source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	56692416	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	C75
lof_cds	Chr7	56692593	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	C71
typical_cds_rare	Chr7	56692593	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	C71
lof_cds	Chr7	56692703	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B114
typical_cds_rare	Chr7	56692703	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B114
typical_cds_rare	Chr7	56692706	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B114
lof_cds	Chr7	56692710	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	2	C22,C80
typical_cds_rare	Chr7	56692710	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	2	C22,C80
lof_cds	Chr7	56692729	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	C77
typical_cds_rare	Chr7	56692729	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	C77
typical_cds_rare	Chr7	56692744	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	3	B46,B90,D7
typical_cds_rare	Chr7	56692875	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	A15,B63,B84,C24,C67
typical_cds_rare	Chr7	56692896	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	3	B108,B23,C31
typical_cds_rare	Chr7	56692918	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	B23,B49,B59,C39,C51
typical_cds_rare	Chr7	56692966	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	B117,C27,C37,C50,C65
typical_cds_rare	Chr7	56692979	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	D6
typical_cds_rare	Chr7	56693099	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	2	A3,B135
typical_cds_rare	Chr7	56693110	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	A3
lof_cds	Chr7	56693130	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	84	A13,A14,A15,A18,A21,A24,A25,A3,A9,B10,B102,B108,B11,B111,B113,B115,B126,B127,B134,B135,B136,B137,B138,B17,B19,B22,B26,B29,B33,B40,B43,B46,B48,B49,B5,B52,B54,B56,B59,B60,B61,B63,B66,B7,B70,B71,B73,B74,B75,B79,B8,B83,B85,B88,B89,B92,B94,C11,C12,C15,C18,C19,C23,C24,C25,C28,C29,C31,C48,C53,C55,C57,C62,C69,C72,C77,C78,C79,C80,C81,C84,C87,D1,D3
lof_cds	Chr7	56693133	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	44	A14,A18,A3,B10,B11,B111,B113,B126,B127,B135,B136,B137,B19,B22,B29,B40,B43,B49,B5,B52,B56,B59,B60,B7,B74,B79,B8,B83,B85,B92,B94,C15,C19,C25,C28,C31,C48,C53,C78,C79,C80,C81,C84,D1
typical_cds_rare	Chr7	56693184	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	A14,B29,B79,C80,C84
lof_cds	Chr7	56693221	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B73
typical_cds_rare	Chr7	56693221	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B73
typical_cds_rare	Chr7	56693301	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B47
typical_cds_rare	Chr7	56693313	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B81,C29,C35,C75
typical_cds_rare	Chr7	56693343	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B104
typical_cds_rare	Chr7	56693348	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	C10
typical_cds_rare	Chr7	56693355	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B94
typical_cds_rare	Chr7	56693373	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	2	B105,B47
typical_cds_rare	Chr7	56693381	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	3	A18,B11,B3
lof_cds	Chr7	56693635	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	102	A11,A16,A23,A25,A5,A6,A7,B1,B100,B102,B103,B106,B107,B109,B111,B112,B114,B117,B118,B123,B128,B131,B133,B136,B139,B140,B15,B16,B17,B19,B21,B30,B31,B33,B35,B36,B38,B39,B4,B41,B42,B43,B46,B50,B54,B57,B59,B6,B62,B64,B68,B69,B70,B74,B75,B77,B78,B80,B81,B85,B87,B91,B98,C1,C11,C17,C18,C19,C25,C28,C35,C36,C37,C43,C44,C46,C47,C51,C52,C60,C61,C63,C67,C69,C7,C76,C77,C78,C8,C80,C82,C83,C84,C85,C86,C9,D11,D2,D3,D4,D7,D8
typical_cds_rare	Chr7	56693952	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B98
typical_cds_rare	Chr7	56693959	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	3	B38,B95,C47
typical_cds_rare	Chr7	56693991	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	2	A4,C32
typical_cds_rare	Chr7	56694014	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	B38,B95,C47,C65,C75
lof_cds	Chr7	56694043	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	A4
typical_cds_rare	Chr7	56694043	T	TGG	INDEL	2bp_insertion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	A4
typical_cds_rare	Chr7	56694168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	3	A13,B23,C37
typical_cds_rare	Chr7	56694172	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B128,B134,B31,C1
lof_cds	Chr7	56694265	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	7	A18,B11,B140,B3,C12,C14,C54
typical_cds_rare	Chr7	56694330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	C71
typical_cds_rare	Chr7	56694500	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	D11
typical_cds_rare	Chr7	56694598	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	D4
typical_cds_rare	Chr7	56694636	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	A13
typical_cds_rare	Chr7	56694641	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B83
typical_cds_rare	Chr7	56694648	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	3	A2,B83,B95
lof_cds	Chr7	56694685	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B117,B26,B93,C82
typical_cds_rare	Chr7	56694685	TA	T	INDEL	1bp_deletion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B117,B26,B93,C82
lof_cds	Chr7	56694688	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	B117,B26,B93,C74,C82
typical_cds_rare	Chr7	56694688	A	AC	INDEL	1bp_insertion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	B117,B26,B93,C74,C82
typical_cds_rare	Chr7	56694705	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	2	A4,B70
lof_cds	Chr7	56694728	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	186	A10,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A4,A5,A6,A8,A9,B1,B10,B100,B102,B103,B104,B105,B106,B107,B108,B109,B111,B114,B115,B117,B118,B119,B120,B121,B122,B123,B125,B126,B128,B130,B132,B134,B135,B136,B137,B138,B139,B15,B17,B18,B19,B20,B21,B23,B24,B25,B26,B27,B28,B30,B31,B32,B35,B39,B42,B43,B44,B45,B46,B47,B48,B5,B50,B52,B53,B54,B55,B56,B58,B59,B6,B60,B63,B66,B67,B69,B7,B70,B71,B72,B73,B75,B76,B77,B79,B8,B80,B81,B83,B85,B88,B89,B9,B92,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C14,C15,C16,C18,C19,C2,C20,C21,C22,C24,C25,C27,C28,C29,C3,C30,C31,C32,C37,C38,C39,C4,C40,C44,C45,C46,C47,C48,C50,C51,C53,C54,C55,C56,C57,C58,C60,C61,C62,C63,C64,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C76,C78,C79,C80,C81,C82,C85,C86,C9,D10,D11,D2,D3,D5,D6,D7,D9
lof_cds	Chr7	56694731	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	179	A1,A10,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A24,A25,A4,A5,A8,A9,B1,B10,B100,B102,B103,B104,B105,B106,B107,B108,B109,B114,B115,B117,B118,B119,B120,B121,B122,B123,B125,B126,B128,B130,B132,B134,B135,B136,B138,B139,B15,B17,B18,B19,B21,B23,B24,B25,B26,B27,B28,B30,B31,B35,B39,B42,B43,B44,B45,B46,B47,B48,B50,B52,B53,B54,B55,B56,B58,B59,B6,B60,B63,B66,B67,B69,B7,B70,B71,B72,B73,B75,B76,B77,B79,B8,B80,B81,B85,B88,B89,B9,B92,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C14,C15,C16,C18,C19,C2,C20,C21,C22,C24,C25,C27,C28,C29,C3,C30,C31,C32,C37,C38,C39,C4,C40,C44,C45,C46,C47,C48,C50,C51,C53,C54,C55,C56,C57,C58,C60,C61,C62,C63,C64,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C76,C78,C79,C80,C81,C82,C85,C86,C9,D10,D11,D2,D3,D5,D6,D7,D9
lof_cds	Chr7	56694734	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	A10,A9,B5,C71,D10
typical_cds_rare	Chr7	56694734	T	TC	INDEL	1bp_insertion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	A10,A9,B5,C71,D10
lof_cds	Chr7	56694740	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	110	A1,A10,A13,A18,A19,A2,A21,A22,A24,A4,A5,A7,A9,B1,B10,B103,B104,B105,B106,B107,B108,B110,B111,B115,B117,B119,B120,B122,B125,B128,B130,B132,B134,B136,B139,B18,B20,B21,B23,B25,B26,B28,B30,B31,B32,B39,B4,B42,B43,B44,B45,B46,B5,B50,B52,B56,B58,B60,B66,B67,B69,B7,B70,B77,B80,B83,B85,B89,B9,B93,B94,B97,B98,C1,C10,C14,C15,C16,C18,C19,C20,C21,C22,C24,C27,C28,C29,C3,C32,C39,C40,C46,C47,C55,C57,C58,C62,C66,C67,C68,C7,C70,C71,C73,C74,C76,C82,D10,D2,D5
lof_cds	Chr7	56694745	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	141	A1,A10,A13,A15,A16,A18,A19,A2,A21,A22,A24,A4,A5,A7,A9,B1,B10,B103,B104,B105,B106,B107,B108,B110,B111,B114,B115,B117,B119,B120,B121,B122,B125,B128,B130,B132,B134,B136,B138,B139,B18,B20,B21,B23,B25,B26,B28,B30,B31,B32,B39,B4,B42,B43,B44,B45,B46,B5,B50,B52,B54,B55,B56,B58,B6,B60,B63,B66,B67,B69,B7,B70,B71,B72,B73,B76,B77,B79,B80,B83,B85,B88,B89,B9,B93,B94,B96,B97,B98,C1,C10,C11,C14,C15,C16,C18,C19,C20,C21,C22,C24,C25,C27,C28,C29,C3,C32,C37,C39,C4,C40,C45,C46,C47,C48,C49,C53,C55,C57,C58,C62,C64,C66,C67,C68,C7,C70,C71,C73,C74,C76,C80,C81,C82,C86,D10,D2,D3,D5,D6,D9
lof_cds	Chr7	56694814	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	A21,A4,B66,B77,C20
typical_cds_rare	Chr7	56694814	TA	T	INDEL	1bp_deletion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	A21,A4,B66,B77,C20
typical_cds_rare	Chr7	56694821	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B132,B36,C10,C73
typical_cds_rare	Chr7	56694857	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	2	C68,C70
lof_cds	Chr7	56694906	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B105,B23,B64,C39
typical_cds_rare	Chr7	56694906	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B105,B23,B64,C39
typical_cds_rare	Chr7	56694972	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	A23
lof_cds	Chr7	56694975	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	11	B20,B21,B47,B5,B9,C20,C24,C38,C66,C74,C84
lof_cds	Chr7	56694977	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	11	B20,B21,B47,B5,B9,C20,C24,C38,C66,C74,C84
lof_cds	Chr7	56694983	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	A23
typical_cds_rare	Chr7	56694983	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	A23
lof_cds	Chr7	56694986	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	A23
typical_cds_rare	Chr7	56694986	A	ATG	INDEL	2bp_insertion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	A23
typical_cds_rare	Chr7	56695081	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	1	B101
lof_cds	Chr7	56695122	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	3	B114,B77,C61
typical_cds_rare	Chr7	56695122	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	3	B114,B77,C61
lof_cds	Chr7	56695124	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	2	B114,C61
typical_cds_rare	Chr7	56695124	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	2	B114,C61
typical_cds_rare	Chr7	56695201	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	3	B137,B63,B77
typical_cds_rare	Chr7	56695270	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B108,B40,C57,C59
lof_cds	Chr7	56695279	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B100,B108,C57,C59
typical_cds_rare	Chr7	56695279	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	4	B100,B108,C57,C59
typical_cds_rare	Chr7	56695305	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994801	SmilChr07G004406	130994801	rna-XM_057919865.1	5	B108,B40,C30,C57,C59