source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr7	59311134	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	B107,C71
typical_cds_rare	Chr7	59311162	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B107
typical_cds_rare	Chr7	59311179	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B120,B131,B35
lof_cds	Chr7	59311245	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	26	A3,A9,B107,B113,B128,B131,B135,B17,B41,B5,B58,B59,B73,B77,B82,B85,C17,C19,C20,C21,C29,C35,C41,C67,C83,D3
typical_cds_rare	Chr7	59311251	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B17,B55,C82
typical_cds_rare	Chr7	59311319	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	A9,B126,B82
typical_cds_rare	Chr7	59311329	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B93
lof_cds	Chr7	59311341	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	26	A10,A14,A2,A5,A6,A9,B123,B126,B139,B14,B30,B34,B35,B55,B56,B70,B73,B85,B94,B96,C16,C23,C24,C54,C61,C82
typical_cds_rare	Chr7	59311374	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B107,B26,B82
typical_cds_rare	Chr7	59311385	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B139
typical_cds_rare	Chr7	59311410	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	B14,B94,C34,C40
lof_cds	Chr7	59311476	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	57	A22,A3,A7,A8,B100,B101,B102,B105,B108,B109,B110,B114,B117,B123,B129,B130,B131,B138,B139,B30,B33,B44,B47,B49,B58,B61,B62,B69,B71,B76,B77,B85,B86,B87,B91,C10,C16,C17,C18,C25,C28,C3,C34,C4,C51,C57,C62,C68,C70,C72,C73,C75,C76,C85,D10,D3,D6
lof_cds	Chr7	59311483	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	43	A22,A3,A7,B100,B101,B109,B110,B114,B123,B130,B131,B132,B138,B139,B33,B44,B47,B62,B69,B71,B76,B77,B86,B91,C10,C11,C16,C17,C18,C25,C28,C3,C34,C4,C57,C62,C70,C72,C73,C75,D10,D3,D6
lof_cds	Chr7	59311492	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	16	A11,A2,B1,B117,B133,B66,B69,B75,B78,B94,C12,C16,C21,C34,C61,C8
typical_cds_rare	Chr7	59311497	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	B135,C12
typical_cds_rare	Chr7	59311507	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B65
typical_cds_rare	Chr7	59311519	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	A5,C56
typical_cds_rare	Chr7	59311528	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	C40,D9
typical_cds_rare	Chr7	59311539	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	C40,D9
typical_cds_rare	Chr7	59311561	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	5	A23,B1,B114,B69,C58
typical_cds_rare	Chr7	59311579	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	C66,D9
typical_cds_rare	Chr7	59311582	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	A13,B138,C11,C6
typical_cds_rare	Chr7	59311609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	C25,C40,C66,D9
typical_cds_rare	Chr7	59311611	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	A5,B1,C56
typical_cds_rare	Chr7	59311627	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	C25,C40,C66,D9
typical_cds_rare	Chr7	59311628	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B17,B73,C30
typical_cds_rare	Chr7	59311643	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	C76,C87
typical_cds_rare	Chr7	59311653	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	C25,C40,C66,D9
typical_cds_rare	Chr7	59311654	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	C25,C40,C66,D9
typical_cds_rare	Chr7	59311659	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	5	B113,B14,B43,B86,C27
typical_cds_rare	Chr7	59311662	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B35
lof_cds	Chr7	59311682	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	B138,B56,C11,C80
typical_cds_rare	Chr7	59311682	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	B138,B56,C11,C80
typical_cds_rare	Chr7	59311697	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	B111,C35,C45,C77
typical_cds_rare	Chr7	59311716	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	A11,C16
typical_cds_rare	Chr7	59311729	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B4
typical_cds_rare	Chr7	59311735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	B17,B53
typical_cds_rare	Chr7	59311739	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B11,B114,C30
typical_cds_rare	Chr7	59311743	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	C80
typical_cds_rare	Chr7	59311782	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B57
typical_cds_rare	Chr7	59311790	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B26,B80,C60
typical_cds_rare	Chr7	59311803	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	A25,C12,C68
typical_cds_rare	Chr7	59311819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	5	B11,B114,B73,C30,C45
typical_cds_rare	Chr7	59311854	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	A6,B56,B96
lof_cds	Chr7	59311856	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	30	B110,B112,B114,B115,B133,B15,B20,B4,B56,B57,B59,B62,B72,B85,B88,B96,C11,C31,C33,C34,C46,C47,C51,C69,C76,C77,C80,C86,C87,D1
lof_cds	Chr7	59311874	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B120,B56,C52
typical_cds_rare	Chr7	59311874	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B120,B56,C52
typical_cds_rare	Chr7	59311881	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	A7,C42,C5
typical_cds_rare	Chr7	59311918	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	A7,B92,C42,C5
typical_cds_rare	Chr7	59311933	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	5	A23,B1,B114,B69,C58
typical_cds_rare	Chr7	59311946	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B128
lof_cds	Chr7	59311986	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	29	B110,B112,B133,B20,B4,B43,B56,B57,B59,B62,B63,B72,B85,B88,B96,C11,C31,C33,C34,C46,C47,C51,C52,C54,C69,C77,C86,C87,D1
typical_cds_rare	Chr7	59311995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	B53,B71
lof_cds	Chr7	59312016	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B20,C42,C56
typical_cds_rare	Chr7	59312016	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B20,C42,C56
typical_cds_rare	Chr7	59312033	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	C82
lof_cds	Chr7	59312037	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B136,B98,D9
typical_cds_rare	Chr7	59312037	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B136,B98,D9
typical_cds_rare	Chr7	59312042	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B20,B47,C42
typical_cds_rare	Chr7	59312057	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	4	B98,C14,C24,D9
typical_cds_rare	Chr7	59312061	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B42,B43,B63
typical_cds_rare	Chr7	59312073	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	C8
lof_cds	Chr7	59312116	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B99,C2,C56
typical_cds_rare	Chr7	59312116	CG	C	INDEL	1bp_deletion	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B99,C2,C56
lof_cds	Chr7	59312118	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	7	B13,B91,C10,C24,C56,C78,D10
lof_cds	Chr7	59312119	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	20	A23,B102,B113,B122,B24,B33,B41,B55,B63,B87,B88,C20,C23,C35,C40,C45,C51,C74,C77,D6
typical_cds_rare	Chr7	59312124	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	B117,C71
lof_cds	Chr7	59312133	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	D9
typical_cds_rare	Chr7	59312133	T	TA	INDEL	1bp_insertion	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	D9
typical_cds_rare	Chr7	59312135	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	5	B122,B63,B99,C2,C84
typical_cds_rare	Chr7	59312145	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	B91,C62
typical_cds_rare	Chr7	59312159	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B67
typical_cds_rare	Chr7	59312161	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B63
lof_cds	Chr7	59312162	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B55
typical_cds_rare	Chr7	59312162	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	B55
typical_cds_rare	Chr7	59312168	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B102,B63,C2
typical_cds_rare	Chr7	59312175	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B115,B26,D4
typical_cds_rare	Chr7	59312176	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	3	B17,B73,C82
typical_cds_rare	Chr7	59312191	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	2	A20,C12
lof_cds	Chr7	59312274	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	C50
typical_cds_rare	Chr7	59312274	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC130994533	SmilChr07G004648	130994533	rna-XM_057919578.1	1	C50