当前解析结果
SmilChr01G000051| 统一新 Gene ID | SmilChr01G000051 |
|---|---|
| 名称 | SmilChr01G000051 |
| 描述 | ABC transporter B family member 21-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 823676 - 824792 / - |
| NCBI Gene ID | LOC131007198 |
|---|---|
| GeneID | 131007198 |
| locus_tag | - |
| NCBI Name | LOC131007198 |
| 原始查询 | LOC131007198 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ABC transporter B family member 21-like |
| 产物 | ABC transporter B family member 21-like |
| Arabidopsis | AT5G46540 (ABCB7)P-glycoprotein 7 [Source:NCBI gene (formerly Entrezgene);Acc:834697] identity=33.3; qcov=0.758; evalue=1.35e-07; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007198 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 0.80000 | XP_057790336.1 |
| 2 | Mitochondrion intermembrane space | Mitochondrion intermembrane space | 0.20000 | XP_057790336.1 |
| 3 | Mitochondrion membrane | 线粒体膜 | 0.20000 | XP_057790336.1 |
| 4 | Chloroplast | 叶绿体 | 0.20000 | XP_057790336.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057790336.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:823785 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | A18,C82 |
Chr1:823785 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A18,C82 |
Chr1:823800 |
AAT |
A |
2bp_deletion | frameshift_variant | 85 | A11,A14,A16,A2,A4,B10,B103,B107,B109,B11,B112,B113,B114,B117,B122,B126,B129,B13,B134,B135,B139,B14,B16,B23,B28,B30,B32,B33,B34,B38,B39,B40,B50,B56,B57,B58,B59,B61,B65,B67,B71,B73,B74,B77,B78,B79,B80,B91,B93,B94,B97,B98,C13,C14,C15,C2,C22,C28,C3,C30,C33,C34,C38,C4,C41,C46,C48,C49,C50,C53,C55,C56,C59,C6,C62,C67,C68,C70,C72,C74,C8,C81,C82,C87,D1 |
Chr1:823806 |
T |
TCA |
2bp_insertion | frameshift_variant | 85 | A11,A14,A16,A2,A4,B10,B103,B107,B109,B11,B112,B113,B114,B117,B122,B126,B129,B13,B134,B135,B139,B14,B16,B23,B28,B30,B32,B33,B34,B38,B39,B40,B50,B56,B57,B58,B59,B61,B65,B67,B71,B73,B74,B77,B78,B79,B80,B91,B93,B94,B97,B98,C13,C14,C15,C2,C22,C28,C3,C30,C33,C34,C38,C4,C41,C46,C48,C49,C50,C53,C55,C56,C59,C6,C62,C67,C68,C70,C72,C74,C8,C81,C82,C87,D1 |
Chr1:823807 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | A18,C82 |
Chr1:823807 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A18,C82 |
Chr1:823859 |
GT |
G |
1bp_deletion | frameshift_variant | 12 | A16,A18,A19,A23,B10,B29,B38,B59,C54,C74,D11,D4 |
Chr1:823885 |
CA |
C |
1bp_deletion | frameshift_variant | 15 | B124,B4,B56,B59,B73,B86,B94,B98,C15,C38,C6,C72,C86,C87,D8 |
Chr1:823892 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:824070 |
TA |
T |
1bp_deletion | frameshift_variant | 4 | B121,B25,C65,C69 |
Chr1:824070 |
TA |
T |
1bp_deletion | CDS_variant | 4 | B121,B25,C65,C69 |
Chr1:824237 |
T |
TGA |
2bp_insertion | frameshift_variant | 138 | A13,A15,A18,A19,A2,A21,A22,A24,A25,A3,A5,A6,A8,B104,B106,B11,B110,B112,B113,B114,B115,B118,B121,B13,B132,B136,B15,B16,B17,B19,B2,B21,B24,B25,B26,B28,B29,B3,B32,B33,B36,B38,B4,B44,B45,B46,B47,B49,B5,B53,B54,B55,B56,B58,B59,B6,B60,B61,B62,B63,B64,B66,B69,B70,B71,B72,B73,B74,B77,B8,B80,B81,B82,B83,B84,B87,B88,B9,B90,B91,B92,B94,B95,B98,C11,C12,C13,C17,C18,C2,C21,C24,C26,C27,C28,C29,C3,C30,C32,C35,C4,C40,C41,C42,C45,C47,C49,C50,C51,C52,C53,C55,C58,C6,C60,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C72,C78,C79,C80,C81,C84,C85,C86,C9,D1,D11,D2,D4 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。