source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	53352200	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	3	B26,B56,C23
typical_cds_rare	Chr7	53352279	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	B26,B56
typical_cds_rare	Chr7	53352282	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	B26,B42,B76,C79
typical_cds_rare	Chr7	53352288	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	B26,B42,B76,C79
typical_cds_rare	Chr7	53352450	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	B114,B12,B35,B75,C3
typical_cds_rare	Chr7	53352590	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	B51,D7
typical_cds_rare	Chr7	53352636	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B100
typical_cds_rare	Chr7	53352652	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B100
typical_cds_rare	Chr7	53352682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	C61,C64
typical_cds_rare	Chr7	53352777	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	B48,B94
typical_cds_rare	Chr7	53352785	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	B14,B20,B41,B48,D5
typical_cds_rare	Chr7	53352819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	3	B46,C20,C72
typical_cds_rare	Chr7	53352830	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	3	B61,C41,C63
typical_cds_rare	Chr7	53352845	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	B121,C3,C42,C64,C66
lof_cds	Chr7	53352889	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	36	A18,A2,A3,B104,B105,B113,B119,B12,B126,B127,B128,B132,B136,B32,B40,B41,B5,B61,B64,B72,B85,B95,B98,C13,C17,C31,C33,C47,C52,C71,C73,C79,C82,C86,D11,D8
typical_cds_rare	Chr7	53352930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B56
typical_cds_rare	Chr7	53352977	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	B107,B55,B7,C54
typical_cds_rare	Chr7	53353015	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	B2,B44,B68,B7,C49
typical_cds_rare	Chr7	53353115	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	B104,B25,B82,C83
typical_cds_rare	Chr7	53353122	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	C23
typical_cds_rare	Chr7	53353125	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	B10,B114,C30,D10
typical_cds_rare	Chr7	53353185	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	C71
typical_cds_rare	Chr7	53353224	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	B104,C23
typical_cds_rare	Chr7	53353270	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	C23
typical_cds_rare	Chr7	53353309	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B120
lof_cds	Chr7	53353328	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	A18,C71
typical_cds_rare	Chr7	53353328	T	TC	INDEL	1bp_insertion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	A18,C71
lof_cds	Chr7	53353329	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	116	A15,A16,A20,A5,A6,A7,A9,B1,B102,B104,B105,B106,B107,B108,B109,B111,B112,B115,B117,B119,B129,B13,B130,B131,B132,B133,B134,B135,B138,B16,B17,B18,B2,B21,B22,B23,B25,B27,B30,B31,B32,B33,B34,B36,B37,B38,B39,B4,B45,B48,B49,B53,B55,B56,B58,B59,B60,B62,B63,B64,B7,B71,B72,B73,B74,B8,B83,B84,B86,B88,B90,B91,B92,B96,B97,B99,C10,C12,C13,C16,C17,C18,C19,C21,C22,C23,C26,C28,C33,C37,C39,C41,C43,C45,C46,C47,C49,C5,C50,C60,C62,C70,C72,C75,C78,C79,C8,C81,C82,C84,C86,D1,D11,D2,D7,D9
typical_cds_rare	Chr7	53353353	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	3	A9,B7,C56
typical_cds_rare	Chr7	53353364	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	C56
typical_cds_rare	Chr7	53353468	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	A8,B126,C22,C6
lof_cds	Chr7	53353472	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	6	A9,B123,B140,B22,B89,D8
typical_cds_rare	Chr7	53353478	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	D4
lof_cds	Chr7	53353542	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	B82,C71
typical_cds_rare	Chr7	53353542	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	B82,C71
lof_cds	Chr7	53353588	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	9	A5,B106,B2,B23,B60,B71,B8,C62,C78
typical_cds_rare	Chr7	53353755	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	C5
typical_cds_rare	Chr7	53353807	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	D4
lof_cds	Chr7	53353808	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B17
typical_cds_rare	Chr7	53353808	CT	C	INDEL	1bp_deletion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B17
lof_cds	Chr7	53353809	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	A5,B119,B129,C57,D10
typical_cds_rare	Chr7	53353809	T	TA	INDEL	1bp_insertion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	A5,B119,B129,C57,D10
lof_cds	Chr7	53353812	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	A5,B119,B129,C57,D10
typical_cds_rare	Chr7	53353812	CCG	C	INDEL	2bp_deletion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	A5,B119,B129,C57,D10
lof_cds	Chr7	53353813	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	3	B26,C3,C40
typical_cds_rare	Chr7	53353813	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	3	B26,C3,C40
lof_cds	Chr7	53353816	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B21
typical_cds_rare	Chr7	53353816	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B21
lof_cds	Chr7	53353817	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B17
typical_cds_rare	Chr7	53353817	G	GGC	INDEL	2bp_insertion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B17
typical_cds_rare	Chr7	53353820	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	1	B21
typical_cds_rare	Chr7	53353822	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	B26,C3,C40,D10
typical_cds_rare	Chr7	53353828	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	3	B16,C22,D1
lof_cds	Chr7	53353847	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	6	A5,B119,B129,C29,C57,D10
lof_cds	Chr7	53353849	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	6	A5,B119,B129,C29,C57,D10
lof_cds	Chr7	53353872	C	CTG	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	A5,B129,C29,C57,D10
typical_cds_rare	Chr7	53353872	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	A5,B129,C29,C57,D10
typical_cds_rare	Chr7	53353936	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	A5,C29,C84,D10
lof_cds	Chr7	53353991	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	11	A8,B100,B104,B127,B14,B50,B75,C42,C52,C80,D10
lof_cds	Chr7	53353994	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	6	A10,A19,B117,C11,C64,C76
typical_cds_rare	Chr7	53354001	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	2	B66,C77
lof_cds	Chr7	53354048	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	99	A10,A14,A18,A19,A20,A21,A22,A4,A5,A8,B1,B10,B101,B106,B107,B11,B111,B114,B117,B119,B121,B123,B124,B126,B130,B131,B135,B138,B17,B18,B20,B23,B3,B30,B31,B32,B35,B36,B38,B4,B40,B41,B44,B47,B54,B55,B56,B58,B60,B61,B62,B64,B65,B66,B7,B71,B72,B76,B78,B8,B81,B92,B94,C13,C18,C19,C2,C27,C28,C3,C30,C35,C38,C4,C40,C41,C43,C51,C52,C54,C56,C59,C6,C60,C64,C66,C69,C70,C71,C72,C76,C77,C85,C9,D1,D2,D3,D5,D7
lof_cds	Chr7	53354061	T	TTG	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	95	A10,A14,A18,A19,A20,A21,A22,A5,A8,B1,B10,B101,B106,B107,B11,B111,B114,B117,B119,B121,B123,B124,B126,B130,B131,B135,B138,B17,B18,B20,B23,B3,B30,B31,B35,B36,B38,B4,B41,B44,B47,B54,B55,B56,B58,B60,B61,B62,B64,B65,B66,B7,B71,B72,B76,B78,B8,B81,B91,B92,B94,C13,C18,C19,C2,C27,C28,C3,C30,C35,C4,C40,C41,C43,C51,C52,C54,C56,C59,C60,C65,C66,C69,C70,C71,C72,C76,C77,C85,C9,D1,D2,D3,D5,D7
lof_cds	Chr7	53354062	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	121	A1,A10,A14,A18,A19,A20,A21,A22,A3,A4,A5,A8,A9,B1,B10,B101,B106,B107,B11,B111,B113,B114,B117,B118,B119,B121,B123,B124,B126,B130,B131,B132,B135,B138,B139,B140,B17,B18,B20,B22,B23,B28,B3,B30,B31,B33,B35,B36,B38,B4,B41,B46,B47,B54,B55,B56,B58,B60,B61,B62,B64,B65,B66,B69,B7,B71,B72,B75,B76,B78,B8,B81,B91,B92,B93,B94,C1,C13,C18,C19,C2,C21,C27,C28,C29,C3,C30,C31,C35,C4,C40,C41,C43,C5,C51,C52,C54,C56,C59,C60,C63,C65,C67,C69,C7,C70,C71,C72,C75,C76,C77,C83,C85,C9,D1,D2,D3,D5,D7,D8,D9
lof_cds	Chr7	53354068	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	B104,B44,C42,C66
typical_cds_rare	Chr7	53354068	A	AGT	INDEL	2bp_insertion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	B104,B44,C42,C66
lof_cds	Chr7	53354123	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	12	A25,A4,B115,B136,B27,B67,C39,C49,C57,C6,C75,C8
typical_cds_rare	Chr7	53354151	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	4	A8,B135,B90,C30
lof_cds	Chr7	53354155	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	9	B11,B74,B91,B97,C3,C4,C72,C82,D9
lof_cds	Chr7	53354422	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	A14,B54,C40,C55,C57
typical_cds_rare	Chr7	53354422	C	CCA	INDEL	2bp_insertion	CDS_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	5	A14,B54,C40,C55,C57
lof_cds	Chr7	53354448	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC130994397	SmilChr07G004151	130994397	rna-XM_057919439.1	7	B31,B42,B83,C12,C3,C43,C49