source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	52459658	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B33
typical_cds_rare	Chr7	52459658	G	GCT	INDEL	2bp_insertion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B33
typical_cds_rare	Chr7	52459765	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B6
typical_cds_rare	Chr7	52459781	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B12,C25
typical_cds_rare	Chr7	52459818	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B33
typical_cds_rare	Chr7	52459859	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B12,C25
lof_cds	Chr7	52459962	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B101,B24,B53
typical_cds_rare	Chr7	52459962	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B101,B24,B53
typical_cds_rare	Chr7	52460109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	4	B109,B125,C48,C61
lof_cds	Chr7	52460277	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	A24,B125
typical_cds_rare	Chr7	52460277	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	A24,B125
lof_cds	Chr7	52460294	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	A24,B125
typical_cds_rare	Chr7	52460294	CCT	C	INDEL	2bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	A24,B125
lof_cds	Chr7	52460300	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	A24,B125,B72
typical_cds_rare	Chr7	52460300	TA	T	INDEL	1bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	A24,B125,B72
lof_cds	Chr7	52460304	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B72
typical_cds_rare	Chr7	52460304	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B72
lof_cds	Chr7	52460381	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	11	A16,B110,B111,B16,B27,B59,C35,C56,C76,C9,D2
typical_cds_rare	Chr7	52460457	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B45,B72
typical_cds_rare	Chr7	52460479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	5	A18,B32,C17,C42,C49
typical_cds_rare	Chr7	52460489	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C32
typical_cds_rare	Chr7	52460493	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	D4
typical_cds_rare	Chr7	52460522	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B53,C38
typical_cds_rare	Chr7	52460550	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	D10
typical_cds_rare	Chr7	52460585	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B53,C38
typical_cds_rare	Chr7	52460616	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B46,C38,C53
typical_cds_rare	Chr7	52460623	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B120,C36,C53
typical_cds_rare	Chr7	52460647	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C23
typical_cds_rare	Chr7	52460720	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C23
typical_cds_rare	Chr7	52460743	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	C32,C68
typical_cds_rare	Chr7	52460749	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B45
typical_cds_rare	Chr7	52460790	AGG	*	INDEL	2bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B8,B96
typical_cds_rare	Chr7	52460841	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B104
typical_cds_rare	Chr7	52460869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	C36,C60
typical_cds_rare	Chr7	52460972	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	5	B133,B22,B59,B62,B89
typical_cds_rare	Chr7	52460985	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B59
typical_cds_rare	Chr7	52461056	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B127,C26
typical_cds_rare	Chr7	52461065	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B134,B68
typical_cds_rare	Chr7	52461069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B120,C36
typical_cds_rare	Chr7	52461099	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	4	B105,B120,B90,D10
typical_cds_rare	Chr7	52461107	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	D10
typical_cds_rare	Chr7	52461109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B84
typical_cds_rare	Chr7	52461112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	5	A9,B89,C1,C17,C41
typical_cds_rare	Chr7	52461137	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B75
typical_cds_rare	Chr7	52461149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B129,B27,C34
lof_cds	Chr7	52461176	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	5	B34,B51,C78,C85,D6
typical_cds_rare	Chr7	52461176	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	5	B34,B51,C78,C85,D6
typical_cds_rare	Chr7	52461202	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	4	A19,B120,B6,C48
typical_cds_rare	Chr7	52461329	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B120,B23,C12
lof_cds	Chr7	52461393	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B1,C8
typical_cds_rare	Chr7	52461393	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B1,C8
typical_cds_rare	Chr7	52461414	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B112,B88
lof_cds	Chr7	52461422	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	7	A19,A20,B130,B78,B83,C41,D2
lof_cds	Chr7	52461426	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	7	A19,A20,B130,B78,B83,C41,D2
lof_cds	Chr7	52461448	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	A19,B130,C41
typical_cds_rare	Chr7	52461448	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	A19,B130,C41
lof_cds	Chr7	52461452	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	A19,C41
typical_cds_rare	Chr7	52461452	GAA	G	INDEL	2bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	A19,C41
typical_cds_rare	Chr7	52461455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	A19,C41
typical_cds_rare	Chr7	52461457	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	A19,C41
typical_cds_rare	Chr7	52461760	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C12
typical_cds_rare	Chr7	52461804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B86,C39,C47
typical_cds_rare	Chr7	52461809	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	4	B113,B80,C34,C73
lof_cds	Chr7	52461857	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B29,B86,D5
typical_cds_rare	Chr7	52461857	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B29,B86,D5
lof_cds	Chr7	52461918	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B32,C4,C53
typical_cds_rare	Chr7	52461918	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	3	B32,C4,C53
lof_cds	Chr7	52461930	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	65	A1,A14,A19,A23,A24,A25,A4,B1,B103,B104,B105,B106,B111,B114,B120,B124,B129,B130,B132,B139,B26,B27,B3,B32,B35,B38,B44,B54,B56,B65,B74,B78,B8,B80,B81,B82,B9,B90,B92,B93,B94,B97,C12,C28,C31,C38,C41,C43,C45,C51,C52,C56,C60,C69,C7,C73,C80,C81,C87,C9,D10,D11,D2,D7,D9
lof_cds	Chr7	52461936	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	68	A1,A14,A16,A19,A23,A24,A25,A4,B1,B103,B104,B105,B106,B111,B114,B120,B124,B129,B130,B132,B139,B26,B27,B3,B32,B35,B38,B44,B54,B56,B65,B74,B78,B8,B80,B81,B82,B9,B90,B92,B93,B94,B97,C12,C28,C31,C38,C41,C43,C45,C51,C52,C56,C60,C67,C69,C7,C71,C73,C80,C81,C87,C9,D10,D11,D2,D7,D9
lof_cds	Chr7	52461939	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	66	A1,A14,A19,A23,A24,A25,A4,B1,B103,B104,B105,B106,B111,B114,B120,B124,B129,B130,B132,B139,B26,B27,B3,B32,B35,B38,B44,B54,B56,B65,B74,B78,B8,B80,B81,B82,B9,B90,B92,B93,B94,B97,C12,C28,C31,C38,C41,C43,C45,C51,C52,C56,C60,C69,C7,C71,C73,C80,C81,C87,C9,D10,D11,D2,D7,D9
lof_cds	Chr7	52461942	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C71
typical_cds_rare	Chr7	52461942	G	GT	INDEL	1bp_insertion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C71
lof_cds	Chr7	52461966	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	11	B111,B42,B43,B47,B83,B84,B93,C25,C60,C87,D5
lof_cds	Chr7	52461971	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	11	B111,B42,B43,B47,B83,B84,B93,C25,C60,C87,D5
lof_cds	Chr7	52462010	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	18	A18,A5,B113,B128,B134,B35,B66,B88,B90,B95,C50,C52,C58,C62,C77,C9,D10,D3
lof_cds	Chr7	52462011	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	41	A10,A14,A16,A25,A4,B1,B101,B104,B111,B120,B126,B135,B2,B32,B38,B39,B48,B56,B78,B80,B81,B82,C28,C31,C38,C41,C43,C50,C60,C67,C69,C73,C80,C81,C85,C87,C9,D10,D11,D2,D7
lof_cds	Chr7	52462019	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	5	B11,B31,B80,B95,C24
typical_cds_rare	Chr7	52462019	A	AT	INDEL	1bp_insertion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	5	B11,B31,B80,B95,C24
lof_cds	Chr7	52462074	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	56	A1,A10,A14,A25,B1,B101,B103,B106,B114,B120,B122,B124,B126,B130,B135,B139,B22,B32,B38,B39,B46,B48,B54,B56,B65,B73,B76,B78,B79,B82,B9,B90,B93,C19,C28,C31,C38,C45,C49,C51,C56,C57,C6,C66,C69,C7,C70,C73,C81,C82,C85,D11,D2,D5,D7,D9
lof_cds	Chr7	52462089	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	43	A13,A20,A5,B111,B114,B117,B118,B133,B138,B14,B26,B29,B31,B34,B38,B41,B42,B43,B47,B48,B53,B64,B75,B76,B83,B84,B93,B95,B99,C11,C16,C21,C23,C28,C29,C36,C39,C40,C47,C59,C69,D1,D5
lof_cds	Chr7	52462098	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	9	A3,B128,B134,B15,B35,B66,C58,C62,C77
lof_cds	Chr7	52462099	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	7	B110,B113,B67,B90,C50,C52,D3
typical_cds_rare	Chr7	52462115	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B23
typical_cds_rare	Chr7	52462117	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B106,B46
typical_cds_rare	Chr7	52462120	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	B23
lof_cds	Chr7	52462168	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C40
typical_cds_rare	Chr7	52462168	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C40
lof_cds	Chr7	52462231	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C10
typical_cds_rare	Chr7	52462231	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	1	C10
lof_cds	Chr7	52462298	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	7	B127,B21,B68,B8,B85,C26,D6
lof_cds	Chr7	52462305	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	7	B127,B21,B68,B8,B85,C26,D6
typical_cds_rare	Chr7	52462328	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B108,B86
lof_cds	Chr7	52462351	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	5	A7,B39,B56,B85,C29
typical_cds_rare	Chr7	52462351	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	5	A7,B39,B56,B85,C29
typical_cds_rare	Chr7	52462377	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	2	B85,D6
lof_cds	Chr7	52462387	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994379	SmilChr07G004092	130994379	rna-XM_057919424.1	15	A13,A4,A6,B54,B69,B90,B92,C10,C21,C29,C35,C54,C56,C57,D9