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Red Sage Specialized Metabolism

This page contains only manually reviewed literature-name mappings traceable to current Gene Cards. Entries support candidate discovery and literature navigation; they are not a complete pathway catalogue or new experimental validation.

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All (9) Tanshinone / Diterpene (7) Phenolic acids (4)

Manually Reviewed Candidate Genes

Literature name Standard Gene ID Topic Functional summary Mapping evidence Confidence Paper IDs
SmMYB36 SmilChr01G002296 tanshinone, phenolic Regulates tanshinone and phenolic acid biosynthesis; affects metabolic flux. BLASTN/BLASTX against website CDS/protein; 97.37% nucleotide identity, 100% query coverage high P02_SmMYB36_tanshinones;P03_SmMYB36_SmERF6_SmERF115;P04_SmCSN5_SmMYB36;P05_SmMYC2_SmMYB36
SmbHLH60 SmilChr03G002799 phenolic Regulates phenolic acids and anthocyanins; antagonistic relationship with SmMYC2. BLASTP against website protein; top hit 65.63% identity, 99% query coverage medium P08_SmbHLH60_SmMYC2
SmCPS1 SmilChr03G004237 tanshinone Copalyl diphosphate synthase involved in tanshinone/diterpene biosynthesis; CRISPR mutagenesis target. Website function annotation keyword: copalyl diphosphate synthase CPS1, chloroplastic high P12_genome_known_tanshinone_genes;P13_CRISPR_SmCPS1
SmERF1b-like SmilChr04G002817 tanshinone Regulates tanshinone biosynthesis. BLASTN/BLASTX against website CDS/protein; 97.41% nucleotide identity, 100% query coverage high P09_SmERF1b_like_tanshinone
SmWRKY2 SmilChr05G001395 tanshinone Critical regulator of JA-induced tanshinone accumulation. Website function annotation keyword: probable WRKY transcription factor 2 medium-high P16_SmCPK20_SmWRKY2
SmMYB1 SmilChr07G001428 phenolic Promotes phenolic acid biosynthesis, partly through CYP98A14 activation. BLASTX partial MYB-domain hit; 79.65% identity, 53% query coverage medium-low P06_SmMYB1_phenolic_acids
SmDXS2 SmilChr08G001984 tanshinone MEP-pathway gene associated with tanshinone biosynthesis regulation. Website function annotation keyword: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic medium P02_SmMYB36_tanshinones;P03_SmMYB36_SmERF6_SmERF115
SmMYC2 SmilChr08G002720 tanshinone, phenolic JA-responsive regulator of tanshinone/phenolic-acid pathway genes. BLASTX top hit to bHLH/MYC-like protein; 32.8% identity, 86% query coverage low P05_SmMYC2_SmMYB36;P06_SmMYB1_phenolic_acids;P08_SmbHLH60_SmMYC2
SmCPK20 SmilChr08G003751 tanshinone Phosphorylates SmWRKY2 to regulate JA-mediated tanshinone synthesis. Website function annotation keyword: calcium-dependent protein kinase 20-like medium-high P16_SmCPK20_SmWRKY2