Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G001095`

染色体: Chr05 坐标: 9118392-9121668 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G001095`
名称	SmilChr05G001095
描述	lactoylglutathione lyase GLX1
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	9118392 - 9121668 / `-`

ID 对照

NCBI Gene ID	`LOC130985802`
GeneID	`130985802`
locus_tag	`-`
NCBI Name	`LOC130985802`
原始查询	`LOC130985802`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	lactoylglutathione lyase GLX1
产物	lactoylglutathione lyase GLX1
Arabidopsis	`AT1G11840` (GLX1) glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:837731] identity=82.9; qcov=0.949; evalue=1.21e-178; confidence=high
Rice	`Os08g0191700` (GLYI-11) lactoylglutathione lyase-like [Source:NCBI gene (formerly Entrezgene);Acc:4344858] identity=79.4; qcov=0.986; evalue=2.7e-174; confidence=high
GO	GO:0004462 (lactoylglutathione lyase activity); GO:0005737 (cytoplasm); GO:0019243 (GO:0019243); GO:0046872 (metal ion binding)
KEGG	smil00620 (Pyruvate metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage))
Pfam	PF00903 (Glyoxalase); PF13669 (Glyoxalase_4)
InterPro	-
eggNOG	-
NR	GeneID:130985802

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057764906.1`
2	Cytoplasm	细胞质	1.00000	`XP_057764907.1`
3	Flagellum	鞭毛	0.20000	`XP_057764907.1`
4	Nucleus	细胞核	0.00000	`XP_057764906.1`
5	Chromosome	染色体	0.00000	`XP_057764906.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:9119083`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B12,B24
`Chr5:9119164`	`C`	`T`	EMS_canonical_SNV	stop_gained	46	A14,A18,A23,A25,B100,B101,B103,B105,B115,B118,B121,B127,B133,B16,B28,B33,B44,B5,B54,B64,B69,B70,B83,B93,B98,C10,C12,C14,C24,C26,C30,C32,C33,C36,C45,C46,C47,C55,C68,C71,C75,C82,C84,C86,C87,D2
`Chr5:9119224`	`CA`	`C`	1bp_deletion	frameshift_variant	1	B104
`Chr5:9119224`	`CA`	`C`	1bp_deletion	CDS_variant	1	B104
`Chr5:9119837`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B12,B24
`Chr5:9119969`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B75,C85,D3
`Chr5:9120191`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B75,C85,D3
`Chr5:9120724`	`TGA`	`T`	2bp_deletion	frameshift_variant	1	B121
`Chr5:9120724`	`TGA`	`T`	2bp_deletion	CDS_variant	1	B121
`Chr5:9120744`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A20,B125,B128,B77
`Chr5:9120924`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B37,C35

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057764906.1

312 aa

156

312

Glyoxalase

Glyoxalase_4

Glyoxalase

PF00903 Glyoxalase 24-145 aa PF13669 Glyoxalase_4 27-134 aa PF00903 Glyoxalase 157-305 aa

XP_057764907.1

295 aa

148

295

Glyoxalase

Glyoxalase_4

Glyoxalase

PF00903 Glyoxalase 24-145 aa PF13669 Glyoxalase_4 27-134 aa PF00903 Glyoxalase 157-276 aa

XP_057764908.1

295 aa

148

295

Glyoxalase

Glyoxalase_4

Glyoxalase

PF00903 Glyoxalase 24-145 aa PF13669 Glyoxalase_4 27-134 aa PF00903 Glyoxalase 157-276 aa

XP_057764909.1

295 aa

148

295

Glyoxalase

Glyoxalase_4

Glyoxalase

PF00903 Glyoxalase 24-145 aa PF13669 Glyoxalase_4 27-134 aa PF00903 Glyoxalase 157-276 aa

XP_057764911.1

295 aa

148

295

Glyoxalase

Glyoxalase_4

Glyoxalase

PF00903 Glyoxalase 24-145 aa PF13669 Glyoxalase_4 27-134 aa PF00903 Glyoxalase 157-276 aa

XP_057764912.1

295 aa

148

295

Glyoxalase

Glyoxalase_4

Glyoxalase

PF00903 Glyoxalase 24-145 aa PF13669 Glyoxalase_4 27-134 aa PF00903 Glyoxalase 157-276 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057764906.1`	Pfam	`PF00903`	Glyoxalase	Domain	24	145	7.7e-46	156.1	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764906.1`	Pfam	`PF13669`	Glyoxalase_4	Family	27	134	3.9e-13	50.4	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764906.1`	Pfam	`PF00903`	Glyoxalase	Domain	157	305	7.7e-46	156.1	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764907.1`	Pfam	`PF00903`	Glyoxalase	Domain	24	145	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764907.1`	Pfam	`PF13669`	Glyoxalase_4	Family	27	134	1.1e-14	55.3	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764907.1`	Pfam	`PF00903`	Glyoxalase	Domain	157	276	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764908.1`	Pfam	`PF00903`	Glyoxalase	Domain	24	145	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764908.1`	Pfam	`PF13669`	Glyoxalase_4	Family	27	134	1.1e-14	55.3	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764908.1`	Pfam	`PF00903`	Glyoxalase	Domain	157	276	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764909.1`	Pfam	`PF00903`	Glyoxalase	Domain	24	145	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764909.1`	Pfam	`PF13669`	Glyoxalase_4	Family	27	134	1.1e-14	55.3	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764909.1`	Pfam	`PF00903`	Glyoxalase	Domain	157	276	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764911.1`	Pfam	`PF00903`	Glyoxalase	Domain	24	145	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764911.1`	Pfam	`PF13669`	Glyoxalase_4	Family	27	134	1.1e-14	55.3	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764911.1`	Pfam	`PF00903`	Glyoxalase	Domain	157	276	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764912.1`	Pfam	`PF00903`	Glyoxalase	Domain	24	145	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764912.1`	Pfam	`PF13669`	Glyoxalase_4	Family	27	134	1.1e-14	55.3	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
`XP_057764912.1`	Pfam	`PF00903`	Glyoxalase	Domain	157	276	5e-48	163.2	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

6 records

下载 cDNA FASTA

XM_057908924.1
AGTATTATGTTGGACCAAGGACCAATCCAAGACCTAGATCCGACCCATTATATCTCCAACTCCAAATCGTTAAACACACTGTATATATGAGTGACTTAAATCACTGAGTAGTAGAATCAGCTAGAGTGTATCTAGACATCTATCCAGATTGTTCGCAGATCATCTACTCAGATCAATGGCTGAGGGAGCAACCCCTGTTGTACCGAGTACTGAACTATTGGAATGGCCAAAGAAAGATAAGCGCCGATTCCTACACGCGG...

XM_057908923.1
GGACCAAGGACCAATCCAAGACCTAGATCCGACCCATTATATCTCCAACTCCAAATCGTTAAACACACTGTATATATGAGTGACTTAAATCACTGAGTAGTAGAATCAGCTAGAGTGTATCTAGACATCTATCCAGATTGTTCGCAGATCATCTACTCAGATCAATGGCTGAGGGAGCAACCCCTGTTGTACCGAGTACTGAACTATTGGAATGGCCAAAGAAAGATAAGCGCCGATTCCTACACGCGGTTTATCGAGTG...

CDS

6 records

下载 CDS FASTA

LOC130985802
ATGGCTGAGGGAGCAACCCCTGTTGTACCGAGTACTGAACTATTGGAATGGCCAAAGAAAGATAAGCGCCGATTCCTACACGCGGTTTATCGAGTGGGAGACCTCGACCGTACCATCAAGTTCTACACAGAATGTTTTGGGATGAAGCTGTTGCGGAAAAGGGATATCCCAGAAGAGAAATATGCCAATGCTTTTCTTGGGTTTGGACCTGAAGACTCTCAGTTTGTGGTTGAATTGACTTACAACTATGGAGTCGACAA...

Protein

6 records

下载 Protein FASTA

XP_057764906.1
MAEGATPVVPSTELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYANAFLGFGPEDSQFVVELTYNYGVDKYDIGTGFGHFAIATQDVYKLVEHIKAKGGTITREPGPVKGGSTVIAFAKDPDGYLFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMRLLKKTDRPEQKYTIAMMGYADEYETIALELTYNYGVSEYTKGNAYAQVSLMLHRFIHILLCVINYIFSLWMLSVFQIAIST...

XP_057764907.1
MAEGATPVVPSTELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYANAFLGFGPEDSQFVVELTYNYGVDKYDIGTGFGHFAIATQDVYKLVEHIKAKGGTITREPGPVKGGSTVIAFAKDPDGYLFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMRLLKKTDRPEQKYTIAMMGYADEYETIALELTYNYGVSEYTKGNAYAQIAISTDDVYKSAEVVNVVIQELGGQITRQPGPIP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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