source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	55668199	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	143	A1,A10,A2,A21,A22,A23,A24,A25,A5,A8,B10,B100,B101,B102,B103,B104,B107,B108,B109,B111,B113,B117,B118,B12,B122,B123,B124,B128,B130,B131,B134,B135,B136,B139,B140,B17,B19,B2,B20,B21,B26,B28,B29,B3,B30,B31,B34,B35,B36,B4,B40,B42,B43,B45,B47,B48,B49,B51,B54,B55,B56,B59,B60,B64,B66,B69,B7,B71,B73,B74,B75,B78,B79,B8,B81,B84,B85,B9,B91,B93,B95,B96,B97,B98,C1,C11,C13,C16,C17,C19,C21,C23,C24,C26,C29,C3,C31,C35,C37,C40,C41,C42,C43,C44,C47,C5,C50,C51,C52,C55,C56,C57,C58,C59,C6,C60,C61,C62,C64,C65,C66,C68,C69,C7,C71,C73,C76,C78,C80,C82,C83,C84,C85,C86,C87,C9,D1,D10,D2,D4,D5,D8,D9
lof_cds	Chr7	55668221	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	131	A1,A10,A2,A21,A22,A23,A24,A25,A5,A8,B10,B100,B101,B102,B103,B104,B107,B108,B111,B113,B117,B118,B12,B122,B123,B124,B128,B130,B134,B135,B136,B139,B140,B17,B19,B20,B21,B26,B28,B29,B3,B30,B31,B34,B35,B36,B4,B40,B42,B43,B45,B47,B48,B49,B51,B54,B55,B56,B59,B60,B64,B69,B7,B71,B73,B74,B75,B78,B79,B8,B81,B84,B85,B9,B91,B95,B96,B97,B98,C1,C11,C13,C16,C17,C19,C21,C23,C24,C26,C29,C3,C31,C35,C40,C41,C42,C43,C44,C5,C50,C51,C52,C56,C57,C59,C6,C60,C61,C62,C64,C65,C66,C68,C69,C7,C71,C73,C76,C78,C82,C83,C84,C85,C86,C87,C9,D1,D10,D5,D8,D9
lof_cds	Chr7	55668225	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	120	A1,A10,A2,A21,A22,A23,A24,A25,A5,A8,B10,B100,B101,B102,B103,B104,B107,B108,B111,B113,B117,B118,B12,B122,B123,B128,B130,B134,B135,B136,B139,B140,B17,B19,B20,B21,B26,B28,B29,B3,B30,B31,B34,B35,B36,B4,B40,B42,B43,B45,B49,B51,B54,B56,B59,B64,B69,B7,B73,B74,B75,B78,B79,B8,B81,B84,B85,B9,B91,B95,B96,B97,B98,C11,C13,C16,C17,C21,C23,C24,C26,C3,C31,C35,C40,C41,C42,C43,C44,C5,C50,C51,C52,C56,C57,C59,C6,C60,C61,C64,C65,C66,C68,C69,C7,C71,C73,C76,C78,C82,C83,C84,C85,C86,C87,C9,D10,D5,D8,D9
lof_cds	Chr7	55668228	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	6	B2,B47,B55,B60,C58,C80
lof_cds	Chr7	55668237	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	8	B2,B47,B55,B60,B66,C1,C58,C80
lof_cds	Chr7	55668241	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	155	A1,A10,A11,A13,A14,A19,A2,A20,A21,A22,A23,A24,A25,A4,A5,A6,A8,A9,B10,B100,B101,B102,B104,B106,B107,B108,B111,B115,B117,B118,B120,B122,B123,B124,B125,B128,B129,B130,B134,B135,B136,B138,B139,B140,B17,B19,B2,B20,B21,B23,B25,B26,B28,B29,B3,B30,B31,B34,B35,B36,B37,B4,B40,B42,B43,B45,B47,B48,B49,B51,B52,B54,B55,B56,B59,B60,B63,B64,B69,B7,B71,B73,B74,B75,B76,B78,B79,B8,B81,B84,B85,B86,B9,B91,B95,B96,B97,B98,C1,C11,C16,C17,C18,C19,C2,C20,C21,C24,C25,C26,C28,C29,C3,C35,C40,C42,C43,C44,C45,C5,C50,C51,C52,C55,C56,C57,C59,C6,C60,C61,C62,C64,C65,C66,C68,C69,C7,C71,C73,C75,C76,C78,C79,C82,C83,C84,C85,C86,C87,C9,D1,D10,D5,D7,D8
lof_cds	Chr7	55668277	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	25	A18,A23,A6,A8,B108,B119,B127,B137,B20,B44,B61,B74,B81,B85,B87,B89,B91,C14,C27,C36,C37,C39,C72,D11,D5
lof_cds	Chr7	55668280	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	27	B113,B123,B18,B2,B22,B3,B32,B47,B55,B57,B60,B64,B66,B93,B99,C1,C15,C20,C3,C32,C33,C36,C41,C58,C73,C80,D11
lof_cds	Chr7	55668365	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	73	A10,A11,A19,A22,A6,B10,B104,B107,B109,B118,B121,B122,B124,B130,B131,B135,B136,B21,B28,B29,B30,B31,B34,B35,B36,B4,B42,B43,B47,B49,B51,B54,B56,B59,B64,B69,B7,B74,B78,B8,B84,B85,B86,B88,B95,B96,B97,B98,C17,C23,C24,C31,C32,C35,C40,C43,C55,C56,C57,C60,C65,C68,C71,C73,C78,C83,C85,C86,C87,C9,D10,D2,D9
typical_cds_rare	Chr7	55668401	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B135
lof_cds	Chr7	55668410	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	140	A1,A10,A11,A19,A2,A21,A22,A23,A24,A25,A5,A6,A7,A8,B10,B100,B101,B102,B103,B104,B107,B108,B109,B11,B111,B117,B118,B121,B122,B123,B124,B128,B130,B131,B134,B135,B136,B139,B140,B17,B19,B20,B21,B26,B28,B29,B3,B30,B31,B34,B35,B36,B4,B40,B42,B43,B45,B47,B48,B49,B5,B51,B54,B55,B56,B59,B60,B64,B69,B7,B73,B74,B75,B78,B79,B8,B81,B84,B85,B86,B88,B9,B91,B95,B96,B97,B98,C1,C11,C13,C17,C19,C21,C23,C24,C26,C29,C3,C31,C32,C35,C40,C42,C43,C44,C5,C50,C51,C52,C55,C56,C57,C59,C6,C60,C61,C62,C64,C65,C66,C68,C69,C7,C71,C73,C76,C78,C82,C83,C84,C86,C87,C9,D1,D10,D2,D4,D5,D8,D9
typical_cds_rare	Chr7	55668444	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B104
lof_cds	Chr7	55668453	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	9	A20,B119,B22,B50,B67,C12,C29,C49,C74
lof_cds	Chr7	55668454	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	9	A20,B119,B22,B50,B67,C12,C29,C49,C74
typical_cds_rare	Chr7	55668467	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B21
typical_cds_rare	Chr7	55668477	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	2	B137,B70
lof_cds	Chr7	55668515	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	15	B11,B12,B18,B2,B3,B47,B55,B57,B60,B68,B93,C3,C58,C80,D11
lof_cds	Chr7	55668551	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	79	A10,A11,A19,A21,A22,A6,B10,B104,B107,B109,B111,B118,B122,B124,B130,B131,B135,B136,B139,B26,B28,B29,B30,B31,B35,B36,B4,B42,B43,B47,B49,B51,B54,B56,B59,B69,B7,B74,B78,B79,B8,B84,B85,B86,B91,B95,B96,B97,B98,C11,C13,C17,C23,C24,C31,C32,C35,C40,C43,C55,C56,C57,C60,C65,C68,C69,C71,C73,C76,C78,C82,C83,C84,C86,C87,C9,D10,D2,D9
typical_cds_rare	Chr7	55668559	GC	*	INDEL	1bp_deletion	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B53
lof_cds	Chr7	55668563	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B21
typical_cds_rare	Chr7	55668563	C	CA	INDEL	1bp_insertion	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B21
typical_cds_rare	Chr7	55668577	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	3	B118,B15,B91
typical_cds_rare	Chr7	55668614	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B2
typical_cds_rare	Chr7	55668617	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	2	B41,C77
typical_cds_rare	Chr7	55668681	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	3	B52,C37,C54
typical_cds_rare	Chr7	55668694	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	2	B122,C48
typical_cds_rare	Chr7	55668701	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	3	B139,B52,B85
typical_cds_rare	Chr7	55668702	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	4	A20,B119,B139,B85
lof_cds	Chr7	55668706	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	6	B13,B33,B35,B62,B95,C60
lof_cds	Chr7	55668708	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	6	B13,B33,B35,B62,B95,C60
typical_cds_rare	Chr7	55668712	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	2	B57,B60
typical_cds_rare	Chr7	55668715	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B57
lof_cds	Chr7	55668748	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	35	A25,A4,B11,B110,B117,B12,B18,B19,B2,B21,B3,B32,B38,B39,B47,B50,B52,B54,B57,B59,B60,B68,B77,B9,B93,C22,C26,C3,C4,C49,C58,C63,C74,C80,D11
typical_cds_rare	Chr7	55669075	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	5	B138,B21,B22,B45,C72
typical_cds_rare	Chr7	55669160	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	3	B37,B71,C16
lof_cds	Chr7	55669167	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	3	B123,B18,C47
typical_cds_rare	Chr7	55669167	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	3	B123,B18,C47
lof_cds	Chr7	55669174	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B123
typical_cds_rare	Chr7	55669174	C	CG	INDEL	1bp_insertion	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B123
typical_cds_rare	Chr7	55669178	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994936	SmilChr07G004310	130994936	rna-XM_057920118.1	1	B104