Red Sage Omics Salvia miltiorrhiza reference portal
Home Gene Search ID Map Annotation Domains Pfam Tools PPI Subcellular Expression Co-expression Homology GO/KEGG TFBS TF Targets EMS Variants JBrowse BLAST Download About Help
Data
ID Map Annotation Functional Search Specialized Metabolism Literature Evidence Domains Pfam Homology
Tools
Genome Tools Primer Design HR Primer Design Translate BLAST PPI Subcellular Co-expression GO/KEGG Functional Search
Regulation
TFBS TF Targets EMS Variants
Help
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This release contains eight nuclear chromosomes. Gene, sequence, annotation and BLAST data share the same public scope.

Red Sage Reference Downloads

Downloads include the Salvia miltiorrhiza reference genome, annotation files, and derived website indexes.

Example entries

ID map SmilChr01G000001 LOC131007145 131007145 XP_057790285.1
File type Description Size Status Download
Genome FASTA Red Sage reference genome DNA sequence 479.4 MB Available GZIP Original format
Genome annotation GFF/GFF3 Gene structure annotation 200.9 MB Available GZIP Original format
cDNA FASTA reconstructed from reference transcript exons and genome Reconstructed from reference transcript exons and nuclear genome 105.3 MB Available GZIP Original format
CDS FASTA Red Sage coding sequences 62.6 MB Available GZIP Original format
Protein FASTA Red Sage protein sequences 22.0 MB Available GZIP Original format
Gene ID mapping Standard ID and NCBI ID mapping table 10.8 MB Available GZIP Original format
Literature sequence evidence Reviewed article accessions, current gene IDs, and alignment evidence 62.3 KB Available GZIP Original format