当前解析结果
SmilChr05G000428| 统一新 Gene ID | SmilChr05G000428 |
|---|---|
| 名称 | SmilChr05G000428 |
| 描述 | uncharacterized SmilChr05G000428 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 3219624 - 3221114 / + |
| NCBI Gene ID | LOC130985150 |
|---|---|
| GeneID | 130985150 |
| locus_tag | - |
| NCBI Name | LOC130985150 |
| 原始查询 | LOC130985150 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:825662]; symbol=AT4G03620; hit=AT4G03620; species=arabidopsis; confidence=medium |
| 产物 | myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:825662]; symbol=AT4G03620; hit=AT4G03620; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G03620 (AT4G03620)myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:825662] identity=39.8; qcov=1.04; evalue=3.47e-61; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985150 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057763938.1 |
| 2 | Nucleus membrane | 核膜 | 0.20000 | XP_057763938.1 |
| 3 | Cytoskeleton | 细胞骨架 | 0.20000 | XP_057763938.1 |
| 4 | Cytosol | 细胞质基质 | 0.20000 | XP_057763938.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057763938.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:3220061 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A19,B58 |
Chr5:3220129 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B130,B14 |
Chr5:3220229 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A3 |
Chr5:3220234 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B56,B96 |
Chr5:3220273 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr5:3220309 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A3,B115,C35,D6 |
Chr5:3220396 |
GAA |
G |
2bp_deletion | frameshift_variant | 1 | B35 |
Chr5:3220396 |
GAA |
G |
2bp_deletion | CDS_variant | 1 | B35 |
Chr5:3220445 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C80 |
Chr5:3220747 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B22,B91,C19,C20,D10 |
Chr5:3220772 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B78,C11,C33,C69 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。