source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	48283603	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	13	A25,B113,B34,B40,B51,B52,B6,C10,C11,C69,C76,C87,D2
typical_cds_rare	Chr7	48283624	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	A2,B72
lof_cds	Chr7	48283669	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	152	A1,A10,A11,A14,A16,A20,A23,A3,A4,A5,A6,B1,B10,B101,B102,B103,B106,B107,B11,B110,B111,B112,B113,B115,B118,B119,B12,B120,B123,B127,B128,B129,B13,B130,B133,B136,B16,B17,B20,B21,B23,B25,B26,B27,B28,B29,B30,B32,B34,B38,B39,B4,B40,B41,B42,B47,B49,B50,B51,B53,B54,B55,B56,B58,B6,B60,B62,B63,B64,B66,B67,B68,B71,B73,B74,B75,B76,B77,B79,B8,B80,B85,B89,B90,B91,B92,B93,B94,B95,B96,B98,C10,C11,C13,C15,C16,C19,C20,C21,C22,C24,C26,C27,C28,C3,C30,C31,C32,C37,C39,C4,C40,C42,C43,C44,C45,C47,C48,C49,C5,C51,C53,C54,C55,C57,C58,C61,C62,C63,C64,C66,C68,C69,C7,C70,C71,C72,C73,C75,C76,C77,C8,C80,C81,C83,C85,C87,D2,D3,D4,D5,D9
typical_cds_rare	Chr7	48283686	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	5	B122,B123,B134,C53,C77
lof_cds	Chr7	48283689	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	135	A1,A13,A14,A16,A18,A19,A21,A24,A3,A5,A6,A9,B10,B100,B101,B104,B106,B107,B108,B109,B11,B111,B112,B113,B115,B117,B119,B121,B122,B127,B131,B132,B133,B138,B18,B2,B21,B22,B25,B26,B28,B30,B33,B34,B35,B36,B37,B40,B42,B43,B44,B45,B49,B5,B50,B51,B55,B56,B59,B6,B60,B61,B63,B65,B66,B68,B69,B70,B71,B75,B76,B77,B79,B8,B81,B83,B84,B85,B89,B9,B90,B92,B94,B95,B96,B99,C1,C10,C13,C21,C22,C25,C29,C3,C31,C32,C35,C36,C37,C38,C39,C4,C40,C41,C43,C44,C47,C54,C55,C56,C57,C58,C6,C62,C63,C67,C68,C69,C73,C74,C75,C76,C77,C78,C79,C80,C81,C83,C86,C87,D1,D2,D4,D6,D8
lof_cds	Chr7	48283690	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	16	B106,B111,B118,B120,B123,B56,B73,B76,B85,C24,C31,C48,C8,C81,D4,D5
typical_cds_rare	Chr7	48283720	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B103
lof_cds	Chr7	48283724	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	31	A18,A20,A7,B1,B103,B114,B120,B125,B126,B17,B23,B31,B40,B48,B53,B66,B7,B80,B82,C16,C17,C24,C27,C32,C33,C35,C37,C39,C68,C71,D7
typical_cds_rare	Chr7	48283726	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B134,C53
lof_cds	Chr7	48283731	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	5	A20,B133,B50,B77,C76
typical_cds_rare	Chr7	48283731	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	5	A20,B133,B50,B77,C76
typical_cds_rare	Chr7	48283744	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B103
typical_cds_rare	Chr7	48283745	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B103
typical_cds_rare	Chr7	48283757	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	3	B71,C32,C42
lof_cds	Chr7	48283765	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	73	A16,A20,A23,A3,A5,B1,B101,B105,B11,B12,B120,B123,B128,B129,B13,B133,B134,B136,B15,B16,B21,B28,B53,B56,B59,B60,B68,B70,B73,B74,B76,B79,B80,B81,B92,B95,B97,C11,C16,C20,C24,C26,C27,C29,C30,C31,C32,C37,C40,C45,C47,C48,C49,C51,C55,C61,C62,C64,C66,C69,C70,C71,C73,C76,C77,C8,C80,C83,C85,D2,D3,D4,D5
lof_cds	Chr7	48283769	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	13	B1,B120,B53,B59,B60,B95,C16,C20,C26,C27,C49,C55,D3
lof_cds	Chr7	48283779	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	43	A10,A2,A25,A4,B1,B102,B105,B109,B123,B128,B135,B137,B19,B20,B22,B29,B30,B32,B36,B43,B52,B64,B74,B9,B90,B91,B97,C1,C14,C15,C19,C2,C22,C26,C45,C53,C55,C74,C76,C8,C80,C85,D3
lof_cds	Chr7	48283783	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B71,C42
typical_cds_rare	Chr7	48283783	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B71,C42
typical_cds_rare	Chr7	48283786	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	C65
typical_cds_rare	Chr7	48283802	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B38,B40
typical_cds_rare	Chr7	48283814	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	4	B12,B55,B71,C42
typical_cds_rare	Chr7	48283815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B100,C58
typical_cds_rare	Chr7	48283823	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B67
typical_cds_rare	Chr7	48283827	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	5	A3,B115,B70,B81,D5
typical_cds_rare	Chr7	48283839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	3	B110,B83,C55
typical_cds_rare	Chr7	48283844	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	4	B72,C50,C53,C64
typical_cds_rare	Chr7	48283864	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B82,C12
typical_cds_rare	Chr7	48283884	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B40
lof_cds	Chr7	48283889	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	28	A16,A3,A5,B105,B106,B117,B120,B129,B13,B132,B136,B27,B4,B45,B56,B65,B67,B85,C2,C29,C43,C55,C57,C64,C75,C80,D2,D5
lof_cds	Chr7	48283893	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	27	A16,A3,B105,B106,B117,B120,B129,B13,B132,B136,B27,B4,B45,B56,B65,B67,B85,C2,C29,C43,C55,C57,C64,C75,C80,D2,D5
lof_cds	Chr7	48283896	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	26	A16,A3,B105,B106,B117,B120,B129,B13,B132,B136,B27,B4,B56,B65,B67,B85,C2,C29,C43,C55,C57,C64,C75,C80,D2,D5
typical_cds_rare	Chr7	48283926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	C86
typical_cds_rare	Chr7	48283965	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	4	B129,C2,C55,D5
typical_cds_rare	Chr7	48283980	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B37
typical_cds_rare	Chr7	48283987	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B65,C75
typical_cds_rare	Chr7	48284002	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	A21,B101
typical_cds_rare	Chr7	48284019	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	5	B129,B56,B70,C29,D2
typical_cds_rare	Chr7	48284042	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	5	A10,A11,A23,B25,C54
lof_cds	Chr7	48284086	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	D11
typical_cds_rare	Chr7	48284086	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	D11
typical_cds_rare	Chr7	48284090	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B12,B55
typical_cds_rare	Chr7	48284120	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	C53
lof_cds	Chr7	48284121	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B8
typical_cds_rare	Chr7	48284121	GGC	G	INDEL	2bp_deletion	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B8
typical_cds_rare	Chr7	48284122	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B12,B55
typical_cds_rare	Chr7	48284163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B12,B55
lof_cds	Chr7	48284210	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	C6
typical_cds_rare	Chr7	48284210	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	C6
typical_cds_rare	Chr7	48284238	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	A22,C63
typical_cds_rare	Chr7	48284263	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	3	B31,C17,C35
lof_cds	Chr7	48284266	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	65	A1,A13,A14,A16,A18,A19,A24,A3,B104,B109,B11,B118,B119,B122,B127,B131,B132,B26,B28,B30,B33,B34,B36,B45,B55,B56,B59,B6,B63,B66,B70,B76,B77,B83,B84,B85,B90,B92,B96,B99,C13,C21,C22,C29,C3,C35,C38,C4,C44,C47,C48,C56,C57,C58,C6,C63,C67,C73,C74,C77,C80,C81,C83,C87,D4
typical_cds_rare	Chr7	48284268	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B54
lof_cds	Chr7	48284296	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	120	A1,A13,A14,A16,A18,A19,A24,A3,A4,A5,A6,A9,B10,B100,B101,B104,B106,B107,B109,B11,B112,B113,B117,B118,B119,B121,B122,B127,B131,B132,B140,B18,B2,B22,B26,B28,B30,B33,B34,B36,B40,B42,B43,B44,B45,B49,B50,B51,B55,B56,B59,B6,B60,B61,B63,B65,B66,B68,B69,B70,B71,B75,B76,B77,B79,B8,B83,B84,B85,B89,B9,B90,B92,B94,B96,B99,C1,C11,C13,C21,C22,C25,C29,C3,C32,C35,C36,C38,C39,C4,C40,C41,C44,C47,C48,C54,C55,C56,C57,C58,C6,C62,C63,C67,C68,C69,C73,C74,C77,C78,C79,C80,C81,C83,C87,D1,D4,D6,D8,D9
typical_cds_rare	Chr7	48284303	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	3	B121,B54,B56
lof_cds	Chr7	48284317	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	57	A10,A11,A2,A4,B102,B105,B109,B115,B123,B128,B135,B137,B19,B20,B22,B24,B28,B29,B30,B32,B33,B36,B42,B43,B52,B60,B62,B64,B68,B77,B8,B87,B91,B92,B97,B98,C1,C14,C15,C19,C2,C22,C26,C32,C45,C53,C55,C61,C62,C63,C65,C68,C74,C8,C80,C82,C85
typical_cds_rare	Chr7	48284330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	3	C3,C42,C84
typical_cds_rare	Chr7	48284346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	B54
typical_cds_rare	Chr7	48284352	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	4	A22,B15,B54,B96
typical_cds_rare	Chr7	48284359	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	5	B31,B66,B7,C17,C35
typical_cds_rare	Chr7	48284367	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	2	B54,D11
typical_cds_rare	Chr7	48284368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	3	A22,B15,B96
typical_cds_rare	Chr7	48284380	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	4	A23,B59,C34,C36
typical_cds_rare	Chr7	48284385	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	5	B31,B66,B7,C17,C35
typical_cds_rare	Chr7	48284409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	1	C54
typical_cds_rare	Chr7	48284462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994315	SmilChr07G003874	130994315	rna-XM_057919360.1	5	A18,B31,B66,B7,C35