Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G000499`

染色体: Chr05 坐标: 3900105-4820659 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G000499`
名称	SmilChr05G000499
描述	uncharacterized SmilChr05G000499
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	3900105 - 4820659 / `+`

ID 对照

NCBI Gene ID	`LOC130985259`
GeneID	`130985259`
locus_tag	`-`
NCBI Name	`LOC130985259`
原始查询	`LOC130985259`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	dihydroorotate dehydrogenase (DUF3598) [Source:NCBI gene (formerly Entrezgene);Acc:819085]; symbol=AT2G44760; hit=AT2G44760; species=arabidopsis; confidence=high
产物	dihydroorotate dehydrogenase (DUF3598) [Source:NCBI gene (formerly Entrezgene);Acc:819085]; symbol=AT2G44760; hit=AT2G44760; species=arabidopsis; confidence=high
Arabidopsis	`AT2G44760` (AT2G44760) dihydroorotate dehydrogenase (DUF3598) [Source:NCBI gene (formerly Entrezgene);Acc:819085] identity=59.9; qcov=1.06; evalue=0; confidence=high
Rice	`Os04g0545200` (OSJNBb0038F03.15) - identity=57.9; qcov=0.879; evalue=1.89e-177; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130985259

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057764114.1`
2	Chloroplast stroma	叶绿体基质	0.80000	`XP_057764116.1`
3	Nucleus	细胞核	0.00000	`XP_057764114.1`
4	Chromosome	染色体	0.00000	`XP_057764114.1`
5	Centromere	着丝粒	0.00000	`XP_057764114.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:3901132`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B37,B5
`Chr5:3901135`	`CG`	`C`	1bp_deletion	frameshift_variant	1	B5
`Chr5:3901135`	`CG`	`C`	1bp_deletion	CDS_variant	1	B5
`Chr5:3901153`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B66,C14,D6
`Chr5:3901224`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A20,B115,B138,B98,C17
`Chr5:3901291`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C29
`Chr5:3901308`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C20
`Chr5:3901343`	`GT`	`G`	1bp_deletion	frameshift_variant	1	C1
`Chr5:3901343`	`GT`	`G`	1bp_deletion	CDS_variant	1	C1
`Chr5:3901345`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C1
`Chr5:3901510`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B49
`Chr5:3902506`	`T`	`TA`	1bp_insertion	frameshift_variant	23	A21,A4,A8,B106,B113,B121,B124,B137,B35,B38,B39,B82,B87,B88,B95,C20,C22,C32,C46,C58,C6,C68,D9

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XR_009088929.1
AGGCCATTCACTCTTTTCTTCTTCTTTTTTGCTCAAACTCTTTTCTTCTTCACTCACGCTCTCATTCTCTCTCATTCGTCTCTCTCACTGCTACCCAACACCAAACAGAAAACTCTGCTGTTTCTCCCACTGATTTCTCCACCTCAATCAGGACTACTAGTACAGCTGCTATCCTTATCCTTTTCTTTGTCCGAACATCAATTCAAGTTGTTCCTTCTGAAATTGGGGCGCGACATTTCAAGGAAAGTGACGCGAAACAC...

XR_009088928.1
AACTCTTTTCTTCTTCACTCACGCTCTCATTCTCTCTCATTCGTCTCTCTCACTGCTACCCAACACCAAACAGAAAACTCTGCTGTTTCTCCCACTGATTTCTCCACCTCAATCAGGACTACTAGTACAGCTGCTATCCTTATCCTTTTCTTTGTCCGAACATCAATTCAAGTTGTTCCTTCTGAAATTGGGGCGCGACATTTCAAGGAAAGGTATTTATGGAAGATAATTTTGCCTGGCATTTCTTTTTACGGTGAAGA...

CDS

4 records

下载 CDS FASTA

LOC130985259
ATGATGCAATCACCATGCATAGATGCTTGCAAAGCCTTCGGAAGTAGCGGCTTCTTCCTGAAAGGCTTCCAAAAACAGCAGCAGTTACTCGCGAATAATCTCGACGGTCGATCTGTTTCATCTTCTCCAACGCATAGGTACGGTTATCCCTGTATTTCGTGCAAATTTGAAGACAAAAGTTACCGCCTTGTTAACGTCCGGGGAAGGCCGAGGGAGGATTTTGAGGTTAGTTGTTGGAGAGGGAAAGTGGGGGCCAAGGG...

Protein

4 records

下载 Protein FASTA

XP_057764114.1
MMQSPCIDACKAFGSSGFFLKGFQKQQQLLANNLDGRSVSSSPTHRYGYPCISCKFEDKSYRLVNVRGRPREDFEVSCWRGKVGAKGKDNVWSIDNEMSKAEKEKGRTRRRKRGGKRVRNVYQKGDRVLVSSSMLMEVETILQMQEPVIRPAWHTFVSSVSGIWKGVGAVYSPITAEMEPIEIGSKNENLFDCYTLSHIKALPSTSGALNSQIQRKINWVTLNPYGESQNNKGSLIYKKPDASFAMKETSDRVSAGPNLP...

XP_057764115.1
MMQSPCIDACKAFGSSGFFLKGFQKQQQLLANNLDGRSVSSSPTHRYGYPCISCKFEDKSYRLVNVRGRPREDFEVSCWRGKVGAKGKDNVWSIDNEMSKAEKEKGRTRRRKRGGKRVRNVYQKGDRVLVSSSMLMEVETILQMQEPVIRPAWHTFVSSVSGIWKGVGAVYSPITAEMEPIEIGSKNENLFDCYTLSHIKALPSTSGALNSQIQRKINWVTLNPYGESQNNKGSLIYKKPDASFAMKETSDRVSAGPNLP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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