当前解析结果
SmilChr05G001008| 统一新 Gene ID | SmilChr05G001008 |
|---|---|
| 名称 | SmilChr05G001008 |
| 描述 | uncharacterized SmilChr05G001008 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 8280302 - 8283696 / - |
| NCBI Gene ID | LOC130985722 |
|---|---|
| GeneID | 130985722 |
| locus_tag | - |
| NCBI Name | LOC130985722 |
| 原始查询 | LOC130985722 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc finger protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:835552]; symbol=AT5G54630; hit=AT5G54630; species=arabidopsis; confidence=high |
| 产物 | zinc finger protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:835552]; symbol=AT5G54630; hit=AT5G54630; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G54630 (AT5G54630)zinc finger protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:835552] identity=53.6; qcov=1.23; evalue=1.93e-151; confidence=high |
| Rice | Os06g0683000- identity=46.5; qcov=1.15; evalue=2.46e-114; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130985722 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057764796.1 |
| 2 | Cell membrane | 细胞膜 | 0.60000 | XP_057764796.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057764796.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057764796.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057764796.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:8280825 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B38,B39 |
Chr5:8280839 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C86 |
Chr5:8280936 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr5:8281255 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B115,B81 |
Chr5:8281304 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B128,B38,B39 |
Chr5:8281427 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B38,B39 |
Chr5:8281484 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B49,B99,C87 |
Chr5:8281486 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B131,B8,C13,C44 |
Chr5:8281499 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
Chr5:8281582 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B93,C41,C5 |
Chr5:8281588 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B109 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。