当前解析结果
SmilChr05G000936| 统一新 Gene ID | SmilChr05G000936 |
|---|---|
| 名称 | SmilChr05G000936 |
| 描述 | uncharacterized SmilChr05G000936 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 7505021 - 7507782 / - |
| NCBI Gene ID | LOC130985652 |
|---|---|
| GeneID | 130985652 |
| locus_tag | - |
| NCBI Name | LOC130985652 |
| 原始查询 | LOC130985652 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434]; symbol=AT1G51172; hit=AT1G51172; species=arabidopsis; confidence=weak |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434]; symbol=AT1G51172; hit=AT1G51172; species=arabidopsis; confidence=weak |
| Arabidopsis | AT1G51172 (AT1G51172)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434] identity=22; qcov=0.68; evalue=3.26e-10; confidence=weak |
| Rice | Os02g0307900- identity=23.7; qcov=0.355; evalue=1.94e-08; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985652 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057764708.1 |
| 2 | Nucleoplasm | 核质 | 0.20000 | XP_057764708.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057764708.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057764708.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057764708.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:7505030 |
ACT |
A |
2bp_deletion | frameshift_variant | 15 | A19,A9,B109,B117,B123,B126,B74,B83,B93,C39,C4,C57,C79,C82,C85 |
Chr5:7505035 |
A |
AAC |
2bp_insertion | frameshift_variant | 1 | B75 |
Chr5:7505035 |
A |
AAC |
2bp_insertion | CDS_variant | 1 | B75 |
Chr5:7505040 |
C |
CAG |
2bp_insertion | frameshift_variant | 11 | A19,B109,B123,B126,B74,B83,C4,C57,C79,C82,C85 |
Chr5:7505041 |
CAT |
C |
2bp_deletion | frameshift_variant | 11 | A19,B109,B123,B126,B74,B83,C4,C57,C79,C82,C85 |
Chr5:7505057 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A14,A5,B84 |
Chr5:7505086 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A14,B10 |
Chr5:7505089 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A9,B73,B75,C18,C2 |
Chr5:7505094 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr5:7505095 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B9 |
Chr5:7505096 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A8,B107,B35,B77,C84 |
Chr5:7505098 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B105,B134,B37 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。