7	46819340	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B26,C37
lof_cds	Chr7	46819347	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	7	A11,B28,B31,B71,B93,C62,C8
typical_cds_rare	Chr7	46819356	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B36,B69
typical_cds_rare	Chr7	46819366	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	B106,B13,C82
typical_cds_rare	Chr7	46819371	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B26,C37
typical_cds_rare	Chr7	46819393	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	C51
lof_cds	Chr7	46819413	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	72	A1,A14,A18,A3,A7,A8,B1,B102,B105,B112,B115,B12,B120,B126,B131,B132,B137,B139,B14,B17,B18,B22,B23,B3,B34,B35,B36,B37,B39,B40,B42,B43,B45,B48,B52,B55,B63,B65,B69,B73,B79,B80,B82,B83,B89,B90,B92,B94,C1,C12,C16,C17,C20,C28,C33,C34,C35,C4,C44,C45,C47,C59,C60,C62,C66,C67,C7,C72,C79,C81,D3,D4
typical_cds_rare	Chr7	46819427	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B67,C21
lof_cds	Chr7	46819428	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	8	B118,B56,B91,C24,C32,C68,C77,D8
typical_cds_rare	Chr7	46819432	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	B38
typical_cds_rare	Chr7	46819442	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	C70
typical_cds_rare	Chr7	46819445	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	4	B28,B31,B71,C8
lof_cds	Chr7	46819452	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B39,D3
typical_cds_rare	Chr7	46819452	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B39,D3
typical_cds_rare	Chr7	46819454	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	A14,B114,C6
typical_cds_rare	Chr7	46819476	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	3	A9,B20,B63
typical_cds_rare	Chr7	46819478	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B49,B50
typical_cds_rare	Chr7	46819496	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B49,B50
lof_cds	Chr7	46819502	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B49,B50
typical_cds_rare	Chr7	46819502	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B49,B50
typical_cds_rare	Chr7	46819512	GGA	*	INDEL	2bp_deletion	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	5	A19,B124,B16,B6,B88
typical_cds_rare	Chr7	46819536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	4	A18,B140,B67,C78
typical_cds_rare	Chr7	46819540	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	4	B134,B34,C38,C50
lof_cds	Chr7	46819571	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	25	A1,A19,A2,A22,A8,B108,B128,B133,B20,B24,B32,B33,B45,B56,B85,B96,B99,C11,C35,C47,C5,C58,C6,C85,D9
lof_cds	Chr7	46819572	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	76	A11,A14,A16,A3,A9,B103,B110,B112,B12,B121,B122,B123,B124,B130,B134,B137,B14,B16,B2,B21,B29,B35,B36,B47,B49,B50,B55,B60,B63,B65,B66,B67,B69,B71,B72,B75,B76,B78,B8,B83,B88,B92,B94,B98,C13,C15,C16,C21,C25,C27,C31,C32,C33,C34,C37,C39,C43,C48,C49,C50,C51,C54,C55,C57,C60,C62,C69,C71,C74,C76,C78,C82,C86,C87,C9,D7
typical_cds_rare	Chr7	46819590	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	1	B33
typical_cds_rare	Chr7	46819591	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994295	SmilChr07G003801	130994295	rna-XM_057919341.1	2	B49,C21