当前解析结果
SmilChr02G004650| 统一新 Gene ID | SmilChr02G004650 |
|---|---|
| 名称 | SmilChr02G004650 |
| 描述 | diacylglycerol kinase 2 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 68928879 - 68935129 / + |
| NCBI Gene ID | LOC131008644 |
|---|---|
| GeneID | 131008644 |
| locus_tag | - |
| NCBI Name | LOC131008644 |
| 原始查询 | LOC131008644 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | diacylglycerol kinase 2 |
| 产物 | diacylglycerol kinase 2 |
| Arabidopsis | AT5G63770 (DGK2)diacylglycerol kinase 2 [Source:NCBI gene (formerly Entrezgene);Acc:836497] identity=67.3; qcov=1.01; evalue=0; confidence=high |
| Rice | Os12g0576900- identity=46.8; qcov=0.999; evalue=0; confidence=high |
| GO | GO:0004143 (ATP-dependent diacylglycerol kinase activity); GO:0007205 (GO:0007205) |
| KEGG | smil00561 (Glycerolipid metabolism - Salvia miltiorrhiza (redroot sage)); smil00564 (Glycerophospholipid metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil04070 (Phosphatidylinositol signaling system - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00130 (C1_1); PF00609 (DAGK_acc); PF00781 (DAGK_cat) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008644 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057791576.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057791576.1 |
| 3 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057791576.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057791576.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057791576.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:68929898 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:68929904 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C80,C81 |
Chr2:68930162 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A10,B120,B77,C48 |
Chr2:68930735 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C47 |
Chr2:68930870 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B67 |
Chr2:68932174 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B25 |
Chr2:68932431 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B117,B12,B76,C61 |
Chr2:68932446 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B93,D10,D11 |
Chr2:68933071 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C13,C41 |
Chr2:68933729 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A11,A3,B107,C73 |
Chr2:68934558 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A10,B120,B77,C48 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057791576.1PF00130
C1_1 146-206 aa
PF00781
DAGK_cat 341-441 aa
PF00609
DAGK_acc 490-647 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057791576.1 |
Pfam | PF00130 |
C1_1 | Domain | 146 | 206 | 3.6e-11 | 43.4 | Phorbol esters/diacylglycerol binding domain (C1 domain) |
XP_057791576.1 |
Pfam | PF00781 |
DAGK_cat | Family | 341 | 441 | 4e-25 | 88.6 | Diacylglycerol kinase catalytic domain |
XP_057791576.1 |
Pfam | PF00609 |
DAGK_acc | Family | 490 | 647 | 6.1e-59 | 199.6 | Diacylglycerol kinase accessory domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。