当前解析结果
SmilChr01G002739| 统一新 Gene ID | SmilChr01G002739 |
|---|---|
| 名称 | SmilChr01G002739 |
| 描述 | serine acetyltransferase 5-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 45707023 - 45710536 / + |
| NCBI Gene ID | LOC130986286 |
|---|---|
| GeneID | 130986286 |
| locus_tag | - |
| NCBI Name | LOC130986286 |
| 原始查询 | LOC130986286 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | serine acetyltransferase 5-like |
| 产物 | serine acetyltransferase 5-like |
| Arabidopsis | AT5G56760 (SERAT1;1)serine acetyltransferase 1;1 [Source:NCBI gene (formerly Entrezgene);Acc:835778] identity=89.5; qcov=0.921; evalue=4.6e-173; confidence=high |
| Rice | Os05g0533500- identity=76.6; qcov=0.969; evalue=1.58e-151; confidence=high |
| GO | GO:0005737 (cytoplasm); GO:0005829 (cytosol); GO:0006535 (GO:0006535); GO:0009001 (L-serine O-acetyltransferase activity) |
| KEGG | smil00270 (Cysteine and methionine metabolism - Salvia miltiorrhiza (redroot sage)); smil00543 (Exopolysaccharide biosynthesis - Salvia miltiorrhiza (redroot sage)); smil00920 (Sulfur metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01200 (Carbon metabolism - Salvia miltiorrhiza (redroot sage)); smil01230 (Biosynthesis of amino acids - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00132 (Hexapep); PF06426 (SATase_N); PF14602 (Hexapep_2) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986286 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.60000 | XP_057765638.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057765638.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057765638.1 |
| 4 | Mitochondrion | 线粒体 | 0.20000 | XP_057765638.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057765638.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057765638.1PF06426
SATase_N 25-129 aa
PF14602
Hexapep_2 176-192 aa
PF00132
Hexapep 209-242 aa
PF14602
Hexapep_2 211-242 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057765638.1 |
Pfam | PF06426 |
SATase_N | Domain | 25 | 129 | 9.7e-34 | 116.6 | Serine acetyltransferase, N-terminal |
XP_057765638.1 |
Pfam | PF14602 |
Hexapep_2 | Repeat | 176 | 192 | 2.8e-07 | 30.9 | Hexapeptide repeat of succinyl-transferase |
XP_057765638.1 |
Pfam | PF00132 |
Hexapep | Repeat | 209 | 242 | 1.1e-14 | 54.1 | Bacterial transferase hexapeptide (six repeats) |
XP_057765638.1 |
Pfam | PF14602 |
Hexapep_2 | Repeat | 211 | 242 | 2.8e-07 | 30.9 | Hexapeptide repeat of succinyl-transferase |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。