source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	58464732	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	D4
lof_cds	Chr7	58464778	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	15	A20,A7,B124,B134,B45,B68,B76,B8,C2,C23,C31,C33,C39,C60,D6
lof_cds	Chr7	58464804	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	D10,D11
typical_cds_rare	Chr7	58464804	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	D10,D11
lof_cds	Chr7	58464837	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	D10,D11
typical_cds_rare	Chr7	58464837	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	D10,D11
lof_cds	Chr7	58464841	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	20	A20,A9,B103,B114,B132,B20,B21,B24,B43,B71,B77,B79,B8,B95,C1,C4,C57,C81,C9,D8
lof_cds	Chr7	58464844	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	20	A20,A9,B103,B114,B132,B20,B21,B24,B43,B71,B77,B79,B8,B95,C1,C4,C57,C81,C9,D8
lof_cds	Chr7	58464865	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	26	A20,A9,B103,B114,B132,B18,B20,B21,B24,B43,B6,B71,B77,B79,B8,B84,B95,C1,C33,C4,C57,C60,C78,C81,C9,D8
lof_cds	Chr7	58464868	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	26	A20,A9,B103,B114,B132,B18,B20,B21,B24,B43,B6,B71,B77,B79,B8,B84,B95,C1,C33,C4,C57,C60,C78,C81,C9,D8
typical_cds_rare	Chr7	58464873	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	4	A21,B111,B83,C59
typical_cds_rare	Chr7	58464877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	5	B120,B125,C49,C71,D1
typical_cds_rare	Chr7	58464906	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B89
typical_cds_rare	Chr7	58464966	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	5	B12,B60,C16,C58,C59
typical_cds_rare	Chr7	58464973	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	D10,D11
lof_cds	Chr7	58464980	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	D4
typical_cds_rare	Chr7	58464980	GAC	G	INDEL	2bp_deletion	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	D4
typical_cds_rare	Chr7	58464991	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B89
typical_cds_rare	Chr7	58465003	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	4	B118,B140,B26,B76
lof_cds	Chr7	58465004	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	40	A15,A19,A7,B102,B103,B109,B11,B122,B123,B137,B15,B17,B21,B39,B5,B64,B67,B72,B79,B83,B94,C10,C14,C17,C18,C2,C28,C35,C39,C43,C45,C47,C53,C70,C76,C78,C79,C86,C9,D8
lof_cds	Chr7	58465026	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	4	B110,B51,C57,C74
typical_cds_rare	Chr7	58465026	T	TA	INDEL	1bp_insertion	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	4	B110,B51,C57,C74
lof_cds	Chr7	58465047	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	A1,B63
typical_cds_rare	Chr7	58465047	GC	G	INDEL	1bp_deletion	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	A1,B63
lof_cds	Chr7	58465052	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B95
typical_cds_rare	Chr7	58465052	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B95
typical_cds_rare	Chr7	58465084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	5	B126,B49,C40,C55,C6
typical_cds_rare	Chr7	58465091	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B89
lof_cds	Chr7	58465113	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	4	B91,B92,C40,C41
typical_cds_rare	Chr7	58465113	T	TC	INDEL	1bp_insertion	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	4	B91,B92,C40,C41
typical_cds_rare	Chr7	58465127	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	B26,B28
lof_cds	Chr7	58465148	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	5	B135,B33,B59,C73,C81
typical_cds_rare	Chr7	58465148	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	5	B135,B33,B59,C73,C81
lof_cds	Chr7	58465160	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	12	B121,B128,B131,B135,B33,B50,B59,B64,C57,C73,C81,D7
typical_cds_rare	Chr7	58465204	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	5	B124,B45,B68,B76,C2
typical_cds_rare	Chr7	58465211	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	B93,C81
lof_cds	Chr7	58465274	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	24	A20,B103,B107,B124,B127,B128,B138,B29,B40,B45,B49,B63,B68,B73,B81,B88,C10,C28,C3,C69,C79,C84,C9,D7
lof_cds	Chr7	58465277	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	12	A14,A2,B114,B29,B65,B69,B71,C15,C29,C61,C80,D5
lof_cds	Chr7	58465316	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	39	A1,A2,A20,A23,B10,B101,B103,B107,B114,B124,B128,B135,B138,B20,B29,B40,B49,B56,B60,B68,B71,B73,B79,B82,B88,B93,C10,C11,C15,C27,C28,C48,C60,C67,C79,C84,C9,D7,D8
lof_cds	Chr7	58465321	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	41	A1,A20,A23,B10,B101,B103,B107,B124,B128,B135,B138,B20,B29,B40,B49,B54,B56,B60,B68,B73,B79,B8,B82,B88,B9,B93,C10,C11,C19,C25,C27,C28,C48,C60,C63,C67,C79,C84,C9,D7,D8
lof_cds	Chr7	58465329	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	36	A1,A20,A23,B10,B101,B103,B107,B128,B135,B138,B20,B29,B40,B49,B54,B56,B60,B68,B73,B79,B8,B88,B9,B93,C10,C11,C25,C27,C28,C48,C60,C63,C67,C9,D7,D8
lof_cds	Chr7	58465365	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	13	A2,B114,B29,B65,B69,B71,B73,B82,C15,C29,C48,C49,D5
lof_cds	Chr7	58465367	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	20	A1,A20,A23,B101,B127,B128,B135,B20,B56,B60,B68,B79,B88,B93,C11,C27,C60,C67,C9,D8
lof_cds	Chr7	58465375	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	5	B49,B54,B9,C10,C67
typical_cds_rare	Chr7	58465375	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	5	B49,B54,B9,C10,C67
lof_cds	Chr7	58465378	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	12	A1,B101,B127,B128,B56,B60,B68,B79,B93,C11,C27,C67
lof_cds	Chr7	58465393	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	50	A3,A6,B10,B103,B105,B107,B127,B129,B133,B134,B138,B15,B21,B3,B31,B32,B4,B40,B41,B49,B54,B56,B6,B66,B70,B8,B80,B9,B90,B92,B96,B97,C10,C11,C14,C19,C20,C25,C27,C28,C30,C38,C61,C63,C67,C69,C77,C78,C79,D7
lof_cds	Chr7	58465440	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	29	A13,A2,A21,B1,B100,B137,B140,B25,B27,B35,B41,B43,B59,B61,B69,B70,B9,C33,C38,C41,C45,C63,C64,C74,C85,C86,C87,D11,D5
lof_cds	Chr7	58465441	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	27	A13,A2,A21,B1,B100,B137,B140,B27,B35,B41,B43,B59,B61,B69,B70,B9,C33,C38,C41,C45,C63,C64,C74,C85,C86,C87,D5
typical_cds_rare	Chr7	58466270	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	B59,C74
typical_cds_rare	Chr7	58466281	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	B11,C30
typical_cds_rare	Chr7	58466290	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B89
lof_cds	Chr7	58466340	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B78
typical_cds_rare	Chr7	58466340	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B78
typical_cds_rare	Chr7	58466371	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	3	B140,B26,D11
typical_cds_rare	Chr7	58466377	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	4	B22,B85,C24,C37
typical_cds_rare	Chr7	58466433	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	2	B35,C1
typical_cds_rare	Chr7	58466577	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B28
typical_cds_rare	Chr7	58466592	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	4	A21,B111,B83,C59
typical_cds_rare	Chr7	58466593	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995149	SmilChr07G004567	130995149	rna-XM_057920301.1,rna-XM_057920302.1,rna-XM_057920303.1	1	B82