source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr7	58780313	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	6	B119,B61,C3,C38,C4,D10
lof_cds	Chr7	58780364	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	6	B111,B12,B55,B57,C23,C56
lof_cds	Chr7	58780412	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B136
typical_cds_rare	Chr7	58780412	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B136
typical_cds_rare	Chr7	58780415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	3	B88,C17,C79
typical_cds_rare	Chr7	58780442	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B22
lof_cds	Chr7	58780453	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B22
typical_cds_rare	Chr7	58780453	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B22
typical_cds_rare	Chr7	58780459	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	B104,B78
typical_cds_rare	Chr7	58780477	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B22
lof_cds	Chr7	58780518	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B22
typical_cds_rare	Chr7	58780518	ACG	A	INDEL	2bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B22
typical_cds_rare	Chr7	58780527	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	B47,C87
lof_cds	Chr7	58780552	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	40	A10,A13,A4,B1,B100,B102,B103,B108,B12,B120,B122,B125,B13,B132,B137,B14,B19,B25,B35,B39,B47,B54,B55,B62,B74,B9,C14,C22,C23,C36,C41,C45,C63,C65,C66,C78,C83,C86,C87,D3
lof_cds	Chr7	58780563	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	59	A14,A20,A23,A3,B10,B100,B101,B108,B117,B123,B124,B132,B136,B15,B24,B29,B34,B38,B42,B47,B50,B51,B54,B56,B59,B62,B65,B66,B67,B69,B71,B73,B74,B83,B85,B86,B94,B96,C21,C22,C24,C25,C26,C36,C41,C43,C45,C52,C61,C62,C64,C65,C70,C73,C74,C80,D10,D3,D8
lof_cds	Chr7	58780566	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	B122,B22
typical_cds_rare	Chr7	58780566	G	GGA	INDEL	2bp_insertion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	B122,B22
lof_cds	Chr7	58780569	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	57	A14,A20,A23,A3,B10,B100,B101,B108,B117,B123,B124,B132,B136,B15,B24,B29,B34,B38,B42,B47,B50,B51,B54,B56,B59,B62,B65,B66,B67,B69,B73,B74,B83,B85,B86,B94,B96,C21,C22,C24,C25,C26,C36,C41,C43,C45,C52,C62,C64,C65,C70,C73,C74,C80,D10,D3,D8
lof_cds	Chr7	58780602	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	A14,B30,B49,B93
typical_cds_rare	Chr7	58780602	CT	C	INDEL	1bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	A14,B30,B49,B93
lof_cds	Chr7	58780604	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B22
typical_cds_rare	Chr7	58780604	C	CA	INDEL	1bp_insertion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B22
typical_cds_rare	Chr7	58780610	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	B132,B35,B64,C55
typical_cds_rare	Chr7	58780615	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	B35,C55
lof_cds	Chr7	58780670	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B26
typical_cds_rare	Chr7	58780670	C	CGT	INDEL	2bp_insertion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B26
lof_cds	Chr7	58780673	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	3	B138,B29,B80
typical_cds_rare	Chr7	58780673	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	3	B138,B29,B80
lof_cds	Chr7	58780677	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	3	B138,B29,B80
typical_cds_rare	Chr7	58780677	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	3	B138,B29,B80
typical_cds_rare	Chr7	58780679	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	B136,B88,B89,C67
lof_cds	Chr7	58780682	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	C46,C57
typical_cds_rare	Chr7	58780682	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	C46,C57
lof_cds	Chr7	58780696	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	B23,B80,C46,C84
typical_cds_rare	Chr7	58780696	T	TC	INDEL	1bp_insertion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	B23,B80,C46,C84
lof_cds	Chr7	58780698	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	3	B23,B80,C84
typical_cds_rare	Chr7	58780698	A	AC	INDEL	1bp_insertion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	3	B23,B80,C84
lof_cds	Chr7	58780702	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	B11,C46,C57,C67
typical_cds_rare	Chr7	58780702	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	B11,C46,C57,C67
lof_cds	Chr7	58780704	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	9	B136,B138,B2,B29,B80,B88,B89,C15,C86
lof_cds	Chr7	58780706	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	11	B136,B138,B2,B23,B29,B80,B88,B89,C15,C84,C86
lof_cds	Chr7	58780708	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	11	B136,B138,B2,B23,B29,B80,B88,B89,C15,C84,C86
typical_cds_rare	Chr7	58780723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	B23,C84
typical_cds_rare	Chr7	58780736	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B88
typical_cds_rare	Chr7	58780743	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B85
lof_cds	Chr7	58780757	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	D3
typical_cds_rare	Chr7	58780757	TGC	T	INDEL	2bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	D3
lof_cds	Chr7	58780758	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B59
typical_cds_rare	Chr7	58780758	GC	G	INDEL	1bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B59
lof_cds	Chr7	58780767	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B6
typical_cds_rare	Chr7	58780767	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B6
typical_cds_rare	Chr7	58780770	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	B23,C84
lof_cds	Chr7	58780797	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	33	A1,A25,A4,B103,B119,B120,B123,B132,B19,B24,B37,B51,B52,B54,B56,B59,B61,B69,B77,B9,B93,B96,C22,C25,C3,C36,C4,C50,C6,C62,C63,C73,C74
lof_cds	Chr7	58780842	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	5	B137,B34,B87,C41,C66
typical_cds_rare	Chr7	58780842	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	5	B137,B34,B87,C41,C66
lof_cds	Chr7	58780845	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	B137,B87,C41,C66
typical_cds_rare	Chr7	58780845	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	B137,B87,C41,C66
typical_cds_rare	Chr7	58782195	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B82
typical_cds_rare	Chr7	58782222	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	B47,C87
typical_cds_rare	Chr7	58782259	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B127
typical_cds_rare	Chr7	58803004	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	D11
lof_cds	Chr7	58803009	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	99	A10,A11,A23,A25,A4,B1,B100,B103,B108,B109,B11,B113,B118,B119,B120,B121,B122,B125,B127,B13,B132,B133,B135,B137,B139,B19,B23,B24,B26,B27,B33,B34,B35,B36,B37,B44,B46,B47,B51,B52,B54,B58,B59,B61,B62,B69,B70,B71,B74,B75,B77,B78,B80,B86,B89,B9,B91,B99,C1,C21,C22,C25,C26,C27,C28,C3,C30,C32,C33,C36,C38,C4,C41,C43,C45,C46,C49,C54,C56,C6,C62,C63,C64,C65,C68,C70,C71,C74,C83,C85,C86,C87,D1,D10,D11,D3,D4,D5,D7
typical_cds_rare	Chr7	58803017	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	C31,C39
typical_cds_rare	Chr7	58803032	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	3	B131,B27,C51
typical_cds_rare	Chr7	58803040	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	A2,B64
typical_cds_rare	Chr7	58803055	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	5	A5,B112,B2,B89,C58
typical_cds_rare	Chr7	58803072	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B59
typical_cds_rare	Chr7	58803163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	B99
lof_cds	Chr7	58803183	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	13	A14,A22,A4,A7,B136,B139,B31,B36,B65,B69,C23,C24,C29
lof_cds	Chr7	58803246	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	C40
typical_cds_rare	Chr7	58803246	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	C40
typical_cds_rare	Chr7	58803259	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	C31,C39
lof_cds	Chr7	58803270	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	A21
typical_cds_rare	Chr7	58803270	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	A21
typical_cds_rare	Chr7	58803274	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	3	B28,B63,B76
typical_cds_rare	Chr7	58803276	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	A21
lof_cds	Chr7	58803299	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	7	B104,B108,B44,C32,C54,C6,C68
typical_cds_rare	Chr7	58803331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	4	B126,B135,B20,B66
lof_cds	Chr7	58803354	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	172	A1,A13,A16,A18,A2,A20,A21,A23,A24,A25,A3,A4,A5,A6,A7,A9,B10,B100,B101,B103,B104,B108,B110,B111,B112,B114,B115,B117,B119,B12,B120,B121,B123,B124,B126,B127,B128,B129,B13,B130,B131,B132,B136,B137,B138,B14,B140,B19,B2,B20,B21,B23,B24,B26,B27,B28,B29,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B41,B42,B43,B45,B48,B49,B5,B50,B51,B52,B54,B55,B56,B58,B59,B6,B61,B62,B66,B69,B7,B70,B71,B73,B74,B75,B76,B77,B78,B79,B82,B83,B84,B85,B86,B87,B88,B89,B9,B91,B96,B97,B98,B99,C1,C11,C13,C16,C19,C2,C22,C23,C25,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C41,C42,C46,C47,C49,C5,C50,C51,C52,C54,C55,C56,C58,C59,C6,C61,C62,C63,C64,C66,C67,C68,C69,C70,C74,C75,C77,C78,C79,C80,C82,C83,C85,D10,D11,D5,D6,D7,D8,D9
typical_cds_rare	Chr7	58803428	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	B28,B76
typical_cds_rare	Chr7	58803435	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	C43
typical_cds_rare	Chr7	58803444	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	1	C43
typical_cds_rare	Chr7	58803446	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995177	SmilChr07G004600	130995177	rna-XM_057920330.1	2	C31,C39