当前解析结果
SmilChr05G000790| 统一新 Gene ID | SmilChr05G000790 |
|---|---|
| 名称 | SmilChr05G000790 |
| 描述 | uncharacterized SmilChr05G000790 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 6176468 - 6177383 / - |
| NCBI Gene ID | LOC130985505 |
|---|---|
| GeneID | 130985505 |
| locus_tag | - |
| NCBI Name | LOC130985505 |
| 原始查询 | LOC130985505 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Pollen Ole e 1 allergen and extensin family protein [Source:NCBI gene (formerly Entrezgene);Acc:818035]; symbol=AT2G34700; hit=AT2G34700; species=arabidopsis; confidence=low |
| 产物 | Pollen Ole e 1 allergen and extensin family protein [Source:NCBI gene (formerly Entrezgene);Acc:818035]; symbol=AT2G34700; hit=AT2G34700; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G34700 (AT2G34700)Pollen Ole e 1 allergen and extensin family protein [Source:NCBI gene (formerly Entrezgene);Acc:818035] identity=30.8; qcov=1.03; evalue=2.22e-08; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985505 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Secreted | 分泌到胞外 | 1.00000 | XP_057764487.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057764487.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057764487.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057764487.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057764487.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:6176772 |
TG |
T |
1bp_deletion | frameshift_variant | 2 | B93,C82 |
Chr5:6176772 |
TG |
T |
1bp_deletion | CDS_variant | 2 | B93,C82 |
Chr5:6176823 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B103,B122,C24,C49 |
Chr5:6176848 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr5:6176889 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A16,B131,C21,C31,C51 |
Chr5:6176896 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A16,B131,C21,C31,C51 |
Chr5:6176897 |
T |
TGC |
2bp_insertion | frameshift_variant | 1 | B131 |
Chr5:6176897 |
T |
TGC |
2bp_insertion | CDS_variant | 1 | B131 |
Chr5:6176924 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B13,D4 |
Chr5:6177048 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B103,B122,C24,C49 |
Chr5:6177068 |
G |
GC |
1bp_insertion | frameshift_variant | 8 | B11,B22,B4,B59,C30,C4,C52,C76 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。