source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	59279246	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	C44
typical_cds_rare	Chr7	59279273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	A21
typical_cds_rare	Chr7	59279274	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	B104,B108,B3,B72,C18
typical_cds_rare	Chr7	59279282	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	3	A8,C11,C69
typical_cds_rare	Chr7	59279287	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	2	B124,C85
lof_cds	Chr7	59279290	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	10	A2,A20,B113,B122,B138,B55,B9,C60,C72,C82
lof_cds	Chr7	59279294	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	10	A2,A20,B113,B122,B138,B55,B9,C60,C72,C82
lof_cds	Chr7	59279324	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	14	A21,A25,B110,B123,B131,B41,B51,B52,B54,B59,C22,C4,C74,C85
typical_cds_rare	Chr7	59279358	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	2	B6,C11
typical_cds_rare	Chr7	59279360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	D8
typical_cds_rare	Chr7	59279390	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	B105,B44,B76,B99,C38
lof_cds	Chr7	59279435	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	16	A21,A24,B130,B131,B23,B25,B41,B42,B92,B94,C21,C3,C36,C6,C80,D9
lof_cds	Chr7	59279437	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	18	A19,A20,A3,A7,B111,B123,B29,B40,B60,B68,B70,B79,B90,B92,C16,C18,C49,C6
lof_cds	Chr7	59279441	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	26	A16,A19,A20,A3,B10,B122,B127,B130,B137,B139,B14,B140,B16,B32,B36,B95,C24,C26,C3,C4,C40,C47,C64,C79,C8,D4
typical_cds_rare	Chr7	59279458	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	4	B123,B19,B24,B69
typical_cds_rare	Chr7	59279459	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	4	B2,C34,C51,C70
typical_cds_rare	Chr7	59279517	TTG	*	INDEL	2bp_deletion	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	2	A22,B84
typical_cds_rare	Chr7	59279527	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	B127,B25,B33,B56,B96
typical_cds_rare	Chr7	59279585	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	D1
lof_cds	Chr7	59279605	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	7	A8,B127,C38,C71,D1,D11,D2
typical_cds_rare	Chr7	59279625	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	C64
typical_cds_rare	Chr7	59279627	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	B66
typical_cds_rare	Chr7	59279637	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	2	C8,D2
lof_cds	Chr7	59279659	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	11	B109,B126,B133,B140,B2,B39,B66,B79,C39,C57,C77
lof_cds	Chr7	59279664	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	83	A13,A21,A22,A24,A3,A8,A9,B100,B101,B105,B106,B109,B112,B120,B121,B122,B126,B129,B13,B130,B133,B134,B140,B15,B18,B2,B21,B22,B29,B32,B34,B36,B38,B39,B40,B41,B47,B48,B56,B63,B64,B66,B7,B70,B73,B74,B75,B79,B83,B84,B85,B93,B96,B97,C17,C25,C26,C28,C29,C33,C35,C39,C42,C47,C51,C52,C57,C58,C60,C62,C63,C70,C73,C74,C77,C81,D11,D4,D5,D6,D7,D8,D9
lof_cds	Chr7	59279665	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	B121
typical_cds_rare	Chr7	59279665	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	B121
lof_cds	Chr7	59279666	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	77	A21,A22,A24,A3,A8,A9,B101,B105,B106,B109,B112,B120,B122,B126,B129,B13,B130,B133,B134,B140,B15,B18,B2,B21,B22,B29,B32,B34,B36,B38,B39,B40,B41,B47,B48,B56,B63,B64,B66,B7,B70,B74,B75,B79,B83,B84,B85,B93,B96,B97,C17,C25,C26,C29,C33,C35,C39,C42,C47,C51,C52,C57,C58,C60,C62,C63,C73,C74,C77,C81,D11,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr7	59279673	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	2	B36,D6
typical_cds_rare	Chr7	59279719	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	A10,A7,B82,C21,C4
lof_cds	Chr7	59279721	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	A10,A7,B82,C21,C4
typical_cds_rare	Chr7	59279721	GC	G	INDEL	1bp_deletion	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	A10,A7,B82,C21,C4
typical_cds_rare	Chr7	59279722	CTT	*	INDEL	2bp_deletion	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	A10,A7,B82,C21,C4
lof_cds	Chr7	59279725	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	4	A10,A7,B82,C4
typical_cds_rare	Chr7	59279725	C	CG	INDEL	1bp_insertion	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	4	A10,A7,B82,C4
typical_cds_rare	Chr7	59279731	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	B2,B21,B66,B79,C28
typical_cds_rare	Chr7	59279732	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	2	B21,C28
typical_cds_rare	Chr7	59279774	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	2	B3,C38
typical_cds_rare	Chr7	59279794	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	B3,B50,C25,C33,C38
typical_cds_rare	Chr7	59279819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	A21,B48,C18,C58,C77
typical_cds_rare	Chr7	59279830	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	B104
typical_cds_rare	Chr7	59279875	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	C58
typical_cds_rare	Chr7	59279891	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	B12
lof_cds	Chr7	59279928	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	9	A21,B124,B131,B41,B55,B82,C17,C32,C68
lof_cds	Chr7	59279932	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	8	A21,B124,B131,B41,B55,C17,C32,C68
lof_cds	Chr7	59280058	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	15	B111,B117,B140,B22,B4,B50,B8,B82,B85,B86,B93,C24,C30,C52,C62
lof_cds	Chr7	59280059	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	25	A16,A19,A20,A3,A7,B112,B15,B18,B2,B21,B28,B29,B47,B60,B70,B87,C32,C34,C40,C49,C51,C55,C68,C70,D3
lof_cds	Chr7	59280061	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	42	A16,A19,A20,A3,A7,B111,B112,B117,B140,B15,B18,B2,B21,B22,B28,B29,B4,B41,B47,B50,B60,B70,B8,B82,B85,B86,B87,B93,C24,C30,C32,C34,C40,C49,C51,C52,C55,C62,C68,C70,C86,D3
lof_cds	Chr7	59280076	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	9	B104,B12,B123,B81,C18,C36,C43,C47,C54
lof_cds	Chr7	59280079	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	9	B104,B12,B123,B81,C18,C36,C43,C47,C54
typical_cds_rare	Chr7	59280199	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	3	A24,B41,C62
lof_cds	Chr7	59280233	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	A13,A24,B7,C52,C73
typical_cds_rare	Chr7	59280233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	5	A13,A24,B7,C52,C73
typical_cds_rare	Chr7	59280250	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	2	A8,B84
typical_cds_rare	Chr7	59280253	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	C36
lof_cds	Chr7	59280256	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	8	A14,B28,B37,B46,B47,B57,B60,C55
typical_cds_rare	Chr7	59280273	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	4	B55,C18,C48,C56
typical_cds_rare	Chr7	59280340	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	3	B123,C36,C86
typical_cds_rare	Chr7	59280357	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	1	D3
typical_cds_rare	Chr7	59280423	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	4	B112,B28,C5,D3
typical_cds_rare	Chr7	59280452	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	4	A6,B140,B53,C28
typical_cds_rare	Chr7	59280464	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920352.1,rna-XM_057920354.1	3	B104,B91,D10
lof_cds	Chr7	59281049	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920354.1	3	B138,B22,C49
typical_cds_rare	Chr7	59281049	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130995197	SmilChr07G004643	130995197	rna-XM_057920354.1	3	B138,B22,C49