当前解析结果
SmilChr05G000415| 统一新 Gene ID | SmilChr05G000415 |
|---|---|
| 名称 | SmilChr05G000415 |
| 描述 | uncharacterized SmilChr05G000415 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 3137229 - 3139173 / - |
| NCBI Gene ID | LOC130985133 |
|---|---|
| GeneID | 130985133 |
| locus_tag | - |
| NCBI Name | LOC130985133 |
| 原始查询 | LOC130985133 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817783]; symbol=AT2G32235; hit=AT2G32235; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817783]; symbol=AT2G32235; hit=AT2G32235; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G32235 (AT2G32235)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:817783] identity=37.4; qcov=0.392; evalue=4.21e-11; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985133 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057763919.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057763919.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057763919.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057763919.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057763919.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:3137535 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B124,C23,C81 |
Chr5:3137577 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B109 |
Chr5:3137585 |
C |
CAA |
2bp_insertion | frameshift_variant | 17 | B1,B127,B130,B22,B36,B65,B71,C1,C34,C44,C5,C57,C64,C66,C72,C77,C8 |
Chr5:3137613 |
A |
AC |
1bp_insertion | frameshift_variant | 7 | A2,B100,B125,B26,B90,B92,C83 |
Chr5:3137621 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B13,B31,B97,C60 |
Chr5:3137647 |
TTC |
T |
2bp_deletion | frameshift_variant | 18 | B10,B110,B125,B128,B129,B132,B17,B22,B28,B34,B82,B83,B86,B91,C21,C36,C55,D9 |
Chr5:3137652 |
AC |
A |
1bp_deletion | frameshift_variant | 23 | B10,B110,B125,B128,B129,B130,B132,B17,B22,B28,B34,B36,B71,B82,B83,B86,B91,C21,C34,C36,C44,C55,D9 |
Chr5:3137654 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B130,B36,B71,C34,C44 |
Chr5:3138316 |
C |
CA |
1bp_insertion | frameshift_variant | 17 | A14,A20,A22,B101,B18,B22,B48,B6,B7,B73,B80,B9,C1,C42,C45,C59,C67 |
Chr5:3138340 |
CG |
C |
1bp_deletion | frameshift_variant | 44 | A11,A2,A23,A3,B10,B100,B125,B129,B132,B133,B134,B14,B17,B19,B2,B20,B26,B28,B29,B30,B33,B34,B4,B44,B46,B49,B7,B70,B78,B85,B87,C16,C18,C25,C30,C43,C59,C61,C71,C79,C82,C85,D1,D10 |
Chr5:3138342 |
TCG |
T |
2bp_deletion | frameshift_variant | 40 | A11,A2,A23,A3,B10,B100,B125,B129,B132,B133,B134,B14,B17,B19,B2,B20,B26,B28,B29,B30,B33,B34,B4,B44,B49,B7,B70,B78,B85,C16,C18,C25,C30,C43,C59,C61,C79,C82,C85,D10 |
Chr5:3138343 |
CG |
C |
1bp_deletion | frameshift_variant | 40 | A13,A24,A3,A4,A6,A9,B115,B119,B132,B16,B26,B36,B41,B44,B47,B48,B5,B69,B74,B88,B90,C11,C17,C2,C27,C32,C37,C45,C46,C48,C49,C52,C65,C68,C75,C79,D10,D3,D7,D9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。