source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	48727630	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	24	A2,B102,B120,B135,B138,B3,B31,B38,B4,B41,B5,B6,B61,C1,C18,C26,C3,C43,C46,C6,C63,C65,C67,C81
lof_cds	Chr7	48727667	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	11	B10,B31,B41,B42,B43,B56,B84,B96,C17,C58,C60
lof_cds	Chr7	48727677	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B23,C13
typical_cds_rare	Chr7	48727677	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B23,C13
lof_cds	Chr7	48727679	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	92	A10,A11,A2,A21,A22,A4,B1,B10,B101,B102,B104,B105,B107,B11,B117,B118,B120,B121,B125,B126,B129,B13,B131,B133,B134,B135,B136,B138,B139,B18,B3,B31,B35,B38,B4,B41,B42,B43,B48,B5,B50,B54,B56,B58,B60,B61,B73,B75,B78,B81,B83,B84,B87,B89,B9,B90,B92,B96,B98,B99,C1,C10,C17,C18,C21,C26,C29,C3,C30,C31,C32,C35,C43,C45,C46,C51,C53,C58,C6,C60,C63,C65,C67,C74,C76,C78,C79,C81,C84,C87,D11,D9
lof_cds	Chr7	48727694	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	43	A10,A11,A21,A4,B1,B10,B101,B104,B105,B11,B129,B13,B131,B134,B136,B139,B18,B31,B35,B41,B42,B43,B56,B61,B73,B78,B83,B84,B9,B96,B98,C17,C29,C31,C32,C45,C46,C51,C58,C60,C63,C76,C78
lof_cds	Chr7	48727698	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	45	A10,A11,A21,A4,B1,B10,B101,B104,B105,B11,B129,B13,B131,B134,B136,B139,B18,B31,B35,B41,B42,B43,B56,B61,B73,B78,B83,B84,B9,B96,B98,C17,C25,C29,C31,C32,C45,C46,C51,C53,C58,C60,C63,C76,C78
lof_cds	Chr7	48727732	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	3	B107,B117,D11
typical_cds_rare	Chr7	48727732	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	3	B107,B117,D11
lof_cds	Chr7	48727733	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	29	A10,A11,A21,A4,B1,B101,B104,B105,B11,B129,B134,B136,B139,B18,B35,B75,B78,B96,B98,C30,C31,C32,C45,C46,C51,C53,C74,C76,C78
typical_cds_rare	Chr7	48727747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	4	B63,B91,D6,D7
typical_cds_rare	Chr7	48727802	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B12,B55
lof_cds	Chr7	48727823	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	79	A1,A10,A14,A19,A25,A5,A6,A7,B103,B105,B108,B109,B115,B118,B126,B127,B133,B135,B136,B14,B140,B15,B2,B21,B22,B23,B24,B25,B36,B38,B39,B40,B49,B51,B52,B53,B54,B55,B56,B59,B61,B64,B66,B71,B74,B76,B77,B8,B80,B96,B97,C1,C10,C14,C17,C19,C23,C25,C27,C28,C29,C33,C40,C46,C5,C51,C52,C63,C65,C67,C72,C73,C80,C82,C85,D1,D10,D3,D6
typical_cds_rare	Chr7	48727828	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B104
typical_cds_rare	Chr7	48727833	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	4	B131,B136,B45,B62
typical_cds_rare	Chr7	48727844	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	5	B118,B23,C10,C43,C74
lof_cds	Chr7	48728013	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	122	A1,A13,A14,A16,A18,A2,A20,A22,A23,A24,A4,A5,B100,B102,B106,B107,B11,B111,B112,B113,B117,B121,B123,B124,B125,B126,B127,B131,B133,B135,B14,B140,B15,B16,B18,B19,B21,B26,B27,B28,B29,B3,B30,B33,B35,B38,B39,B40,B41,B42,B43,B44,B45,B48,B49,B5,B50,B56,B58,B59,B65,B66,B69,B7,B70,B73,B76,B78,B79,B81,B82,B88,B89,B93,B94,B95,B98,C12,C13,C14,C15,C16,C2,C20,C22,C24,C25,C26,C3,C31,C32,C34,C36,C37,C39,C4,C40,C41,C42,C43,C44,C47,C48,C49,C54,C56,C61,C64,C66,C68,C71,C74,C77,C78,C84,C85,C86,C87,D2,D3,D5,D7
typical_cds_rare	Chr7	48728022	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B131,C26
typical_cds_rare	Chr7	48728037	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	5	B13,B61,B73,B83,C63
typical_cds_rare	Chr7	48728039	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B121,C16
lof_cds	Chr7	48728044	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	5	B13,B61,B73,B83,C63
typical_cds_rare	Chr7	48728044	GT	G	INDEL	1bp_deletion	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	5	B13,B61,B73,B83,C63
typical_cds_rare	Chr7	48728049	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B122,B33
typical_cds_rare	Chr7	48728070	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	5	B13,B61,B73,B83,C63
typical_cds_rare	Chr7	48728086	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	3	A2,B40,C34
lof_cds	Chr7	48728090	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	89	A18,A2,A20,A23,A24,A4,A5,B102,B106,B11,B112,B113,B117,B123,B124,B125,B131,B132,B133,B135,B14,B140,B15,B18,B19,B26,B27,B28,B29,B3,B30,B33,B40,B41,B42,B43,B44,B48,B5,B50,B56,B58,B65,B66,B69,B70,B73,B76,B78,B79,B81,B82,B88,B94,B95,C12,C13,C16,C20,C21,C22,C24,C26,C3,C32,C34,C37,C39,C40,C42,C43,C44,C48,C49,C54,C56,C61,C64,C68,C71,C74,C78,C84,C86,C87,D2,D3,D5,D7
typical_cds_rare	Chr7	48728102	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B122
typical_cds_rare	Chr7	48728106	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B4,B58
lof_cds	Chr7	48728113	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B88,D7
typical_cds_rare	Chr7	48728113	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B88,D7
lof_cds	Chr7	48728132	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	115	A11,A13,A14,A16,A18,A20,A24,A3,A4,A5,A9,B100,B106,B107,B11,B111,B112,B113,B117,B121,B123,B124,B125,B126,B127,B131,B132,B133,B135,B14,B140,B15,B16,B18,B19,B26,B27,B28,B29,B3,B33,B35,B38,B39,B41,B42,B43,B44,B45,B48,B5,B50,B56,B58,B65,B66,B68,B69,B70,B73,B76,B78,B79,B81,B82,B88,B89,B93,B94,B95,B98,B99,C12,C13,C14,C15,C16,C2,C20,C21,C22,C25,C26,C3,C31,C32,C34,C35,C36,C37,C39,C40,C42,C43,C44,C47,C48,C49,C54,C60,C61,C64,C66,C68,C74,C77,C78,C79,C84,C86,C87,D2,D3,D5,D7
typical_cds_rare	Chr7	48728137	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	C8
lof_cds	Chr7	48728149	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B102
typical_cds_rare	Chr7	48728149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B102
lof_cds	Chr7	48728165	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	11	A2,A22,B40,B88,C24,C34,C56,C71,C78,C85,D11
typical_cds_rare	Chr7	48728176	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	4	B55,B56,B96,C60
typical_cds_rare	Chr7	48728201	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B66,B8
typical_cds_rare	Chr7	48728205	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	3	A25,B83,C63
typical_cds_rare	Chr7	48728210	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	4	B128,B26,B94,C58
typical_cds_rare	Chr7	48728211	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	3	A25,B83,C63
lof_cds	Chr7	48728241	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B23,C14
typical_cds_rare	Chr7	48728241	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B23,C14
lof_cds	Chr7	48728249	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	14	A1,A23,B105,B21,B30,B45,B74,B85,B86,C17,C47,C84,C9,D9
typical_cds_rare	Chr7	48728267	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	D10
typical_cds_rare	Chr7	48728274	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B102
typical_cds_rare	Chr7	48728291	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B122,C23
typical_cds_rare	Chr7	48728295	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B73
typical_cds_rare	Chr7	48728297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	5	B131,C26,C4,C75,D6
lof_cds	Chr7	48728301	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	18	A16,B102,B16,B5,B50,B52,B57,B62,B69,B84,B93,C30,C41,C55,C60,C70,C73,C79
typical_cds_rare	Chr7	48728392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B102
lof_cds	Chr7	48728416	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	23	A1,A13,A23,A7,B105,B121,B15,B21,B25,B30,B45,B7,B74,B85,B86,B93,C17,C47,C5,C53,C84,C9,D9
lof_cds	Chr7	48728435	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	17	A14,A5,B10,B102,B106,B107,B12,B22,B23,B53,B78,C13,C16,C24,C27,C37,C42
lof_cds	Chr7	48728436	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	128	A1,A11,A13,A14,A16,A18,A2,A20,A22,A23,A24,A3,A4,A5,A6,B100,B102,B11,B111,B112,B113,B117,B121,B123,B124,B125,B126,B127,B132,B133,B135,B14,B140,B15,B16,B18,B19,B21,B26,B27,B28,B29,B3,B30,B33,B35,B38,B39,B40,B41,B42,B43,B44,B45,B48,B5,B50,B51,B56,B58,B59,B65,B66,B68,B69,B70,B73,B75,B76,B78,B79,B81,B82,B88,B89,B93,B95,B98,B99,C12,C13,C14,C15,C16,C2,C20,C21,C22,C24,C26,C3,C31,C32,C34,C35,C36,C37,C39,C4,C40,C41,C42,C43,C44,C47,C48,C49,C54,C56,C60,C61,C62,C64,C67,C68,C71,C74,C77,C78,C79,C84,C85,C86,C87,D2,D3,D5,D7
lof_cds	Chr7	48728448	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B122
typical_cds_rare	Chr7	48728448	GCA	G	INDEL	2bp_deletion	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B122
lof_cds	Chr7	48728462	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	125	A1,A11,A13,A14,A16,A18,A2,A20,A23,A24,A3,A4,A5,A9,B100,B102,B11,B111,B112,B113,B117,B121,B123,B124,B125,B126,B127,B131,B132,B133,B135,B14,B140,B15,B16,B18,B19,B21,B26,B27,B28,B29,B3,B30,B33,B35,B38,B39,B40,B41,B42,B43,B44,B45,B48,B5,B50,B56,B58,B59,B65,B66,B68,B69,B70,B73,B76,B78,B79,B81,B82,B88,B89,B93,B95,B98,C12,C13,C14,C15,C16,C2,C20,C21,C22,C24,C26,C3,C31,C32,C34,C35,C36,C37,C39,C4,C40,C41,C42,C43,C44,C47,C48,C49,C54,C56,C60,C61,C62,C64,C66,C68,C71,C74,C77,C78,C79,C84,C85,C86,C87,D2,D3,D5,D7
lof_cds	Chr7	48728463	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B122,C26
typical_cds_rare	Chr7	48728463	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	2	B122,C26
lof_cds	Chr7	48728478	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	56	A14,A15,A3,A9,B1,B100,B101,B109,B115,B123,B127,B13,B130,B14,B2,B22,B34,B35,B38,B39,B45,B46,B48,B52,B53,B59,B60,B63,B66,B71,B77,B82,B85,B86,B89,B95,B99,C15,C2,C28,C29,C32,C38,C4,C44,C49,C54,C56,C57,C6,C66,C68,C77,C83,D4,D5
typical_cds_rare	Chr7	48728549	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	5	B10,B4,B59,B98,C27
typical_cds_rare	Chr7	48728570	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	C58
lof_cds	Chr7	48728615	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	40	A19,A6,B103,B105,B109,B115,B118,B126,B136,B139,B14,B140,B22,B24,B25,B49,B51,B52,B56,B61,B64,B66,B71,B8,B80,B96,C25,C27,C40,C46,C51,C52,C63,C65,C67,C73,C80,C82,D3,D6
typical_cds_rare	Chr7	48728633	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	3	B49,B79,C36
lof_cds	Chr7	48728650	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B108
typical_cds_rare	Chr7	48728650	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	1	B108
lof_cds	Chr7	48728652	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	3	B57,C65,D11
typical_cds_rare	Chr7	48728652	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130994323	SmilChr07G003891	130994323	rna-XM_057919368.1	3	B57,C65,D11