当前解析结果
SmilChr05G000632| 统一新 Gene ID | SmilChr05G000632 |
|---|---|
| 名称 | SmilChr05G000632 |
| 描述 | uncharacterized SmilChr05G000632 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 4771763 - 4776569 / - |
| NCBI Gene ID | LOC130985308 |
|---|---|
| GeneID | 130985308 |
| locus_tag | - |
| NCBI Name | LOC130985308 |
| 原始查询 | LOC130985308 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818325]; symbol=AT2G37480; hit=AT2G37480; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818325]; symbol=AT2G37480; hit=AT2G37480; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G37480 (AT2G37480)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:818325] identity=30.9; qcov=0.54; evalue=5.06e-11; confidence=low |
| Rice | Os05g0113500 (BIP130)- identity=40.8; qcov=0.237; evalue=4.49e-07; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985308 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057764206.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057764206.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057764206.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057764206.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057764206.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:4771833 |
C |
T |
EMS_canonical_SNV | stop_gained | 56 | A10,A13,A15,A20,A22,A23,A3,B1,B101,B103,B106,B110,B115,B117,B125,B129,B131,B139,B17,B25,B42,B43,B46,B47,B55,B58,B59,B62,B63,B7,B76,B83,B95,C11,C13,C17,C21,C22,C27,C28,C31,C38,C43,C45,C49,C52,C56,C57,C69,C70,C71,C76,C81,C83,C84,D2 |
Chr5:4771839 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C64,C66 |
Chr5:4771896 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B13,B40,D11 |
Chr5:4775100 |
TGA |
T |
2bp_deletion | frameshift_variant | 4 | B104,B29,B72,C79 |
Chr5:4775100 |
TGA |
T |
2bp_deletion | CDS_variant | 4 | B104,B29,B72,C79 |
Chr5:4775633 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C60 |
Chr5:4775691 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:4775721 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr5:4775938 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B124,B30,B86,C34,C54 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。