Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G001452`

染色体: Chr05 坐标: 13264523-13269250 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G001452`
名称	SmilChr05G001452
描述	serine/threonine-protein kinase D6PKL2-like
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	13264523 - 13269250 / `-`

ID 对照

NCBI Gene ID	`LOC130986143`
GeneID	`130986143`
locus_tag	`-`
NCBI Name	`LOC130986143`
原始查询	`LOC130986143`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	serine/threonine-protein kinase D6PKL2-like
产物	serine/threonine-protein kinase D6PKL2-like
Arabidopsis	`AT5G47750` (D6PKL2) D6 protein kinase like 2 [Source:NCBI gene (formerly Entrezgene);Acc:834826] identity=83.1; qcov=0.846; evalue=0; confidence=high
Rice	`Os09g0258500` - identity=78.9; qcov=0.858; evalue=0; confidence=high
GO	GO:0004674 (protein serine/threonine kinase activity); GO:0005524 (ATP binding); GO:0005634 (nucleus); GO:0005737 (cytoplasm); GO:0005886 (plasma membrane); GO:0006468 (protein phosphorylation)
KEGG	-
Pfam	PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:130986143

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057765410.1`
2	Cytosol	细胞质基质	0.80000	`XP_057765410.1`
3	Nucleus	细胞核	0.20000	`XP_057765410.1`
4	Chromosome	染色体	0.00000	`XP_057765410.1`
5	Centromere	着丝粒	0.00000	`XP_057765410.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:13264751`	`TCA`	`T`	2bp_deletion	frameshift_variant	1	B49
`Chr5:13264751`	`TCA`	`T`	2bp_deletion	CDS_variant	1	B49
`Chr5:13264774`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr5:13264819`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D4
`Chr5:13264865`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C39
`Chr5:13264867`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B13,B135,B40,B49,C62
`Chr5:13264897`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D8
`Chr5:13265348`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C52
`Chr5:13265368`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B137,B28,B8,C15,D10
`Chr5:13265384`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B35,B61,B8,C71
`Chr5:13265385`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B86,D4
`Chr5:13265512`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A1,A2,B14,B35,C71

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057765410.1

586 aa

293

586

PK_Tyr_Ser-Thr

Pkinase

PK_Tyr_Ser-Thr

PF07714 PK_Tyr_Ser-Thr 193-342 aa PF00069 Pkinase 193-343 aa PF00069 Pkinase 426-529 aa PF07714 PK_Tyr_Ser-Thr 433-517 aa

XP_057765411.1

586 aa

293

586

PK_Tyr_Ser-Thr

Pkinase

PK_Tyr_Ser-Thr

PF07714 PK_Tyr_Ser-Thr 193-342 aa PF00069 Pkinase 193-343 aa PF00069 Pkinase 426-529 aa PF07714 PK_Tyr_Ser-Thr 433-517 aa

XP_057765412.1

586 aa

293

586

PK_Tyr_Ser-Thr

Pkinase

PK_Tyr_Ser-Thr

PF07714 PK_Tyr_Ser-Thr 193-342 aa PF00069 Pkinase 193-343 aa PF00069 Pkinase 426-529 aa PF07714 PK_Tyr_Ser-Thr 433-517 aa

XP_057765413.1

586 aa

293

586

PK_Tyr_Ser-Thr

Pkinase

PK_Tyr_Ser-Thr

PF07714 PK_Tyr_Ser-Thr 193-342 aa PF00069 Pkinase 193-343 aa PF00069 Pkinase 426-529 aa PF07714 PK_Tyr_Ser-Thr 433-517 aa

XP_057765414.1

586 aa

293

586

PK_Tyr_Ser-Thr

Pkinase

PK_Tyr_Ser-Thr

PF07714 PK_Tyr_Ser-Thr 193-342 aa PF00069 Pkinase 193-343 aa PF00069 Pkinase 426-529 aa PF07714 PK_Tyr_Ser-Thr 433-517 aa

XP_057765415.1

586 aa

293

586

PK_Tyr_Ser-Thr

Pkinase

PK_Tyr_Ser-Thr

PF07714 PK_Tyr_Ser-Thr 193-342 aa PF00069 Pkinase 193-343 aa PF00069 Pkinase 426-529 aa PF07714 PK_Tyr_Ser-Thr 433-517 aa

XP_057765416.1

586 aa

293

586

PK_Tyr_Ser-Thr

Pkinase

PK_Tyr_Ser-Thr

PF07714 PK_Tyr_Ser-Thr 193-342 aa PF00069 Pkinase 193-343 aa PF00069 Pkinase 426-529 aa PF07714 PK_Tyr_Ser-Thr 433-517 aa

XP_057765417.1

586 aa

293

586

PK_Tyr_Ser-Thr

Pkinase

PK_Tyr_Ser-Thr

PF07714 PK_Tyr_Ser-Thr 193-342 aa PF00069 Pkinase 193-343 aa PF00069 Pkinase 426-529 aa PF07714 PK_Tyr_Ser-Thr 433-517 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057765410.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	193	342	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765410.1`	Pfam	`PF00069`	Pkinase	Domain	193	343	1.3e-58	199.2	Protein kinase domain
`XP_057765410.1`	Pfam	`PF00069`	Pkinase	Domain	426	529	1.3e-58	199.2	Protein kinase domain
`XP_057765410.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	433	517	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765411.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	193	342	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765411.1`	Pfam	`PF00069`	Pkinase	Domain	193	343	1.3e-58	199.2	Protein kinase domain
`XP_057765411.1`	Pfam	`PF00069`	Pkinase	Domain	426	529	1.3e-58	199.2	Protein kinase domain
`XP_057765411.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	433	517	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765412.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	193	342	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765412.1`	Pfam	`PF00069`	Pkinase	Domain	193	343	1.3e-58	199.2	Protein kinase domain
`XP_057765412.1`	Pfam	`PF00069`	Pkinase	Domain	426	529	1.3e-58	199.2	Protein kinase domain
`XP_057765412.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	433	517	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765413.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	193	342	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765413.1`	Pfam	`PF00069`	Pkinase	Domain	193	343	1.3e-58	199.2	Protein kinase domain
`XP_057765413.1`	Pfam	`PF00069`	Pkinase	Domain	426	529	1.3e-58	199.2	Protein kinase domain
`XP_057765413.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	433	517	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765414.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	193	342	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765414.1`	Pfam	`PF00069`	Pkinase	Domain	193	343	1.3e-58	199.2	Protein kinase domain
`XP_057765414.1`	Pfam	`PF00069`	Pkinase	Domain	426	529	1.3e-58	199.2	Protein kinase domain
`XP_057765414.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	433	517	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765415.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	193	342	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765415.1`	Pfam	`PF00069`	Pkinase	Domain	193	343	1.3e-58	199.2	Protein kinase domain
`XP_057765415.1`	Pfam	`PF00069`	Pkinase	Domain	426	529	1.3e-58	199.2	Protein kinase domain
`XP_057765415.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	433	517	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765416.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	193	342	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765416.1`	Pfam	`PF00069`	Pkinase	Domain	193	343	1.3e-58	199.2	Protein kinase domain
`XP_057765416.1`	Pfam	`PF00069`	Pkinase	Domain	426	529	1.3e-58	199.2	Protein kinase domain
`XP_057765416.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	433	517	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765417.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	193	342	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase
`XP_057765417.1`	Pfam	`PF00069`	Pkinase	Domain	193	343	1.3e-58	199.2	Protein kinase domain
`XP_057765417.1`	Pfam	`PF00069`	Pkinase	Domain	426	529	1.3e-58	199.2	Protein kinase domain
`XP_057765417.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	433	517	1.1e-27	97.7	Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

8 records

下载 cDNA FASTA

XM_057909434.1
TGCTCCATTCATGATTCTTTCTACTGATTACTATTCTCCTACTTATTTAGAAAGTCTTGTTCCGGCAAACGTCTCCTCCTCTTTCATAATTTAATAACAAGAAGATGAAAAAGAAAAATTACCGACCCCTACCCCTATCGATTATATTTTTCTTAATTTGTGCCGATCCAAAAGATGGTGATGCTTGATTTCGATACTGAAAGGGCAGATGGCTTGTGTTCCGGCCCTATGTGATGGCTCCGTTCAATCTGTTTGATTAC...

XM_057909433.1
TAATCTGGGACCGTATGCTCATAATTCACTCAAATAGTAGCTTTGTTTTTTTTATTATTGCAATTTTAAGGAAGAAAATGATAGCTGCGACTTGAGAATTAAAATAAGAGATGATAAAAGTTGAAGAGAGAGAAGAAATTAGTAATGGTTTTAATGGGAAAATTGATGAGCATGAGAGACAGGTTGGAGTATTTGAAGGTCCTTTTGTTGTCCACAGACCCTTGTATTTTCTGACAAAATTCATTGGAATCATTGAACAT...

CDS

8 records

下载 CDS FASTA

LOC130986143
ATGGCCTCAGAATCATATATCAAGGGTTCCTCAGGAAAGCAAAGCAAAAGTCGTGGAGGGTGTAAAACAGGAAAATTGGACCCTCTTATGAAAGATTTACCCGGTCATGTGGAAAGTCTTGCCTCAAAGAAAATTACAACAGAAGCTATAGAAGAAAAGAAATCAAACAATCATCTGCAGAAGGGGGGCGTTTCGTCTTTGACAGATAAAATTGATTCAAGCTTACATTTGGGTAATGCTAAACAAGCACGGACGTTGGA...

Protein

8 records

下载 Protein FASTA

XP_057765410.1
MASESYIKGSSGKQSKSRGGCKTGKLDPLMKDLPGHVESLASKKITTEAIEEKKSNNHLQKGGVSSLTDKIDSSLHLGNAKQARTLEQTADQETKTSDLGNVKDRSASVKVSDGASSLAKASGSAKISDRADFVESGKSSLCRGSTSTDVSDESTCSSFSSAVNKPHKANDLRWEAIQAVRAKDGALDLRHFRLLKKLGCGDIGSVYLSELCGTKCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFE...

XP_057765411.1
MASESYIKGSSGKQSKSRGGCKTGKLDPLMKDLPGHVESLASKKITTEAIEEKKSNNHLQKGGVSSLTDKIDSSLHLGNAKQARTLEQTADQETKTSDLGNVKDRSASVKVSDGASSLAKASGSAKISDRADFVESGKSSLCRGSTSTDVSDESTCSSFSSAVNKPHKANDLRWEAIQAVRAKDGALDLRHFRLLKKLGCGDIGSVYLSELCGTKCYFAMKVMDKASLASRKKLLRAQTEREILQSLDHPFLPTLYTHFE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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