当前解析结果
SmilChr05G000333| 统一新 Gene ID | SmilChr05G000333 |
|---|---|
| 名称 | SmilChr05G000333 |
| 描述 | uncharacterized SmilChr05G000333 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 2478314 - 2481199 / - |
| NCBI Gene ID | LOC130985053 |
|---|---|
| GeneID | 130985053 |
| locus_tag | - |
| NCBI Name | LOC130985053 |
| 原始查询 | LOC130985053 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | forkhead-associated domain protein [Source:NCBI gene (formerly Entrezgene);Acc:837162]; symbol=AT1G06510; hit=AT1G06510; species=arabidopsis; confidence=high |
| 产物 | forkhead-associated domain protein [Source:NCBI gene (formerly Entrezgene);Acc:837162]; symbol=AT1G06510; hit=AT1G06510; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G06510 (AT1G06510)forkhead-associated domain protein [Source:NCBI gene (formerly Entrezgene);Acc:837162] identity=45.7; qcov=0.989; evalue=1.26e-68; confidence=high |
| Rice | Os01g0696000- identity=35.3; qcov=0.89; evalue=9e-32; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985053 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057763804.1 |
| 2 | Chloroplast membrane | 叶绿体膜 | 0.20000 | XP_057763804.1 |
| 3 | Chloroplast stroma | 叶绿体基质 | 0.20000 | XP_057763804.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057763804.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057763804.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:2479198 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B95,C4 |
Chr5:2479365 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr5:2480386 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B122,B47 |
Chr5:2480399 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A14,B127,B53,C39 |
Chr5:2480440 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B85,D11 |
Chr5:2480983 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A7,B112,B23,B78,B94 |
Chr5:2481035 |
TAC |
T |
2bp_deletion | frameshift_variant | 1 | C4 |
Chr5:2481035 |
TAC |
T |
2bp_deletion | CDS_variant | 1 | C4 |
Chr5:2481095 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A7,B23,B78,B94 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
6 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。